Cten003902.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- bab1
- Assembly
- GCA_963573255.1
- Location
- OY754302.1:42359587-42361085[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-18 1.4e-14 53.7 0.0 1 43 27 70 27 72 0.95
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGCTGGAACAGTCAGAACCTTATTCAACACATGCGATTTCGAGAACGTGGTCCACTAAAATCCTGGCGTCCAGAGACAATGGCAGAGGCTATATTTAGTGTATTAAAGGAAGGTCTTTCACTTTCTCAAGCAGCTAGAAAATACGATATTCCATATCCAACATTTGTTCTCTATGCAAATCGAGTGCATAATATGCTTGGACCGTCTATGGATGGTGGAACTGATTTACGACCAAAAGGCAGAGGGAGACCTCAAAGAATTTTACTCGGTATATGGCCTGATGAGCACATCAAAGGAGTTATTAAGAGCGTAGTTTTTCGTGATGAAAAGAACATGAAGGAAGAGCAAATGATATACGGAAGACAGTCGCCATTTCCCTTCCAAGATGCACAGCTAGGTTATCCAAATGGCTTAAATCCTCAAGCAACAGACTCAATGTCACCGGATCTCCTCGCCGCCGTACGTCAACAAATGTGCAATATGGTCGACGCAGCAAATTTCGTTGCTGGCTTCAATTTACCACCGAACATGACAATTCAATCGATGACACCGACACTCGGTGGAAATTCGAGTAGCAATATACCAAATCCAAAAGTCGGATCACCTGCAATGAGTTGTAATCAATTGAATAAGAATGGTGGTGAACCAAGTAATGTGCTTCAAATGCCACGACTTGGATCACCAGCACTTCATAATTTACCGACGGAATTGTCACTGCATGGATTGCAGAATTTATCACCAAATGATGAGAATGAGTATCGCAAACAGGAGAAAGCGATGCGATTACGGAAGTCATTAGATGAGGAATTTGAGGATCAGCATCAAAAAGGATTAAATAATAACCGATTGTGTATAACGAAAATGAATTCACCAAAAAGTCAGAGTAAAACTCCGTCAATTGAGGCACTCGAACCGGCTGTAAACCTTGCAATTAGCAGTCAATCACTAGATATGTCATACAAGTCATCGCGGAACAGCAGTGACGGTAGTGTGAATGGTGAGGACATCACACGATCGTTTCGTAATGCTGCCGTAAATCTTGGATTTAAAGACTCGTCACCGATTAAGTTAGAACCACTCGCCGATTGCCGTgaataa
- Protein Sequence
- MWQKCWNSQNLIQHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSMDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKSVVFRDEKNMKEEQMIYGRQSPFPFQDAQLGYPNGLNPQATDSMSPDLLAAVRQQMCNMVDAANFVAGFNLPPNMTIQSMTPTLGGNSSSNIPNPKVGSPAMSCNQLNKNGGEPSNVLQMPRLGSPALHNLPTELSLHGLQNLSPNDENEYRKQEKAMRLRKSLDEEFEDQHQKGLNNNRLCITKMNSPKSQSKTPSIEALEPAVNLAISSQSLDMSYKSSRNSSDGSVNGEDITRSFRNAAVNLGFKDSSPIKLEPLADCRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250009; iTF_00319616;
- 90% Identity
- iTF_00319616;
- 80% Identity
- -