Crip009821.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- gata6-b
- Assembly
- GCA_001014505.1
- Location
- JXPV01017404.1:4262-6377[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-13 4.8e-10 38.9 3.6 1 35 426 460 426 461 0.92
Sequence Information
- Coding Sequence
- ATGCTTAATTCTTCATTTGTCTTTAAGTATTTTATGAATAGTCTATTTTTACATCTTCAGATGGACACACAACAGCCTGAAATTGTTGAACAAAAGAACGAAAGTGTAACCGTTGAGCGTGTTATGATTGCAGAAGGAAATGAGGCGgtgaaagttgaaaaaatagcCAAAGATCCTGTGAGTATAATTCCAATTGTGTCATCACAAGAGCCACCGTCATCAGTGCAAGAGACAATCGTGTCAAGTCCTCAAAATTTACCAACAACGACGGTGATTTCAACAAGACAACGAATGATTACAACACAGGGACATATTCGTGAGATTTCAGTGACACAATCACATGAAGTGCCAGAACAATACGAACAATATCAAATCACTGCATCTGGTGatgatcaaaatgtttataCATATGAGCCATCGTCCACAGGAATTATTACAATTAATCAGCCTGAAAATCTTCAAACGACTGGAATTTTAAAGCgtgatattttaattgaaaaggaaCATCCAGGGATTTCAGGACCGACAATTAATGTCGTTAGTGCTGAACCGCAAACAGTTTatgtggaattaaaaaataatggtGAGGAACAGAGATACATAACAAATCCAACAATCCGATATGAAGCACCTGAGCGGTATCATCGATTTGCTTACCACGGAATACCAACACACAATCCACACCTACAGCATCAACGAGAAGTAGCTCTTAAATCAGAAGGACCCCAACATCCACCGCCTCCACCTCAAGAGCTTCAAATTTATGAAGCTGAACATGGAGCTCCAAGTCATGCACAGCAGTCAGGTGAACAAAGTACAATTTCCTCCGAACAACAAAATGAACCAAAGGCACATTATACGAATTTGGAGCCGGTTGCGTCTTCTCagagttcttattatttgaCATCTGAAAGTTATCAACCTTCTAATAGCAATAGCTTTACTTACTTACCTACAACGACTTCGAAGGATGGTCCTTATATATATCATCCTAATAGTCCTGTGCTGTACAAAACAAAACATCAACCAACACATTATACACAAGTTTATGAGAATAATTCAATGCAAACGTCACCGCCTCAAGTATATTATAAATCTGATGGACAATACGGATGGCCAGGAGCTATAGATTATAATCCAGGCTTTGGTGGCACAATCATCGTAGAAAATCCCCAATCCGATTACCTTGCAAATGGTCACCATCAATGGCCGATTGGTGCAGCAATTGCTGCTGAGTCGTATGATCCCACAATCATACCAAATGATGTGCGAGAGTGTGTTAATTGCGCGAGTTCTGATACACCATTATGGCGACGTGATATGGCCACAGGACATAATTTGTGCAATCGATGTGCATTGTATAATAAGCAGAATAATGTTCCACGACCACCAAATCGAATTCCGAAAGCTAAAGCGCCGTCAGCtgtaattatcaattttttgcttttttatttttgtgctaTTTGA
- Protein Sequence
- MLNSSFVFKYFMNSLFLHLQMDTQQPEIVEQKNESVTVERVMIAEGNEAVKVEKIAKDPVSIIPIVSSQEPPSSVQETIVSSPQNLPTTTVISTRQRMITTQGHIREISVTQSHEVPEQYEQYQITASGDDQNVYTYEPSSTGIITINQPENLQTTGILKRDILIEKEHPGISGPTINVVSAEPQTVYVELKNNGEEQRYITNPTIRYEAPERYHRFAYHGIPTHNPHLQHQREVALKSEGPQHPPPPPQELQIYEAEHGAPSHAQQSGEQSTISSEQQNEPKAHYTNLEPVASSQSSYYLTSESYQPSNSNSFTYLPTTTSKDGPYIYHPNSPVLYKTKHQPTHYTQVYENNSMQTSPPQVYYKSDGQYGWPGAIDYNPGFGGTIIVENPQSDYLANGHHQWPIGAAIAAESYDPTIIPNDVRECVNCASSDTPLWRRDMATGHNLCNRCALYNKQNNVPRPPNRIPKAKAPSAVIINFLLFYFCAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -