Basic Information

Insect: Chironomus riparius
Gene Symbol: hang
Assembly: GCA_001014505.1
Location: JXPV01003298.1:4116-24301[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0066 0.4 11.3 0.8 3 23 280 301 279 301 0.95

2 19 0.32 19 6.0 0.5 2 21 407 426 407 427 0.93

3 19 0.027 1.6 9.4 0.2 1 23 469 492 469 492 0.94

4 19 0.07 4.2 8.1 0.1 2 23 533 555 532 555 0.88

5 19 0.003 0.18 12.4 0.7 2 23 592 614 591 614 0.94

6 19 0.0059 0.35 11.5 0.4 1 23 622 646 622 646 0.95

7 19 0.29 18 6.1 0.0 1 23 672 697 672 697 0.93

8 19 0.0023 0.14 12.8 0.6 1 23 761 784 761 784 0.97

9 19 0.83 50 4.7 0.5 2 20 792 810 791 814 0.93

10 19 0.00019 0.012 16.1 1.8 1 23 865 888 865 888 0.98

11 19 7.2e-05 0.0043 17.5 3.6 1 23 934 956 934 956 0.98

12 19 0.00058 0.035 14.6 2.5 1 23 969 992 969 992 0.96

13 19 0.001 0.062 13.9 0.2 2 23 1000 1022 999 1022 0.94

14 19 8.3e-05 0.005 17.3 0.4 1 23 1094 1116 1094 1116 0.93

15 19 0.00019 0.011 16.2 1.9 2 23 1167 1189 1167 1189 0.94

16 19 0.47 28 5.5 0.0 2 20 1209 1227 1209 1229 0.90

17 19 0.00025 0.015 15.8 0.4 2 23 1247 1268 1246 1268 0.96

18 19 0.0035 0.21 12.2 0.1 1 23 1329 1351 1329 1351 0.95

19 19 0.011 0.66 10.6 4.1 1 23 1510 1533 1510 1533 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0066	0.4	11.3	0.8	3	23	280	301	279	301	0.95
2	19	0.32	19	6.0	0.5	2	21	407	426	407	427	0.93
3	19	0.027	1.6	9.4	0.2	1	23	469	492	469	492	0.94
4	19	0.07	4.2	8.1	0.1	2	23	533	555	532	555	0.88
5	19	0.003	0.18	12.4	0.7	2	23	592	614	591	614	0.94
6	19	0.0059	0.35	11.5	0.4	1	23	622	646	622	646	0.95
7	19	0.29	18	6.1	0.0	1	23	672	697	672	697	0.93
8	19	0.0023	0.14	12.8	0.6	1	23	761	784	761	784	0.97
9	19	0.83	50	4.7	0.5	2	20	792	810	791	814	0.93
10	19	0.00019	0.012	16.1	1.8	1	23	865	888	865	888	0.98
11	19	7.2e-05	0.0043	17.5	3.6	1	23	934	956	934	956	0.98
12	19	0.00058	0.035	14.6	2.5	1	23	969	992	969	992	0.96
13	19	0.001	0.062	13.9	0.2	2	23	1000	1022	999	1022	0.94
14	19	8.3e-05	0.005	17.3	0.4	1	23	1094	1116	1094	1116	0.93
15	19	0.00019	0.011	16.2	1.9	2	23	1167	1189	1167	1189	0.94
16	19	0.47	28	5.5	0.0	2	20	1209	1227	1209	1229	0.90
17	19	0.00025	0.015	15.8	0.4	2	23	1247	1268	1246	1268	0.96
18	19	0.0035	0.21	12.2	0.1	1	23	1329	1351	1329	1351	0.95
19	19	0.011	0.66	10.6	4.1	1	23	1510	1533	1510	1533	0.95

Sequence Information

Coding Sequence: ATGGATTCGACAAAATTTAAGAAGCCTGTGTTGATAAGTTCAttaaagaaaaggaagaaaactGTAGCAAGAAACTTAGGACTAGAAGCGATGACACAAAATCGTAATTGTTGTCGCTTGTGCCTGGCACCTCAAAATGAGtgtgttgaaatatttaaaacacaAGCAGCAGATAAGCAGCCGATGcagtcaaaaatttcatcatgtgTACAAATTCAGGTTAGCTTAACAGACCGTTTATCAGTAAACATTTGCCATTCGTGTGtaagttatttaaattcatggcaaagtttcaaaaatcgATGTGATGCAGCTCAGAGGAAGCAAAAAATCTGGCTCTCAACGTCTGGTAGTGATGGAAAAGTACAAAGCACTGGTCAATCATTACTTAAGAATCAATTAAATGGACATGGAAATCAATTGAAACCAGCTCTCGAGAATGCACAACAAAAGTTTCAAGAGAAACAAGCAGAATTACAGAGACGAAAACTACAAGAGCTTGTAAAGCAACAACAATCGAGTGATATGGACACAAGCTTCATTAAGTCTGAACCTGCATCTGATGACGAGGATGAGGAGAATGTTATGGAATTAGATCCCTCACAGTTTTTGGCACAAGGTAGTAGTGATGATGATTCAGAAAATGAAGATTCTCGGAATCAAACACAAAGTCAAAATGGAAACGGTCCTCCAATACTAACATCGCTGGGTCTCACACATATCAACAGTGTATCAAATCCATTTGCATCATATGCCAACTCGGACGATTCAACAAATGATGACAAAAGTGAAATATCGAGTAATGGTGGAAAATCGCATGCCCAAATACCAGCCAATTGTACAGTATGTAATATGCAATTCTCAAATCGTGCCAATGCTCGCCGTCATGAGAAgaacattcataaaataagaGCAACGCCAATTGCACCGATACAATCAGCAAATACATCTTTGAATACATCACAACTAAATACATCAACAGTGTCGACGACTTCAGCTGTAAAAAAGAAACCATTCTCGGTTATAGAAATAGACTATACCAAGCCAGAATTATATCGTCATTTACTCACGCCAACAAAGCTCACATTCATATTAAACAATCTTAATTTCCTCGAGCAAGCACAAGACATGACTTGCAAGTGTTGCAGTAAAAAGTTCCCGAGTTACAAGTTTTTCATGGGTCATATGAGAAAGAAATATCATGGGCTCCCACGCAATGTGTGCTTCAAATGTCTAAAACAATTTGATAGTAAAGGGCAATTTATTGGACATCTTAAAAGACCTGGTGGATCTTGTCCGAATCTTTATCGTATTGTAATGGCTGATGATTCCATTCCAAAGAACCTCATTCCATCAGACACTAACTTAAGAATACCAGCAAAAGATGTACTCAATAATCGAGTCTATGCATGCGCCATTTGTGATGATACATTCCGATTGAAATCTGATTTCCGAGAGCATGTTTATAGTGTGCATTTAGAAGTAACAAAGAATCGAGAAACTCCAAATGCCAGTTGTATAAATTGTAATGAAGCATTTACGGATTCTGCTGTTCGTCGTCGTCACTTCAATAATCTTGACTGTATTGTGTATATTGTATGCAACACCTGTGGTGAGCAGTTTCCATCACAATCTGTTTATCTTGATCACGTATATCAGACACACTTGAATTCCAAGGCACAAGAAAATGCCGAAGAAACGATACTTTTTGAAGAAGCACCCGAGGACCAATCACAGTCAACCGCAATATCACCAGCAAacaaaagtattcaaaaatgtCCAGTTTGTTTTAAgcaatataataattattataatgtgTTACGTCATATGGAAGCTAAGCACCCAGATCAAGTTCCTCAAACATATCAATGTCCCGAATGTCCAAATGAGAAATTCAGCAAACAAACTTATTTACGTGAGCATTTAGTGAAAGTTCATAATAAAGTTGATGTCTCACCACGACAATTGATGCAGCATCAAATTGCCAATAGTAGCTTACAAAAGATTCCTGCATATACATGCAAAGCTCCAGATTGCGGAATAGAGTTCGGAGAGAGAGACAAATGGCTTGATCATCAAGAAGAAGTACATGGTGGAAAATTCTGGTGTATGTTTTGTGAGCATCATGAGTCCGAGACCGATCAACGTGACGCATTTGAAAAGCATTTGGAAATgactcatcaaaattcaaacaaaccACAGCTAATGGTCAATGGAAATGAGTCGGATGATGAAACAACAGCCACAAAACTGGACCAATCATCGGATGCGACAAAATCATACAAATGTCGATTATGTGCAAAACGTATTGCAACAAAAACTGGACTTCAAAAACATATGATTAAAGTTCATAATGTTGGCGGTGAGCTGGTAAAATGTACTCTATGTCCAGCAGATTTTGCAAATGACAAAGGTCTTAAAGTTCATTTGTGGCGTTGTCATGAAATTCGTGAGGCagattatgaaaatgttttgccTCCTGATCTTTTGGATCCATATACACAACAACAGAGAAAGCTAAAACAAGAGGAAGAACAAAAAGCAATTATGATGGCAAATGAGAGTGGAAGCATCGCTAAAAAGCGAACAGTTTATGAATGTCCATTCTGTCACATAGTCTATCATTCAAAAGATGAATTAATTGATCATCAAAAGACAGTTCATGCTATGGACGATCCTGATATTTTAGATCCGGATGATTTCGTACAACAAGATTATTCAGACACGAATGATGACACGAAAGATATTCAAggtgatgaaaatgatatgACTATACACGAAGAAGAAGCTGAATACTGGTTCCAATGTCGTTTTTGTCAGCGATCATTCAATTCCAGCAAGAAGCTTACAATTCACATGAACAGCCATCAAGAAAGTACGAGTGGTCAAGATGAGAACGGTGGATATCCATGTAAGGAATGTAATATTGTCTACAAATCTAAGAAATCATTGTGGGTGCATCGTCATAAAAAACATCCACGTCATCCGGTTCCATCACCGTGTGATTCATGTGAAAAGACATTCTTTGATCGCAACGAATTGATAATACATATGCAGCAAGCCCATCCTGGAAGTATTCCGACTCTGCCAAATGATTCacaaaaagagaatgaaaatgatggaaaCGTGAATGAATCATCACTATTCACTGAAGGTCACTGGTTACTGGATTCATCAACAGAAACTAATCAAATGAAAGCACCTCAAATGCCGGAccaaaattcattattaccaaagaaaagaaaacgtCCAGCACCATCAGAGACACCTGACGGACAGTTCGCTTGTGATATGTGTCCAAAATGCTTCTCAAATGCTAACGCTTTGCAAGTCCATCGTGGTTGGCACTTCCGCTCACCTGATGGACGTAAAGTCAAAGATCCATCACAAATGTGGCATCCTGATCAAGTTCCACCAAGTAAAGTAAGACGTACAGCAACTCCATCtaattcatcatcaacttcTCCTGCCCCATTGACAAACAATGTCATAGTTCCTACATGTCCTCATTGTAATGCTAAATTTGCTTCACATAATAATTTACGTCGTCACATAATTGAAGTACATAAAACGCGCGATTCtacaaattctaatgaaaatgaagttaaaGTCGACCGAGTTGGTGAATGTACAAAGTGTGATGTTATGTTCAATACATTAGCTGAATGGGTTGAccacaaaattaatgatgctAAAAATAGAAAGACAATAGCTGGTCAGCAAGCTGGTTACGAATGGAACTGTGAGATTTGTTTAAAGCCATTCACAAGACGCGAACGACTAATGCAGCATATGCTTAGTCATTTAAATGACAAACAAATGGACCCAGAAGTATTAGCTGAACATCAAATAAGGTTAGATAATAAAGTGAGCAATGGACAAAAATTACAGCATGATGATTTAAGTAGTGGAAGTGAGCCTGAAGACGATGACGATGAACAATCggataatgaagaagaagatgatgcAAAAATGCCACAGTCATTTAGCTGTGAATTATGCAGTGTGATATTTTCGTCATCACAAGAATTAAGATCTCACGTTGCAGAGCATTTCCTAAATGGATCAGGAGGACTTTCCACAACGACACcaacaaaatcaattgaaaatcatgAGGAAAATAGCAACAAATTAGACATTGATGAAGATGTAGAGCGTGAGTTAAATGATGTAGAATTTGAGGAAGCAGAAGTCGATTTCGATAATCCAAATGAAGACGAAGACGAAGATGATGTGGAGGAAGAAGAGGATGAGGATGGTTATGAAGAAAATGGCgaaaatgagaatgatgaaaatgacgAAAACGAGGAAGTTGATGAGAATGATGAAAACGATGAAAATTCAGACTCTTCAGGCACTTCGTCATCGCTCTCAAATCAACCAACAAAAGTTTCACAACAACAACCACAGCCACCTATTGGACGTATACAAGTCCAACTTCATCGATGTCGTGTCTGTAATGCAGCATATATCGATCAATACAAGTCTGTAGAATGCATGGTGTCACATCAAAATCGCAATACACCTTACAAGTGTTCCGACtgtcaactttattttaaagatacaAAGCAACTTAAAGATCACGAGAACTTGTGCCATgcataa
Protein Sequence: MDSTKFKKPVLISSLKKRKKTVARNLGLEAMTQNRNCCRLCLAPQNECVEIFKTQAADKQPMQSKISSCVQIQVSLTDRLSVNICHSCVSYLNSWQSFKNRCDAAQRKQKIWLSTSGSDGKVQSTGQSLLKNQLNGHGNQLKPALENAQQKFQEKQAELQRRKLQELVKQQQSSDMDTSFIKSEPASDDEDEENVMELDPSQFLAQGSSDDDSENEDSRNQTQSQNGNGPPILTSLGLTHINSVSNPFASYANSDDSTNDDKSEISSNGGKSHAQIPANCTVCNMQFSNRANARRHEKNIHKIRATPIAPIQSANTSLNTSQLNTSTVSTTSAVKKKPFSVIEIDYTKPELYRHLLTPTKLTFILNNLNFLEQAQDMTCKCCSKKFPSYKFFMGHMRKKYHGLPRNVCFKCLKQFDSKGQFIGHLKRPGGSCPNLYRIVMADDSIPKNLIPSDTNLRIPAKDVLNNRVYACAICDDTFRLKSDFREHVYSVHLEVTKNRETPNASCINCNEAFTDSAVRRRHFNNLDCIVYIVCNTCGEQFPSQSVYLDHVYQTHLNSKAQENAEETILFEEAPEDQSQSTAISPANKSIQKCPVCFKQYNNYYNVLRHMEAKHPDQVPQTYQCPECPNEKFSKQTYLREHLVKVHNKVDVSPRQLMQHQIANSSLQKIPAYTCKAPDCGIEFGERDKWLDHQEEVHGGKFWCMFCEHHESETDQRDAFEKHLEMTHQNSNKPQLMVNGNESDDETTATKLDQSSDATKSYKCRLCAKRIATKTGLQKHMIKVHNVGGELVKCTLCPADFANDKGLKVHLWRCHEIREADYENVLPPDLLDPYTQQQRKLKQEEEQKAIMMANESGSIAKKRTVYECPFCHIVYHSKDELIDHQKTVHAMDDPDILDPDDFVQQDYSDTNDDTKDIQGDENDMTIHEEEAEYWFQCRFCQRSFNSSKKLTIHMNSHQESTSGQDENGGYPCKECNIVYKSKKSLWVHRHKKHPRHPVPSPCDSCEKTFFDRNELIIHMQQAHPGSIPTLPNDSQKENENDGNVNESSLFTEGHWLLDSSTETNQMKAPQMPDQNSLLPKKRKRPAPSETPDGQFACDMCPKCFSNANALQVHRGWHFRSPDGRKVKDPSQMWHPDQVPPSKVRRTATPSNSSSTSPAPLTNNVIVPTCPHCNAKFASHNNLRRHIIEVHKTRDSTNSNENEVKVDRVGECTKCDVMFNTLAEWVDHKINDAKNRKTIAGQQAGYEWNCEICLKPFTRRERLMQHMLSHLNDKQMDPEVLAEHQIRLDNKVSNGQKLQHDDLSSGSEPEDDDDEQSDNEEEDDAKMPQSFSCELCSVIFSSSQELRSHVAEHFLNGSGGLSTTTPTKSIENHEENSNKLDIDEDVERELNDVEFEEAEVDFDNPNEDEDEDDVEEEEDEDGYEENGENENDENDENEEVDENDENDENSDSSGTSSSLSNQPTKVSQQQPQPPIGRIQVQLHRCRVCNAAYIDQYKSVECMVSHQNRNTPYKCSDCQLYFKDTKQLKDHENLCHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00320914;
90% Identity: iTF_00320914;
80% Identity: -