Crip000991.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- CSRNP3
- Assembly
- GCA_001014505.1
- Location
- JXPV01002855.1:596-3891[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.043 8.2e+02 -0.2 2.9 64 113 151 199 103 221 0.63 2 3 7.4e-91 1.4e-86 290.0 14.1 1 218 268 474 268 474 0.89 3 3 0.1 1.9e+03 -1.4 0.4 15 90 625 698 615 729 0.53
Sequence Information
- Coding Sequence
- ATGCTTAAGCCTATCAAAACTTTCTTTAACTATTTACAGAAGAATGCAAACACGTCAAATATTTTCAGGTTTTCAAATGATATGAATATGTCGGATGAAATAAACTCTTCACCTAATGAAGGTGACAATACTGCCTTTGAAGATCCATTGACTGACCCGCTTgcaattgatgatgaatatgGAGTAAATAGTGATGAGAACATTTTGCATATTGATAACACTAGAGTAGATGATTTTGTATTTGTTGATatagaaaaacttaaaaacaattcaaacaGTGTTGTCAAAAGGGAGTCTATAGGaataaaactcaaaagttcaaaacataTAGAACTTAGTGacataaatggaaataaaaagcaaataatcGATGACTTAAAAGTGAATAGTcttaaaagtgataaaaaagaagaatcagATATAATAGAGGtttctcaaaaattagaaTCTAGTGATAGAAGTGAATtgagaagtagaaaaaatgtatcaataaataaagttattgaTGATTGCGATTCTCTTACAAATGAGAAAGTCAAATCAAGTTCCATAAAGGACaatgatataaataaaaatattgacaatatttcatttgtgATAAGTGCTACATCGAGTGTTTCAGATGAAACTGAAGAAACAATAGATACATCTGAAGTACGAAGTGATGGTTCAGATTCTGGTCTTGGTTTAGATATTTTACGTAATATTTCaatgattgaaaaatctttagcTGTATTAACACCTTCTAAAAGTAGCTTAAAAAGACGATCATCTGAATTACTGCATGATGAACagtcaaaaaaacaaaaacaaggGATTAATTTCGGTAATGTTACCGTTTATTATTTTCCTAGATGTCAGGGCTTCGGATGTGTTCCAACTCAAGGAGGAAGTACTTTAGGAATGACTGCAAAGCATTCATATAAAAAaacaTTTTCATTGAGCGAACATACTTTAGAGCAAAGAAGATTAAATCGACTAAAAATAGCTGGGAGTGAATTTAATCATTGTAGTTCTTCTAGTGACGAGTCAAAAAGTGACGATGAAATAAGTGAAAATAGCTTATCAGAAGCTGACAGTGAAGCATATGGATTTTTACAACCTATCACAGCCCGCCAACGAAGAGCATTGTTAAAAAATGCAGGAGTTAGAAAAATTGATACCACTGAAAAAGATGAATGTAGACAACTTCGATCATCTCGTGAGATTTGTGGATGTAGCTGCCGAGGATTTTGTGATCCAGATACTTGTGAATGCAGTTTAGCGGGAATAAAATGTCAAGTTGATCGCTTAAAACCACATGAGTTTCCTTGTGGTTGTACGCGAGACGGTTGTGCAAACGTAAATGGAAGAGTCGAATTTAATCCTTCTAGAGTAAAAACACATTTCATTCATACAATCATGAGACTGGAACTGGAAAAACGACAAGAGCTTTCAGAAGACTCCAAAACAAACATCATTCCATCGCTTCCACCAGCAAAATGGTGGATGCGTCTTCAATCGACACAACCAAATAGTAATACAAGCACTAACTACAATAGCTACGTTTACAATAACGGAATATCCTCAAATCAATATTCTGGAAAAATTCCATCTTTATCAATGATGTCTGCATCAATGGCAAATCAAGAATCAATTGATTTACATTTTGCTTATCGTGATGAgtacataaataattcaacgCTTAATACAGATACCAATAATAGTTCCTTTAACAGCAACTCTAACGATTATTTTTCTGGTTATAATTATTTGAGTACTACAGGATCAATATCACCTAATAATGCTGTGCATTGTGGATTCTCTTCAAATAGTTATTCTTACAACCAACATTATACAGATCTGCATAGGCAGAATAATATGacacaattgaatttttcaacagactgtcaatattcaaattttccagcAAATAATGGATCATCATTAAGCTATAAGGCAAATTCTGCAAGTGAAACTAATGAAATAACTTCAATAAACTATGTAGCAAATAACTTTTCATCGCCAATACAAAATGGTGCCGCAACCAGCAGAGTCAGTTATCAAAATATAACTTCATCACAATcacaagaaatttcaaataattcggaaaatttttgttctagTACTCAAAATGTTAATAGGGCCAGTTGCATTGGATTAGAACCAACAACTTcgaaaattgatcaaaatgattcTAATGAAAAACTTACCGAAATTATTAACAAATCAATTGTAGAATCAGTAACAgcataa
- Protein Sequence
- MLKPIKTFFNYLQKNANTSNIFRFSNDMNMSDEINSSPNEGDNTAFEDPLTDPLAIDDEYGVNSDENILHIDNTRVDDFVFVDIEKLKNNSNSVVKRESIGIKLKSSKHIELSDINGNKKQIIDDLKVNSLKSDKKEESDIIEVSQKLESSDRSELRSRKNVSINKVIDDCDSLTNEKVKSSSIKDNDINKNIDNISFVISATSSVSDETEETIDTSEVRSDGSDSGLGLDILRNISMIEKSLAVLTPSKSSLKRRSSELLHDEQSKKQKQGINFGNVTVYYFPRCQGFGCVPTQGGSTLGMTAKHSYKKTFSLSEHTLEQRRLNRLKIAGSEFNHCSSSSDESKSDDEISENSLSEADSEAYGFLQPITARQRRALLKNAGVRKIDTTEKDECRQLRSSREICGCSCRGFCDPDTCECSLAGIKCQVDRLKPHEFPCGCTRDGCANVNGRVEFNPSRVKTHFIHTIMRLELEKRQELSEDSKTNIIPSLPPAKWWMRLQSTQPNSNTSTNYNSYVYNNGISSNQYSGKIPSLSMMSASMANQESIDLHFAYRDEYINNSTLNTDTNNSSFNSNSNDYFSGYNYLSTTGSISPNNAVHCGFSSNSYSYNQHYTDLHRQNNMTQLNFSTDCQYSNFPANNGSSLSYKANSASETNEITSINYVANNFSSPIQNGAATSRVSYQNITSSQSQEISNNSENFCSSTQNVNRASCIGLEPTTSKIDQNDSNEKLTEIINKSIVESVTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -