Crip018526.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- crm
- Assembly
- GCA_001014505.1
- Location
- JXPV01011172.1:1833-5319[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-08 1.8e-05 24.8 0.2 3 45 69 123 67 124 0.93
Sequence Information
- Coding Sequence
- ATGGAAACGaaaataaactCGAATGAATTGCTGGGAAGTGTTACGCAGGATAGTGTTCGAACAAGTGCTCGTGTTATTCAATCCAAGATTATGCGAATGGATCCTGTGATAACTACGCAAGctgaaaagaaggaagaaaagccaaatgaaataaatacaGTAAATCAACCGAAGACTCCAAGTCAATCGAAACACATTCGAATCCAGTGGACAATGAAAGAGAAGAAATGTTTCTTTGATGCACTTAATGAGCACGGACGtgattttgaacaaatttctCGATTTATTAACCTTAAGATGAAACGAAAAAATCCAACGGAATCGGATTATAAAACTAAAGAACATGTCAGACAACATTACTatcaactttttcaaaaagcatcaaaatatttgaaattttcagatGATGTCAAGAAATTGGCACAAGAACTTTatgtattaattaattatggggaaatgaaaaaaaagcttataATGTCATCTGATAAGAGTTTTCTGAAACTTAGAGATCTCGTTTATAGAGGAAGTGTGACTGTTCGTGTTAAGggaaagaatattaaaattaaaacaccATCATGTCGAGCCTTAAAGAAGCTTAATCAATTGGAGGGTAATAATATTGAGGATATCCAGTTGCCACAACGTATTGATGTCATTGTTCGTCCTTCAAATCAAGAATCATGGGCGTATGTACAACGATTAGCACAAAATCCAAGAATTAAAGTTGCACTTCCACTTCAAAAGAGAATATCATGTCTACTACAGACATTAGAGCAGAAATGGCGACCACAAGATGTAAGATTACATGAGAAGTACGtagtaaaaattattcaacagaATAGTCGTCAAAAATTAAGTGACGAGATTATTGCACAGTCCGAAGACGATGCAAAATTCTTAAAGGCTAAAGAACCtcgactttatttttatccgcctgaaaattgtaaaatatttcgtccaatgattcaattaaatgaatttttaagcagcTATAGTCTATGCTTAAATTCATATGAGGTGAGGATCGGTGCACGAAAACGTGGCGAGGAGATTtgcatggaaaaaaattctcacctTAAAGACATATCGAAAAATTCAGCGAAACGAATACGTAATGATAGTTTCTCGGAAAAGATTAATGCCGTGTCGGATGCTAGGAAGATGAAACCAGATGAAcaaaatgttgatgatttgGGTATAATTTATGAGCATAAAAGTAACGATTCAAATGATTTGAACGAGATTAAAAAAAGGGAAGGAAGCAATGTTATTAAAGTAAGTGATATATCAAATGAGATTGAAAAGCATGAGCCAGTTATTGAAGATAAGAAGGATTCACCTGATATTGAAACAAATAAGGCCTTATCaactaaaaatgaaaattgcaatgtAGTGTCTACAAAAcccaacaaaaaatcaatgctGTGCTCTTCAAAGAATCCTAAAGAATACTCATTTAAGCCATTAATTAACGAGGATACACTTAAGAAAATTCGTCAAGGCTGGAATGTTGACAATGCAAGTGATCTCACGATCGGTGATCTTTATTTAATGTACGGCTCAgactcaaaattatttattgaatataagTGGCATGATccagaaaatttctcaaacaCAACTAACGGCATTTCCTCATCTGAACAAATTAAACTTGAGCCCAATCACATTGGTAGTAAATTAAAGCACTTAATGATGGTTGCGAGTTTGATTGAAAAACCAAATGGAGTTGCAATGCTCAATAATCTTAATTTAGAGAAGAATTTAGTCGACACTAAAGAATTTGGTGAAAGTAGTAATACATTTAAAACTCCGTCTTTTGATACATTTATGCGACCAAATATGAATCCACGATTAAAACCACATCAATCGAAATGGTGGCGAAATCAACATTATCGATATCGACCATTAGACAATGTAAATggaaattactttaaaaataataataacaataataatcaaaatcatGTCGTaagaaatttatatcaaaCGCCTACAACGCAATTAAATAGTTCGCAAACGTCAAGGACCGATGAGGAATTGAGAAGTAGTCCTGTGGATGAAGTCACTAAAATTCTAGAAGacaaaatacaatttatgTCAACTAATCAATCGCAAGTACAAAATTTCTCGGAGAGTTCTCGATCTagtataaaaagtttattagaGACTTTATCAGGAAGTTCAAACAGAACAAATTATGATTATGATTTGAGATTTTGGGACCACGAGAATGAGAGAGGATCAGAGGATTTTGACAATATTTCTCTAAGTAGCCTTTTAGGACATCTCGATTCATTTTATGGTAACAAGAGTCAAGGTGCAACCGATACAGAAGAAAACTTGTAA
- Protein Sequence
- METKINSNELLGSVTQDSVRTSARVIQSKIMRMDPVITTQAEKKEEKPNEINTVNQPKTPSQSKHIRIQWTMKEKKCFFDALNEHGRDFEQISRFINLKMKRKNPTESDYKTKEHVRQHYYQLFQKASKYLKFSDDVKKLAQELYVLINYGEMKKKLIMSSDKSFLKLRDLVYRGSVTVRVKGKNIKIKTPSCRALKKLNQLEGNNIEDIQLPQRIDVIVRPSNQESWAYVQRLAQNPRIKVALPLQKRISCLLQTLEQKWRPQDVRLHEKYVVKIIQQNSRQKLSDEIIAQSEDDAKFLKAKEPRLYFYPPENCKIFRPMIQLNEFLSSYSLCLNSYEVRIGARKRGEEICMEKNSHLKDISKNSAKRIRNDSFSEKINAVSDARKMKPDEQNVDDLGIIYEHKSNDSNDLNEIKKREGSNVIKVSDISNEIEKHEPVIEDKKDSPDIETNKALSTKNENCNVVSTKPNKKSMLCSSKNPKEYSFKPLINEDTLKKIRQGWNVDNASDLTIGDLYLMYGSDSKLFIEYKWHDPENFSNTTNGISSSEQIKLEPNHIGSKLKHLMMVASLIEKPNGVAMLNNLNLEKNLVDTKEFGESSNTFKTPSFDTFMRPNMNPRLKPHQSKWWRNQHYRYRPLDNVNGNYFKNNNNNNNQNHVVRNLYQTPTTQLNSSQTSRTDEELRSSPVDEVTKILEDKIQFMSTNQSQVQNFSESSRSSIKSLLETLSGSSNRTNYDYDLRFWDHENERGSEDFDNISLSSLLGHLDSFYGNKSQGATDTEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320543;
- 90% Identity
- iTF_00320543;
- 80% Identity
- -