Basic Information

Insect: Chironomus riparius
Gene Symbol: SMARCC2_1
Assembly: GCA_001014505.1
Location: JXPV01024793.1:9825-12604[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-13 1.7e-10 40.9 0.2 3 44 629 670 627 672 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-13	1.7e-10	40.9	0.2	3	44	629	670	627	672	0.95

Sequence Information

Coding Sequence: ATGAATTTGGGACCGAAAAAGGATGGAAGTCCGAATGTTGACTTTTTTCAATCGCCCGAGTCACTCCAAGGCTTTGAAACTGTTCGATTATGGCTacaaaaacatcataaaaagTATGTCCAAACAGATCCACCAACTAAGGAAACGCTATCTCAGCTTGTTATACAATTAGTTCAATATCAAGAGACTAAGCTTGGCAAGAATGCTCAAGATTCATCGATGACAACAAGACTTCCGATGCGCTTTTTCTTGGATTTCAAACCTGGTGGAGCTTTATGTATCATATTGTCAACAATGTACCGATTTAAAAGTGAACAACGTTGGAGGAAGTTTGATTTCACAGTAAGCAAGACAACGTCAAAGAAAGATCCAAACATTCAGATGCTCTTAGAAATTGAATCAGCACTGATTGATGCTGAAATCTTTAGATTACCAATCATTTATATTCGACCAGATGTCGATCGTGCATTAGCTGCTAAAATTCGTGAGATTATTACTAATCATCAAGCGGAAATAactgaagaagaagaagatgcaACACATATTGTGCATCCTGATGCTGATCCATTGCCTGAAGAGTATGCACGTCCAATATTCAAACGTGACAAGAATGTATTACTTCATTGGTATTATTTTCCAGAATCTTATGATTCATGGGTTCCAAATAACTTTGATTTACCTGATAATGTCCCTGAATGTCCTGGATCTCCAGCTGAACGTTGGCGTGTATCTGCTCAATGGGTACGTGATTTAGATCAGTACAATGAATGGATGTCTGAAGAAGATTATGAAGTTGATGAGCAAGGCAGAAAGAAAGTACATAAATTAAGGCTTTCCGTTGAAGATTTAATGTCTGCAGAAGGCGATAAATCAAAGAAACAAATGGCATCAAAAGGAAAACGTAAACGATCGCCATCACCGAAAGGACAAAAGAGGAAATCAGGTAGATCGCCTGCTgtttttcaacaaaagaaaactCGTAATGATGACGAAGAATCTGAGGATTTAACGAAAGATTTGGACGATCCACCAGCAGAACCAAATGTTCAAGAAGTTAAGCCATCAGTAAGTAATACAACATCAGGTCCAGCAACTCCAACAATAACTAAACGTGATCCAGATATGGCACCGCTTAAAGGAAGTACAGTTCAAGATCTTGACGAGGAAACGGAACGTGGTGATGATTCACAGACTGGAAAGGCAAGTGAAAACAGCAATACACAAGATTTTGCCAATAAGGATGATGTTGAAGATAATAATGTCACAGAACAAACACATCATATTATTATTCCTTCATATTCAGCATGGTTTGATTACAATTCAATTCATATTGTTGAAAAACGTGCTTTGCCTGAATTCTTTAATGCTAAGAACAAGTCTAAAACGCCTGAAATTTATCTGGCATATCGTAACTTCATGATTGATACGTATCGACTAAATCCAACGGAATATTTGACAAGCACAGCATGTAGACGAAATTTAGCTGGTGATGTTTGTGCAATTATGAGAGTTCATGCATTCTTGGAACAATGgggattaattaattatcaaattgaTGCTGAATCTCGTCCAACAGCTATGGGACCGCCACCAACATCTCATTTCCATGTTTTGAGTGACACACCTTGCGGTTTACAGCcaattaatccacaaaaagtTCCACAACCGTTGGCAGCAAGTAAGGCATTGCTTGATTTAGACAAGAAACCAATAATTGCTGGTAGTGGCGAGAAAAAGGAAGGCGAAAATGGCGTAGTTCCAACAGCAACAGTTAAACAAGAGCCTGGTGAAATTGCACCAGGTGCACAATTTGGTTTAAGACTAGATCAATATATGAAAAAGCCAGCAGCAATGAAGAATAAAACAGCTGCAAGTATGTCACGTGAATGGAATGATCAGGAGACATTACTTTTGCTTGAAGGCTTGGAAATGTATAAAGATGATTGGAATAAAGTTTGTGAACATGTTGGATCAAGGACACAAGACGAATGTATACTTCATTTCTTGAGACTCCCAATTGAGGATCCGTACCTTGAAGATGACAATACATTCTTGGGTCCACTTAGTTATCAACCAATTCCATTTAGTAAAGCAGGAAATCCAATTATGTCAACTGTTGCATTTTTAGCATCTGTTGTTGATCCACGAATAGCTGCAAGTGCTGCAAAAGCAGCTATGGAAGAATTTGCAGCTATTAAGGATGAAGTTCCAGCTTCTATGATGGAtgcacattttaaaaatgtcgaaAAAACAAACTTTGGTGGTAAATTTGATCCATTTGCTGGACTTACAACAAGTGGAATTGCCGGAACTGCTCCTGAGAAagaaaaggatgaaaatgttgaaggCGACAAGGAAAAGACAGGAAGTGAGGATGTAGAAATGAAAGATGCTACAAAGAAAGACTCAGGTATGAAGTTATTTGTATTTATTCTTAGTTGGCGACATTCCTACGCATTATTATTTGCTTTGTTTTGTCCAATTTACTTGATTGACTGGCATTAA
Protein Sequence: MNLGPKKDGSPNVDFFQSPESLQGFETVRLWLQKHHKKYVQTDPPTKETLSQLVIQLVQYQETKLGKNAQDSSMTTRLPMRFFLDFKPGGALCIILSTMYRFKSEQRWRKFDFTVSKTTSKKDPNIQMLLEIESALIDAEIFRLPIIYIRPDVDRALAAKIREIITNHQAEITEEEEDATHIVHPDADPLPEEYARPIFKRDKNVLLHWYYFPESYDSWVPNNFDLPDNVPECPGSPAERWRVSAQWVRDLDQYNEWMSEEDYEVDEQGRKKVHKLRLSVEDLMSAEGDKSKKQMASKGKRKRSPSPKGQKRKSGRSPAVFQQKKTRNDDEESEDLTKDLDDPPAEPNVQEVKPSVSNTTSGPATPTITKRDPDMAPLKGSTVQDLDEETERGDDSQTGKASENSNTQDFANKDDVEDNNVTEQTHHIIIPSYSAWFDYNSIHIVEKRALPEFFNAKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTAMGPPPTSHFHVLSDTPCGLQPINPQKVPQPLAASKALLDLDKKPIIAGSGEKKEGENGVVPTATVKQEPGEIAPGAQFGLRLDQYMKKPAAMKNKTAASMSREWNDQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPASMMDAHFKNVEKTNFGGKFDPFAGLTTSGIAGTAPEKEKDENVEGDKEKTGSEDVEMKDATKKDSGMKLFVFILSWRHSYALLFALFCPIYLIDWH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -