Crip000301.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001014505.1
- Location
- JXPV01008540.1:334-3059[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-17 1.2e-13 50.6 0.0 1 45 16 61 16 61 0.96 2 2 3.9e-19 1.1e-15 57.2 0.0 1 43 430 473 430 475 0.95
Sequence Information
- Coding Sequence
- agaGCAAAGCCACGAATATCGACAATACCAGGACGTCGAACGTATACGGAAGAAGAGCTTAACAATGCATTACAAGATATACTTAGCGGTAAGTTGGGAACGAGACGTGCCGCTCAAACCTATGGAATTCCACGATCGACACTACGTAATAAAGTCTACAAGCTTGCAATCGAACAGAAACGTGAATTATTAGCTAATCATCCACCAATTGCAGTTCTTGAGGACGAAGATGAAAAAGATTCGGAAccagaaaatgagaaagacTCAATGAATAAATTGGGTAATTCAAATGAGCAACTACAAAACTATTTAAAGATGCTTGCGAAAAATTCTGAGCCTATGAAGCAAGAACATAAGGAAACTGCATCACACAATAATCCAATGGGTGGCCCATCATCATGGCCAATAGATCCAGCGGCGTGGATTCAAGGTTTAATGATTGCTAATGGACTTCATGGTCTTCAAGGACTAGCTGGTTTTCCGGGATTACTGCAACAATCATCTTCGTCAACATCGTCGTCATCACCAAAAGAAGAACTTCCAGAATTTCTTAGGAAACTTTTAACACAACCACAAGACATGAAACATGATGATAAGATGGATGGTCGTAGTGGAAGTAATGGCATGCAAAATTCCATAGATCCAATTCTTATGATGAACTTACtacagcaacagcaaaataAACACAAGTCACGATCATCAAATACCCCTGAGATGGATATGAATGACGGTAGTGATGATTCAAGCACTATTCTCAAAATTCCGTCCATTCCAAAAACAATGTTCAATTCTGGCGTTCCATCGTCAGCATCGTCAACGCAAAGTAAGAATGGTGACATAACGCCTTCCACATCACCGCAAATTTCAGGACTTTCAATAAGTCCACAGCTTCATGTTGGTGGATCAACTGGTCAACAAACGCCAACGTTAGCAAATCGTTTAGCTATTCCATCACCATCACTCATGCGCCAAAGAAGTGAATCCGAATCATCGCAACCGACggcaaaattcaatttgcatGATGTCATACGTGAAAGTATTagtaaaaactttcaaacaaATCTCCTTGATGATCATAAACATTCCATGCCACCGTTGACTATTGACACAATGGATGCATATCAGAAGAGACCAACGATATCAGTTATTAGGAATCTTGGTGGAACTGATATATCAAAATTTGGTACAAATCCAAATATTAATCAACTTCAACAGCAACAATTGTCACCAAATACAGGAACGGGTGGTAAAGGTACGCGACCAAAGCGTGGAAAATATCGTAATTATGATCGTGATAGTTTAGTTGAGGCAGTGAAGGCTGTACAAAGGGGTGAGATGTCAGTGCATCGTGCTGGAAGTTATTATGGTGTTCCACATTCCACATTAGAATATAAAGTAAAGGAGCGACATTTGATGAGACCAAGAAAACGAGAACCGAAACCACAGCCACTTGATTCGTCAACTTCCTCATCATCAGCGACGACGTCAGCGATAAAAAGACAGGAAATACAAGCGATTGATAAGAGTAAAGCATTACCGAATGCAAAACCGCCATTAAAGCCACCATATGGAACAAATCCAAATGGCATAAAAATTCCACCATTTATTGATCATGCATCAATGGCAGCGCAATTACAGCTTCAATCACAGCTCTTATGGCCACATCCGAGTGCATTTTCAGGCTTGAGTGCTTTAGATTTTGCACGATCGTCTGCTCAAAATAGCTCGTCGCCGTTTCCACAAAATACTGAGAACTTTTTCGCCCAACaaatgttgcaaaaatttcaagaagaacaacaacaacaacagcaacagcagcagcagcaacaacagtTTAAATCCCCTGTGAATGGTAatcaaaattccaacaatGGTAACAAGCCCAGTGTAAGAGATTTAGAGAGTTTATATAATCCCGTAAGTACAAATGGTTCATTTCTTGATGGCATCATACGTTCGACATTAGATAAAAAGCCCAATGAACTAACACATAGTACATTATTTGAGCATTTGCTTAAGAAAAGTTCAATGCCCAATTCTGGTCCATCCGATGATGACGAGTACTCATCACAACAAGtaacaaacaataaaagaCCTGGTAGTCCGATAAATTATGCGCACCACGATATTAAAAGGGAGCGAACTAGTCCGTCTccaaatgatgataatgatgttGATTCCGATTATGCAATGCATGAGCATCAGCAGcaaacctcaaaactacatgATAATTTGACGATAAAAGAGGAGCTTAATGGCTCAATCAATAACTCCGATGACGTTAATTCATAA
- Protein Sequence
- RAKPRISTIPGRRTYTEEELNNALQDILSGKLGTRRAAQTYGIPRSTLRNKVYKLAIEQKRELLANHPPIAVLEDEDEKDSEPENEKDSMNKLGNSNEQLQNYLKMLAKNSEPMKQEHKETASHNNPMGGPSSWPIDPAAWIQGLMIANGLHGLQGLAGFPGLLQQSSSSTSSSSPKEELPEFLRKLLTQPQDMKHDDKMDGRSGSNGMQNSIDPILMMNLLQQQQNKHKSRSSNTPEMDMNDGSDDSSTILKIPSIPKTMFNSGVPSSASSTQSKNGDITPSTSPQISGLSISPQLHVGGSTGQQTPTLANRLAIPSPSLMRQRSESESSQPTAKFNLHDVIRESISKNFQTNLLDDHKHSMPPLTIDTMDAYQKRPTISVIRNLGGTDISKFGTNPNINQLQQQQLSPNTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDSSTSSSSATTSAIKRQEIQAIDKSKALPNAKPPLKPPYGTNPNGIKIPPFIDHASMAAQLQLQSQLLWPHPSAFSGLSALDFARSSAQNSSSPFPQNTENFFAQQMLQKFQEEQQQQQQQQQQQQQFKSPVNGNQNSNNGNKPSVRDLESLYNPVSTNGSFLDGIIRSTLDKKPNELTHSTLFEHLLKKSSMPNSGPSDDDEYSSQQVTNNKRPGSPINYAHHDIKRERTSPSPNDDNDVDSDYAMHEHQQQTSKLHDNLTIKEELNGSINNSDDVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -