Crip016760.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- kn
- Assembly
- GCA_001014505.1
- Location
- JXPV01002839.1:621-1418[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-92 2.4e-88 297.0 0.1 249 385 8 144 3 147 0.98 2 2 1.1e-06 0.021 13.2 0.3 422 459 149 190 143 191 0.74
Sequence Information
- Coding Sequence
- GGCATTTATCCACCACTTCCAATGGCAACACCATGCATAAAAGCAGTCTCACCATCCGAGGGATGGACAAAGGGCGGCGATTCTGTCATCATTATTGGTGACAACTTCTTTGATGGATTACAAGTCATTTTCGGGACAATGTTGGTGTGGAGTGAGTTGATTACCACACATGCTATTCGTGTTCATACACCGCCAAGGCATATACCGGGTGTGGTTGAAGTCACATTGAGTTATAAGAGTAAACAGTTCTGTAAAGGATCACCTGGTCGATTTGTTTATAtttcaCTTAGTGAACCAACAATCGATTATGGATTCCAGCGACTTCAGAAACTTATACCAAGACATCCAGGCGATCCTGATAAGTTACCAAAAGAGATAATCCTCAAACGAGCAGCAGATATTGCTGAAGCACTTTATTCAATGCCGCGGTCACCATCAGGAGGTGGAGGTTCAGGATTTAATTCGTATACGGGACAGTTGGCAGTTAGCGTTCAACCAGATGGAAGTTCACAGTGGGCTGAAGCCGATGAGTATAGTCGAGCACAAAGTAGCAGTGTAAGTCCGCGGGGCGGNN
- Protein Sequence
- GIYPPLPMATPCIKAVSPSEGWTKGGDSVIIIGDNFFDGLQVIFGTMLVWSELITTHAIRVHTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYISLSEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADIAEALYSMPRSPSGGGGSGFNSYTGQLAVSVQPDGSSQWAEADEYSRAQSSSVSPRGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00319442;
- 90% Identity
- iTF_00319442;
- 80% Identity
- iTF_00319442;