Basic Information

Insect: Chironomus riparius
Gene Symbol: Jarid2_1
Assembly: GCA_001014505.1
Location: JXPV01000745.1:6033-12070[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-21 3e-18 66.1 0.0 7 89 1318 1398 1313 1398 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-21	3e-18	66.1	0.0	7	89	1318	1398	1313	1398	0.92

Sequence Information

Coding Sequence: ATGGTAGTATCAAAACGAAAGAAAGATAATAAAGAGATTGCACCACCAACGCCAGAATTAAAAAGaacaaAAATTCAGGCACAGAGGAAATTTCCACAAGGTCAAGTTCCACCTTCATCTGCATATCTCACGTATAATTTAACAGCAGGAAATGAAACTCCGAAAGAAAAGTCACCAGAAAAGGAACTTCTTCCAAATTTAAGACCAAACACGgaagattttttaactttcttaTGCTTTCGTGGCACAAGTTCATTGCCAAAAGAATTAGATTTTACTAATTCCCTTAGTAATCAACCGTCTACAAGTGGAACGGCATCTGCGACacgaataaataataatgagaaaaagagaCAGGACAAAACTGAGAGTAGTAGCaaaaagaaagtaaataaTACGAGtataacaaataataataataataatagtaacaattccatcaaaattaataagaatgaTGAGGCAACAAAAGTTACAAGTAGtgataaagagaaaaagaatgaTGAACAGAATCCACAAACATCAACATCCGAAAAGAAGGAaactaaaaagtcatttatgcCTTTTGCAGTTCGCAAAAGAGCAGAGATCCATCCTGtgagaaatgataaaaaaaaggcacaaaatagtaataataaaaagaaacaaaatttgcaGAAAGAACACAAATCTGAGACATTAAACGACAATAAGGAAGTTCAAAATGAGCAACAGCGAGTAACAAGATCTAATCCAGTGGAAGAAAAGTCATTACAAAGTTTTGGAAACAAGCGAAGGTCgcaaaataatgaagaaagtAGTGACAGTTATGCACTTAATACAAAGAATATCAAGCTAGATAAATCTCCTAGAATCGAGTTAACTCCAATTGAAAAAGTGCCAATTGAAACATTGAAAAAGgattctaaaattaatgttaatattaagaagaaaattcaaaattctgatCAAGTTAAGAGGCAAACAAGACTGTCTGCATTGCGAAATCCACCAAATTCATCGACGAATGAGAAACGAGAGACgtccaaaaataatgataaactCCTGTACGATagtgaaaagtattttttctcatctgaAGATGACGACGACGACGATCAGCCACTACTCAAATCGGACTCAAATAacgataaaaagaaaaagaaagtgcaagcaaataataaaaatcgttCAAAATTTTCGATTAACAAAAGTAAAACAAATTCTAAGAATACGGCAAATAAGCCAGCAAATGAAGTACAGtctggaataaaaaataataagaagaaagataTAGAACAAAGTATCAACGAGGAAGTTGTTGTAAGTGACAAATCAGTGGAAAATGATTCGAGagttgaaaatgataaaactaTTATTGAAAGTACAAGTATGCCTGAAAAGAAAAAGgttggaaggaaaaaaaagacccaaaaagaaattgaaaaggatAAAGATAATTCACAAGCAAACACTACGGATTTAAGTGAAAATGAGACTCGAAGTCGACCAATGCGCAAAACTAAGGAGGCAGCAACGATTTATATGGAATTAATTGGACGAAAATTGACGCTGCATGATTCATCTGATAATGATTCGTCGTTAGATAGTTTAGAAGTACCAAATCTTAAGCGCGTTGAGCTTTTAGAAAATGAACTAAAAGCAAACGTTGGAAAGGCAAAGGTTTCAGCCGAGGctgagagaaagagaaatgaagacaaaaagggttCAACAAGTGTGAAAAAAACCACaacgaaaattgaaatgaaaaacacaAAAGTTAACGAAAGTGCTactaaaaatgatgatgatgatgagttaCAGAAAAATGTGAGTTTTgacgataaaaaatttgagaaaagttTTAGTGATTCCGATGAGGAACCATTGGCCACAAAAGTAATTAAGAATGCTCCACTAGCAAGTAAAGCAACGCCCAAAAAAAGAGGTAGAAAAAGTAATCAAGAATTGGCTGAAATTGCTCGAAAAGCCGAAGAACAAAGACAAGCTGATAAACTTAAACAGCAGATAAAAGAGCTGTCAGATACGAAAATTGAAACCACTCCTAAACAAAGCTCGTCTGTCAAACTTGAAATCGTTAACCCTCCGATGGTATCGATCCCTCAAGAAACGAAAATGTCAATCCAAAATGAAGTAATTAAAAGTACATTTGACGAAATTAAAGATTCTGTACCAAGACTTGTGAAATCACaagaaattacaaaaactACTAAGAATCATGAAGTAAAGGTTGATATTCAATCTCAAAACGATGACGACTTTGTAAAAGGTTTTGATACTAATTGCACCAAACCAATTTCGGCGATAAAATCGTCAATTAATCTCTTGCCTAGTAAAGAGGAATCGgagaaaatatttggaatCGCTAGTGTTACTTTGGCGCAAAGTAGTGGTCCTTTAGATACAAAATGTACGCTGGGAAAATGTGGATCAATTCATAAGCCATCGTTGGGCCCTGCTGTTTTGACGGAATCAGCTCTTGGAAATAGTTTGTCTCCAAAAGATCGACGGAAAAGTAAAGTTAATATGACACGTGAGCAAATCCAAAAATGGCTAGATGAAGCTTCTTGGACACCAATTCCAGATGATGAAATGgaatcaattgatttaaaaacaacGTCAAAAGCATCAACTTCAAGTGCCATTTTGTCAAAGTCAGGAGATGAATCTCAATCCTCTACTAtaacgaaagaaaaaattgtagatCAATCGCCATCAAACTTTAATGATCAAGTGAAGCAAACAAAATCAGAGTCCATTTCTTTacaaaagctacaaaattcaTTGCGAGCTGAAATTGGTAATAGTAAAACTGTTGCaacaaaaattgaggaaaatatcaagaaaaaaGATATCGAGTCTCAAAATGTATCTTTTGATTCGCAAGCATCaaattcagcaataaaatCTCCAGTCAATGATAAGAAAATTCCGATTTATCAAACTCAACAACAAATACAACAGCAACAGAGGAGGGCACCAGTTTATAAAGCGACCGTAGATAAGCCTGCGACCAAAACAAAGTTAACACCAATAGTTCCGAGTAGTTTTGCTGCATTTTCGCCTGAAAATGAGCACAGCATATATTCATTTGATAGAGAAGATGATGATTTTCCAACTCCCACAACGCCGTTCAGACGAAGTAACTCAAAAactgatgataataataaacgAGATAATGAATCTCAAACAAAAGCCACACCATCAAAAAGTATTCAGCCGTCTCATGTTTCGTTAACTCTAAGTCCTGAAGATAATAAGAAATCAGCATCGATAAGTGTTGGAGTTTCTGATGATCATAAAAAAgataattcatcaaaagtcGATGTTCAGGAAAAGGATGATTCAGACTCTGAAGGTCACACATTTTATATTCCATTGCAAGCGTCAAATACATCATCAGGTAATAAAACTATTCAAGGTGTTGCAGTAAAATTGGGAACGGAAGGAGCTGAAGGACCAAATCAGAGGATTATTATGCATGCAAAATTAGTTACTAAatcgaaaattaattcaactcCAATTCCTGAATCGATGACCAATATGCAAGAATTGGTTAAAACTTTAATGGCAAGTAAGGAAACATCAAAACCAATTCAGACAGTTCAGCcaagatttaaatcaaatgaagCTGTAGAAAGTGTAAGTACTTCTTTACAGCCTGAACCGAGTACATCTTCGTTGGTTGCAAATCAGCGAACTAAGCAAACAACGAAGCTTGGTGTTATGAATGAAGCTCCAATTTTCAGACCtacagaaaaagaatttcaagatCCAATCGAATATATTGAAAGGATAACACCGCTTGCACGGAGATTTGGAATTTGTAGAATAATTCCTCCAGAAACATTTAAACCGGAATGTCGTGTCAGTGACGAGATGAGATTTACAGCATATAATCAATATGTTCATAAGATGCTTCATCGTTGGGGTCCAAGTGCAAAAGAGTTTgcagcaattaaaaaatatttggcgACTCAAAGTATTATATTTCAGCGTCCTCCTTTGATAGCTGGTATTGAAGTCGATTTACCAAGATTATATCATACAGTTCAAGAGCTTGGTGGATTAAAAGAAGTTatagagaaaaagaaatgggCTAAAGTTGCCGAAGATATGTGTATTCCCAAGTCTGCACACGATCGCGTGACAAAGCTTGATGATATTTATTGCAAATATCTTTTACCATACGACACACTTTCACCAAATGAAAGACAAAAGCTATTTGACGAAGTCGAAGCGGATTGGGCAAAGCGTGAAGCTAAAGCACGTAGAAATGCTGATAAAGGTGTGGATTCCGATGAGCAAAATGATTCAGAATCTGATGAGCAAAATGAATCTGATGACGACGAAGAGTGTGATGATAATGAATCAATGGAATGTATGGTAAAAGGTCGAAGCATGGCACTAAGTCAGTTCTATAGAATAGCTAGAAATATGGTTACACTATGGTTCAAAACACCTGAACCAGTTAATTCTGAAATTGAGACAGAGTATTGGCGTCACGTGGCTGTTCGTGACAGTCACGTCTGTGTTCATTATGGTTCGATTGATTCTAGTGCTTATGGTTACGGTTTTCCTGCACACGGACCTAAAACTAAGCTTTCTCCATGCGCAAAGCATCCGtggaatttaaaagttttaacaaaTAACTGTGGATCAATTTTACGATCGTTAGGTCCTGTAATGGGAGTCACAGTTCCAACATTACACGTTGGTATGCTGTTTAGTGCAGTTTGTTGGTACCGTGATCCTCATGGTTTACCATGGATAGAATATTTGCACACTGGAGCAAGCAAAATTTGGTACGCTGTACCTGATGAGCAGAGTTCAAACTTTAGATCAGCTCTTACTTCATTAGTTCCTTCACATTGTCAGAATAAGACAATTTGGTTACCATGTGATACAACGAtgGTTCCACCGTACATGCTAACAGATCGTAATGTTTCATTGTGCAGAACAGAACAACAACCTGGACAATTTGTTGTAGTATTCCCCAGGGCCTACACATCAAGCGTCTGTACTGGATACACTGTCTCTGAAAGCGTTTATTTTGCCACACATAACTGGCTAGACACAGCTCATCTTGATTTCAAGGATGTTCAAGAAAGTTGTGAACCGATGATGTTTTCACTAGAACAACTTTTGTTTGCAATTGCCAATGATCAAAGAAGTAAGGAAGAAacgattaaaaaaatattaccaATGCTCAAAGAGGTCTTTGATATGGAAAAGAAGAATCGTAATTTAttaaagGAATCTGGCGTAAATGcagttgaaaaaattcatgagatCAAGAAACAAATCAATGCTGAGGAATTGGAATGCAATTATTGTCGAGCAAATTTACATATCTCTTGGATCAAAttggatgatgatgaggaagaaaataatgtttattgcTTGAAACATGCTTTGAGATATATAAATGACAATCGTATTCAAGCAAATCAATGCAAATTAATGTACACTTATACGAcggaagaaattgaaaagctgataaaaaagttaaagcttAAAGTTGTCGTCAGCGATGAAAATGTTGGCCATTCGTCATCAACAGCTGTTGATTCTCAGCAAAAGAGTAAAGGAAAACTACACCAAAAGGGAAAGGCAACAAGTAACAAATAG
Protein Sequence: MVVSKRKKDNKEIAPPTPELKRTKIQAQRKFPQGQVPPSSAYLTYNLTAGNETPKEKSPEKELLPNLRPNTEDFLTFLCFRGTSSLPKELDFTNSLSNQPSTSGTASATRINNNEKKRQDKTESSSKKKVNNTSITNNNNNNSNNSIKINKNDEATKVTSSDKEKKNDEQNPQTSTSEKKETKKSFMPFAVRKRAEIHPVRNDKKKAQNSNNKKKQNLQKEHKSETLNDNKEVQNEQQRVTRSNPVEEKSLQSFGNKRRSQNNEESSDSYALNTKNIKLDKSPRIELTPIEKVPIETLKKDSKINVNIKKKIQNSDQVKRQTRLSALRNPPNSSTNEKRETSKNNDKLLYDSEKYFFSSEDDDDDDQPLLKSDSNNDKKKKKVQANNKNRSKFSINKSKTNSKNTANKPANEVQSGIKNNKKKDIEQSINEEVVVSDKSVENDSRVENDKTIIESTSMPEKKKVGRKKKTQKEIEKDKDNSQANTTDLSENETRSRPMRKTKEAATIYMELIGRKLTLHDSSDNDSSLDSLEVPNLKRVELLENELKANVGKAKVSAEAERKRNEDKKGSTSVKKTTTKIEMKNTKVNESATKNDDDDELQKNVSFDDKKFEKSFSDSDEEPLATKVIKNAPLASKATPKKRGRKSNQELAEIARKAEEQRQADKLKQQIKELSDTKIETTPKQSSSVKLEIVNPPMVSIPQETKMSIQNEVIKSTFDEIKDSVPRLVKSQEITKTTKNHEVKVDIQSQNDDDFVKGFDTNCTKPISAIKSSINLLPSKEESEKIFGIASVTLAQSSGPLDTKCTLGKCGSIHKPSLGPAVLTESALGNSLSPKDRRKSKVNMTREQIQKWLDEASWTPIPDDEMESIDLKTTSKASTSSAILSKSGDESQSSTITKEKIVDQSPSNFNDQVKQTKSESISLQKLQNSLRAEIGNSKTVATKIEENIKKKDIESQNVSFDSQASNSAIKSPVNDKKIPIYQTQQQIQQQQRRAPVYKATVDKPATKTKLTPIVPSSFAAFSPENEHSIYSFDREDDDFPTPTTPFRRSNSKTDDNNKRDNESQTKATPSKSIQPSHVSLTLSPEDNKKSASISVGVSDDHKKDNSSKVDVQEKDDSDSEGHTFYIPLQASNTSSGNKTIQGVAVKLGTEGAEGPNQRIIMHAKLVTKSKINSTPIPESMTNMQELVKTLMASKETSKPIQTVQPRFKSNEAVESVSTSLQPEPSTSSLVANQRTKQTTKLGVMNEAPIFRPTEKEFQDPIEYIERITPLARRFGICRIIPPETFKPECRVSDEMRFTAYNQYVHKMLHRWGPSAKEFAAIKKYLATQSIIFQRPPLIAGIEVDLPRLYHTVQELGGLKEVIEKKKWAKVAEDMCIPKSAHDRVTKLDDIYCKYLLPYDTLSPNERQKLFDEVEADWAKREAKARRNADKGVDSDEQNDSESDEQNESDDDEECDDNESMECMVKGRSMALSQFYRIARNMVTLWFKTPEPVNSEIETEYWRHVAVRDSHVCVHYGSIDSSAYGYGFPAHGPKTKLSPCAKHPWNLKVLTNNCGSILRSLGPVMGVTVPTLHVGMLFSAVCWYRDPHGLPWIEYLHTGASKIWYAVPDEQSSNFRSALTSLVPSHCQNKTIWLPCDTTMVPPYMLTDRNVSLCRTEQQPGQFVVVFPRAYTSSVCTGYTVSESVYFATHNWLDTAHLDFKDVQESCEPMMFSLEQLLFAIANDQRSKEETIKKILPMLKEVFDMEKKNRNLLKESGVNAVEKIHEIKKQINAEELECNYCRANLHISWIKLDDDEEENNVYCLKHALRYINDNRIQANQCKLMYTYTTEEIEKLIKKLKLKVVVSDENVGHSSSTAVDSQQKSKGKLHQKGKATSNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00320380;
90% Identity: -
80% Identity: -