Crip003873.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- tfcp2
- Assembly
- GCA_001014505.1
- Location
- JXPV01027424.1:31083-35599[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-68 1.4e-64 217.5 0.1 12 221 104 308 93 310 0.90
Sequence Information
- Coding Sequence
- ATGAACAATCAGTACAGCAACGATTCTTTGCTTAACTTTCCCAGCTTGACAGTGTTTAAGCAAGAGATTCCATCACCACCGAATCAAAATGGCAGTAATGATATGCTCAAAACACCAAGAAGTCCACAACCATGTGTACGAATCACAAATCAGCAATTGAATCCAACTGCAATGATGAATGGCTCGCCAGCTGAACAACATCAAAATCAGCATATTGGTGAGCAACAAACATCGGGAAGCACTAGTAGCAGCAATGGATTAGCCAATTTCTTAGAACAACTTGAAGGAAATAATCAAGGAAGTGGAAATAATCAGTCAAATAATGAAGACGTTAATAGACGTGGAACTAGTCACAATGATGATCGTTTCCAGTATGTTTTGGCTGCTGCGACTTCAATTGCAACAAAGAGTAATGAAGAGACATTGACCTACCTTAATCAAGGTCAAAGCTATGAGatcaaattgaagaaattgggCGATTTATCAACATGTCGTGGAAAAGTTATGAAAAGTGTCATCAAAATTTGCTTCCATGAACGTCGTTTGCAGTATATGGAACGAGAACAGATGCACATTTGGCAATCAAGTCGTCCGGGTGAAAGAATTTTGGATATTGACATTCCACTTTCTTATGGACTATTGCACGTCAATCACTCACCATTATTAAATACAGCTGAAATTTTGTGGGATCCAATGAAAGAAGTCGGCGTTTACATCAAAGTTAATTGTATTTCTACAGAATTCACACCTAAAAAGCATGGCGGTGAAAAAGGAGTTCCATTcagaattcaaattgaaacttaTGTCGATGGACCGTCAGAGACCAAACCTCTACATGCTGCAGCTTGTCAAATTAAAgTATTCAAATTGAAAGGAGCTGACCGAAAACATAAACAAGACAGAGAACGAATTCAAAAACGACCACCAAGTGAACAAGACAAATATCAACGGAGTTACGAGTGTACAATATTGAATGATATTTCAAGTGAAAGCTTAGTAACATCAACAATTGGTTGCTACAGTCCCGAACATATTAAGAGAAATCATTCACCAGTAATGCCAACATCACCAATTCACGTGCCATCAAGCTTGAATCCACTAATGCCGTTTGTTACATCCATTGGGAATGTCTCATCAACAAATGGCTTGTGTAAATTAGATCAAAATGTCGTCTCAACACAAAATTATGACAGCGATGATCTTAATCCAATAACAATCACAAAGGAATCGACACCCAGTCAGCTTACTCAATGGCTGGCTTGTCATCGTTTGACCGCTCATGCAAATGTCTTTGGAAGTTTCTCTGGATGTGATTTATTGAGACTCGCGAAGGAAGATCTGATTCAAATTTGTGGACTGGCTGATGGAATTAGGATGTACAACATTTTACATGCAAAAGCAATAAAGCCGCGCTTAACAATTTTCGTAAGCACCGAAGGCAGCAATACTTACAATGCAGTTTACATGcattcagcaacaacaaaggAACTAGTTCAGAAGCTTTACAAAATTCCTGGATTAGTTAACAATTCAAACTGGAAGTTTGCATCATCGCCAAATCACAGTGGcagcaattcaaatttaaatgatgattccaattttaagatttatgtcAATGGACCAAACAATGTGCTAGTTTTGGTAAACGACGAGGTATTGGCTAATATTAAGGATGAAAGTCTATTTGCTTTAGAAGTCAATAATGGaagcattttaatgaaatcagTTAAGAAATCTGattaa
- Protein Sequence
- MNNQYSNDSLLNFPSLTVFKQEIPSPPNQNGSNDMLKTPRSPQPCVRITNQQLNPTAMMNGSPAEQHQNQHIGEQQTSGSTSSSNGLANFLEQLEGNNQGSGNNQSNNEDVNRRGTSHNDDRFQYVLAAATSIATKSNEETLTYLNQGQSYEIKLKKLGDLSTCRGKVMKSVIKICFHERRLQYMEREQMHIWQSSRPGERILDIDIPLSYGLLHVNHSPLLNTAEILWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQIETYVDGPSETKPLHAAACQIKVFKLKGADRKHKQDRERIQKRPPSEQDKYQRSYECTILNDISSESLVTSTIGCYSPEHIKRNHSPVMPTSPIHVPSSLNPLMPFVTSIGNVSSTNGLCKLDQNVVSTQNYDSDDLNPITITKESTPSQLTQWLACHRLTAHANVFGSFSGCDLLRLAKEDLIQICGLADGIRMYNILHAKAIKPRLTIFVSTEGSNTYNAVYMHSATTKELVQKLYKIPGLVNNSNWKFASSPNHSGSNSNLNDDSNFKIYVNGPNNVLVLVNDEVLANIKDESLFALEVNNGSILMKSVKKSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -