Crip017824.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- Jra
- Assembly
- GCA_001014505.1
- Location
- JXPV01022878.1:1754-2974[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-15 5.5e-12 45.6 6.2 2 65 175 238 174 238 0.94
Sequence Information
- Coding Sequence
- atgaggaattataataataataatccgaATAGTAGTAATAATAAGGATAATAAGCATAACGAGCAGAAATCTAGTGAACCAATAATGAAAAGACCATTAACACTtgatttaaatagaaaaattaattctaatgcGCTCCTCTTGTCAACTCCCGATGTCGAgaaaatgatcataaaaagTCCCGAGCttgagaatttcattttgaatacaGAAACTCTACAGACACCATCATCAATGCAAACTCCGTCAAATTCTCAAGTTGTCTTTCAGCCTTCAAAAATTACAACGGAGCAAGAGGACTACGCGAAAGGATTTGAAGAcgctttaaataaaataaaaactcgcGAGACAGGAAATCAAGTAAAACCCGTAGTTCAAAACGCGCCAAGCATGAGCGGTGGTGGAATTAATTACTCAGAATCAGATAATTCAAATATGCTCCTTCAACAGATTAAAGAGGAGCCCGAGCCTGCAAGTCCTGCACAACAGCATCTTAATCCAATTGACATGGAATCACAAGAGAAGATAAAGCTTGAGCGAAAAAGACAAAGAAATCGCGTAGCAGCATCAAAATGCAGAAAACGAAAACTAGAAAGAATATCCAAATTGGAGGATCGtgttaaaatcttaaaagttgAGAACGGCGAACTCGGTTCAgtgttattaaatttaaaacagcaTGTATTTGACCTCAAGAAACAAGTAATTGATCATCATGATAGTGGATGTCACATTTCGattacaaattga
- Protein Sequence
- MRNYNNNNPNSSNNKDNKHNEQKSSEPIMKRPLTLDLNRKINSNALLLSTPDVEKMIIKSPELENFILNTETLQTPSSMQTPSNSQVVFQPSKITTEQEDYAKGFEDALNKIKTRETGNQVKPVVQNAPSMSGGGINYSESDNSNMLLQQIKEEPEPASPAQQHLNPIDMESQEKIKLERKRQRNRVAASKCRKRKLERISKLEDRVKILKVENGELGSVLLNLKQHVFDLKKQVIDHHDSGCHISITN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320328;
- 90% Identity
- iTF_00320328;
- 80% Identity
- -