Crip008637.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- -
- Assembly
- GCA_001014505.1
- Location
- JXPV01010087.1:30-3221[+]
Transcription Factor Domain
- TF Family
- Nrf1
- Domain
- Nrf1_DNA-bind domain
- PFAM
- PF10491
- TF Group
- Basic Domians group
- Description
- In Drosophila, the erect wing (ewg) protein is required for proper development of the central nervous system and the indirect flight muscles. The fly ewg gene encodes a novel DNA-binding domain that is also found in four genes previously identified in sea urchin, chicken, zebrafish, and human [1]. Nuclear respiratory factor-1 is a transcriptional activator that has been implicated in the nuclear control of respiratory chain expression in vertebrates. The first 26 amino acids of nuclear respiratory factor-1 are required for the binding of dynein light chain. The interaction with dynein light chain is observed for both ewg and Nrf-1, transcription factors that are structurally and functionally similar between humans and Drosophila [2]. The highest level of expression of both ewg and Nrf-1 was found in the central nervous system, somites, first branchial arch, optic vesicle, and otic vesicle. In the mouse Nrf-1 protein, Swiss-Prot:Q8C4C0 there is also an NLS domain at 88-116, and a DNA binding and dimerisation domain at 127-282. Ewg is a site-specific transcriptional activator, and evolutionarily conserved regions of ewg contribute both positively and negatively to transcriptional activity [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-14 8.7e-10 38.7 0.1 102 210 14 116 3 119 0.81 2 2 0.6 5.7e+03 -3.2 0.0 135 161 150 176 145 192 0.75
Sequence Information
- Coding Sequence
- atggcAGATCCGAACAATAATCGCAATAATGGTGGTTCAAATATGCAACAAGATTTAGGATCTAGTACAATTAGTTatcttccaattttatttgcaaatggCTATCCAACCTCACTAGAGAAAATGACACAAGAGCAACTCGAGTTgtttattccatttttaatcaaatgttCACTTAACCTGAAAACTGAAGAGGAACCAAAAATAGCACCAAAATGGTGGCCAAcaaatttagaattttcaatgcCGTTTGAAAAGCCAAAAGATTATAATAAGAATTGGAAGGAGGCGATGAAAAATTTGGTATTAAAGTGCTACGATTATCATAAGCAACCATTTCTACTCAAGTATTCAAAGGATTTAAGCGTTTATGATACAGCAAATTTTCGATATGTTAGAGATAGTGACACAACCACAGCTCTTTGGAGTAGGGATCCTAAAAAGTTACTTTTAACTTTTCGGAATGAATTAATGCAATACGATAGAAAAAGGAGACGGCAACTGTGGAAGAAGGATGAGGCCGTTAACGAGACAGAAGAGGCAGATTCaacatttgatattttccTGTGCGATTTTTGTGATGCAACCTTTGTATCAGAAGAAGCATATACAGAACACGAAAAGAAATGCAATCAGGCGCCAGAGACAGAACaaactattgaaaatattgtgataagtgacgatgaagaagaagatgtaGAGGACGACAAAATTGAGATTGAGATGATGGGTGaacaaaatgactttttaggaTATTTTAGTCTTATCGGTATGAATGCTGATGAATTACCTCGTAGAAACAGTTTATTAGAGCGAAGTTTATCgccaaagaagaaaaagaaggctGTGCCGAGGACACGGGTATGTCAAAAGGATCGAGAAAAAGAgtattcaattcctttttcatCACCCGCCGGTATTGTTCTTACGAAAAAGCCTCTAATCGATGAGGATTATAACTTACAAAGATTGAATAGAAATGAAGACTTTTGTACTGCAAAATCCACAACAAAAGTGACTAGAACGAAGATTAAGTTTCCACAAAATAATACAGAGAAGACATTAATGAGGCAAATGAGAAAAACACGTCCTTATCATTGGCCAAGAAAACAATTAGCATCGTCATCtagagagaaaaatttcgaatttcTTAATCGATGGCTAATAGAAGACTGCAAGCCATTCACAATTCCCACAAAGAAATTAACAAATGAGGACATAAAATCATACAAAGATAGActgataaaaatcaaagagAAAAGGGAGCATTCGAACTGTGTTGATTTGATCTCGGACTCAGATAGTGAGTCAATAGAGTTAGGTGACATAAATGAAACAGATGTGAGTGATGCAATGATGAAACTTAATGGACAATTCTTATCTGTACCAATACcctcaacatcatcatcatcgattAATAATACAACGAGTTACTCCTCAACAAGAATTCCACCTTATAAAGAATTATCAAATCTTAAATATGTAACTACACAATATCTTCCAAATGGGGACATTCAAATTAGTCAACGGACATCGTCGACAAGAATTATTCAGTCTAGTACATTTCATACAAATGATGTAAATAATATACAGAATCCGTGTGACGATCTTGAGTTAATTGATCATCATAATGAGAAACGATCAAGCTCGATACATGAATGGCTTAGTAATGTAAGTGGagagaattttcaaataactACATAA
- Protein Sequence
- MADPNNNRNNGGSNMQQDLGSSTISYLPILFANGYPTSLEKMTQEQLELFIPFLIKCSLNLKTEEEPKIAPKWWPTNLEFSMPFEKPKDYNKNWKEAMKNLVLKCYDYHKQPFLLKYSKDLSVYDTANFRYVRDSDTTTALWSRDPKKLLLTFRNELMQYDRKRRRQLWKKDEAVNETEEADSTFDIFLCDFCDATFVSEEAYTEHEKKCNQAPETEQTIENIVISDDEEEDVEDDKIEIEMMGEQNDFLGYFSLIGMNADELPRRNSLLERSLSPKKKKKAVPRTRVCQKDREKEYSIPFSSPAGIVLTKKPLIDEDYNLQRLNRNEDFCTAKSTTKVTRTKIKFPQNNTEKTLMRQMRKTRPYHWPRKQLASSSREKNFEFLNRWLIEDCKPFTIPTKKLTNEDIKSYKDRLIKIKEKREHSNCVDLISDSDSESIELGDINETDVSDAMMKLNGQFLSVPIPSTSSSSINNTTSYSSTRIPPYKELSNLKYVTTQYLPNGDIQISQRTSSTRIIQSSTFHTNDVNNIQNPCDDLELIDHHNEKRSSSIHEWLSNVSGENFQITT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320319;
- 90% Identity
- iTF_00320319;
- 80% Identity
- -