Basic Information

Insect: Chilo suppressalis
Gene Symbol: stc
Assembly: None
Location: chr10:5737608-5760674[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1 1.5e+04 -4.2 1.6 15 19 409 413 408 413 0.81

2 14 0.031 4.6e+02 0.7 1.7 2 10 441 449 441 449 0.92

3 14 1.7e-05 0.26 11.1 18.1 4 19 457 472 455 472 0.93

4 14 1.1e-08 0.00016 21.4 12.7 1 18 508 525 508 526 0.98

5 14 2.5e-06 0.037 13.8 11.7 1 19 567 585 567 585 0.98

6 14 3.4e-06 0.051 13.3 11.7 1 19 626 648 626 648 0.88

7 14 1 1.5e+04 -5.2 2.2 6 10 678 682 678 682 0.94

8 14 0.0071 1e+02 2.8 7.3 1 11 688 698 688 699 0.93

9 14 0.02 3e+02 1.3 0.3 4 10 703 709 702 710 0.93

10 14 2.8e-06 0.042 13.6 15.0 3 19 717 733 715 733 0.92

11 14 1 1.5e+04 -6.5 16.1 1 18 772 788 772 789 0.81

12 14 0.65 9.6e+03 -3.5 1.3 8 13 794 799 793 800 0.79

13 14 2.1e-08 0.00031 20.4 14.1 1 17 825 843 825 849 0.84

14 14 0.022 3.2e+02 1.2 11.3 1 18 855 877 855 878 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1	1.5e+04	-4.2	1.6	15	19	409	413	408	413	0.81
2	14	0.031	4.6e+02	0.7	1.7	2	10	441	449	441	449	0.92
3	14	1.7e-05	0.26	11.1	18.1	4	19	457	472	455	472	0.93
4	14	1.1e-08	0.00016	21.4	12.7	1	18	508	525	508	526	0.98
5	14	2.5e-06	0.037	13.8	11.7	1	19	567	585	567	585	0.98
6	14	3.4e-06	0.051	13.3	11.7	1	19	626	648	626	648	0.88
7	14	1	1.5e+04	-5.2	2.2	6	10	678	682	678	682	0.94
8	14	0.0071	1e+02	2.8	7.3	1	11	688	698	688	699	0.93
9	14	0.02	3e+02	1.3	0.3	4	10	703	709	702	710	0.93
10	14	2.8e-06	0.042	13.6	15.0	3	19	717	733	715	733	0.92
11	14	1	1.5e+04	-6.5	16.1	1	18	772	788	772	789	0.81
12	14	0.65	9.6e+03	-3.5	1.3	8	13	794	799	793	800	0.79
13	14	2.1e-08	0.00031	20.4	14.1	1	17	825	843	825	849	0.84
14	14	0.022	3.2e+02	1.2	11.3	1	18	855	877	855	878	0.71

Sequence Information

Coding Sequence: ATGTCTCAATGGAACAATTCATACGTATACGACAACCAGTATCAGGGTACTGATGGGTGGAACGGAGACCTGAACAGTCAGTACGTAAACCAAGCCTATTACCCCAACCAACAATATGAACCCACCAGTCAACAATATGTGAGCTTTAATGAGTTCTTAAATCAAATGCAGGGTAATGGAGCTCCATCTACTAGCTCTAACAACTACAATAGTGCACAATACCAAAATTACAGTCAATATGATTACCAAAATATACCAACAAACTCACAGAATGCACAAACAGATGGCTATTATGGAACAAATCCATCCAATTCGAGAAATGGTGCCCAGTCATTCTCTAATAATCAATTTGATAGTAAAATGCAAGATTCCCGCCAATCAAATCTATATACAAATGACCTAATTCTTAAATCAAACTTAACCCCAACTGCCAGTGAATTTGTGCCAAAAGGCTCTGGAAGCAAGCCATCTACTAGCAGACATAATATACCAGAAGCTTCCAATTCTGATAATGCGGCAAGTAATAGTGTATCTGAACAGAGAACACAAAAGAACAGAGGCAATGCATCAGACAGTAATTGGAGAGAAAGACCTCAAACCTCACAACAACAAAATGGGGAGCCGAGTTATAAAAATGAAAATAATAGTCGCTCCCATGATAGTTATAGGAATAGCGATAGTAACAATAGAAAAAGAGACTCTAAAATTCGCTATCAAGAATCTAGTAACTATGAAAATGGTAGTCGAAATAATAGGAATCAATCCAAAACTAAGTCGAAAAACAAAGATGGAGATGCTAGGACTTTTTATAATAGTACAGTAGACAAAAACAGCTATGACTACAGGAATGGCAGGGGAGAAAACTCCAATAGGAACAGAAACTGGGCAGGAAGCCAGAGAGTAAGGGCTACTGAACGAGATACTGTTGAGGATGAGCAGTATGCAAGTAGCTATTTAGTTCATAAAGATGATAAAATAACCAAACAAGATAAAATGTCCAGTCCAAAACAAAGAGGAAAACACCCTGAAAATGTACACACAGAAATGACACAACGAGAGAGATTAAGTGAACAGTTAGATAAAGGGACCCTGGAATGCTTGGTTTGCTGCGAACGTGTTAAGCAGATTGACCCTGTATGGTCTTGTAGCAACTGTTATCATGTATTGCACTTACGTTGCATTAGAAAATGGGCCATGAGCAGTGTTGTTGAGGGCAAATGGCGCTGCCCAGCCTGTCAAAACACTAGTGAAGAGATCCCCATGGAGTACCGCTGCATGTGTGGCAATGTTCGTTCGCCTGAGTATCAGCGTGGGAATGCTGGTGCTCACACTTGCGGCAAGTCGTGTCGGCGCCCGCGCACCTGTCCGCATCCCTGTACGCTGCTGTGCCACCCGGGGCCTTGCCCGCCCTGCCAGGCTACCATTACCAAGCATTGTGGCTGTGGCGCCGAAGCCCGCTCAGTGATGTGCAGCAGCAAGCTGTCGCAAGTGTGCGGTCGCGTCTGCAACCGATTACTGGACTGCGGCGTACACACCTGCCAAAAGAAGTGCCACGACGGAGCATGCGACGATTGTGGCGAAACTGTAACTCAAGTCTGCTACTGCCCAGCGGCACAGAGTCGCTCGGTACCCTGCACGCGCGAGACGGGCGGCGTTACGCAGTGGTCGTGCGGCGAGGCGTGCTCGCGCGTGTTAGCGTGCGGACAGCACGTGTGCCGCGCCGTCTGCCACGCGCCGCCCTGCCCGGCCTGCCGGCTGCTGCCCGCCCTGGTGGCTACCTGCCCCTGCGGCAGGACCCGGTTAGCGGAGGGGTCTCGCAAAGCTTGCACAGATCCTATTCCTCTATGCGGTAACATTTGCGCCAAGCCACTGCCGTGCGGGCCGGCTGGCGATAAACACTTTTGCAAACAGGACTGCCATGATGGCGAATGCCCGGTATGCCCTGATAAAACGCTTCTACAATGTCGCTGCGGTCATTCCAGCCGCGAAGTGCCCTGCTCTGAGCTGTCCCAGAGTTACAACAATATCTTCTGTCAAAAGAAGTGCAATAAGAAACTGTCGTGCGGCCGCCACCGCTGCCGCACCGCGTGCTGCGCGGCCACGTCGCACCGGTGCGCGGTGGTCTGCGGGCGCACTCTCTCCTGCCAGACGCACCGCTGCGAGGAATTCTGCCATACGGGACACTGCGCGCCTTGTCCGCGACTGGGATTCGAAGAGCTCCACTGCGCGTGCGGCGAGCAAGCCCTCCTGCCCCCAGTTGCGTGCGGGGCCCGCCCCCCGCCCTGCTCGGCGCCCTGCCGCGTGCCCCGCCCCTGCGGCCACCCCCCGCACCACTCGTGCCACCAGGCCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGTTGCCACGGCGGACACGAGGAACGAAAAACAATACCGTGCTCCCAAGATGAGTTCTCCTGCGGCCTGCCGTGCGGCAAGCCTCTACCTTGCGGCAAGCACACCTGCATCAAGACTTGTCACAAGGGACCTTGTGATACTGGCAAGTGTACCCAGCCTTGCAACGAGAAGCGCCCCAGCTGCGGACACCCTTGCTCCGCCGCGTGCCACTCGAGTAGCGGCACCCCCTGCCCCTCCAGCGCGCCGTGCCGCCGCCCCGTGCGCGCCACCTGCCCCTGCGGCCGCCGCGCACAGGAGCGCGCCTGCGCCGACAACGCGCGCGACACCGCCAAAATGATGAGCGCACTAGCTGCAACTAAGATACAAGAAAATGGCTCCGTCGATTTATCCGAGGTCCAACGCCCGGCCAACATGTTGAAAACATTGGAATGCGACGACGAGTGTCGCGTCGAACAGCGTACCCGACAGATGGCATTGGCACTACAGATCCGTAACCCTGACGTATCGTCGAAGCTGGCGCCGCGCTACAGCGACGGGCTGCGAGCCACCGCCGTCAAGGAACCGGCGTTCGCGCAGCAGATACACGATAAACTTACGGAGCTCGTGCACTTGGCCAAGAAGTCGAAACAGAAGACCCGTTCGCACTCGTTCCCGTCGATGAACTGGCAGAAGCGACAGTTCATACACGAGCTGTGCGAGCACTTCGGCTGCGAGAGTGTAGCCTACGACGCTGAGCCAAATCGCAACGTTGTCGCCACCGCTGATAAGGAGAAGTCTTGGCTGCCGGCGATGAGCATATTAGAGGTGGTAGCCAGAGAAGCGGGCAAGAGACGCGTCCCGGGGCCGGTGCTGCGGCCACCCACTGCTTCTGCGGCCTCCGCTTCCAACAACGGGCCCGCTCAAACCAAGTCGGGATGGGCAACGCTTACATCATCGAACGCGTGGGCGGCGCGACAATCTGCAACCGCGTCTGCTTCCGCTTCCGCTAACGCTGTAACATCAAGCCCCTCCCGTAACCCCGCGCCGCCCGTAGAAAAGATCGACTACTTCGACAACCCGCCGGACAACTAG
Protein Sequence: MSQWNNSYVYDNQYQGTDGWNGDLNSQYVNQAYYPNQQYEPTSQQYVSFNEFLNQMQGNGAPSTSSNNYNSAQYQNYSQYDYQNIPTNSQNAQTDGYYGTNPSNSRNGAQSFSNNQFDSKMQDSRQSNLYTNDLILKSNLTPTASEFVPKGSGSKPSTSRHNIPEASNSDNAASNSVSEQRTQKNRGNASDSNWRERPQTSQQQNGEPSYKNENNSRSHDSYRNSDSNNRKRDSKIRYQESSNYENGSRNNRNQSKTKSKNKDGDARTFYNSTVDKNSYDYRNGRGENSNRNRNWAGSQRVRATERDTVEDEQYASSYLVHKDDKITKQDKMSSPKQRGKHPENVHTEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCSNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPMEYRCMCGNVRSPEYQRGNAGAHTCGKSCRRPRTCPHPCTLLCHPGPCPPCQATITKHCGCGAEARSVMCSSKLSQVCGRVCNRLLDCGVHTCQKKCHDGACDDCGETVTQVCYCPAAQSRSVPCTRETGGVTQWSCGEACSRVLACGQHVCRAVCHAPPCPACRLLPALVATCPCGRTRLAEGSRKACTDPIPLCGNICAKPLPCGPAGDKHFCKQDCHDGECPVCPDKTLLQCRCGHSSREVPCSELSQSYNNIFCQKKCNKKLSCGRHRCRTACCAATSHRCAVVCGRTLSCQTHRCEEFCHTGHCAPCPRLGFEELHCACGEQALLPPVACGARPPPCSAPCRVPRPCGHPPHHSCHQADCPPCVVLTTKRCHGGHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCNEKRPSCGHPCSAACHSSSGTPCPSSAPCRRPVRATCPCGRRAQERACADNARDTAKMMSALAATKIQENGSVDLSEVQRPANMLKTLECDDECRVEQRTRQMALALQIRNPDVSSKLAPRYSDGLRATAVKEPAFAQQIHDKLTELVHLAKKSKQKTRSHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSILEVVAREAGKRRVPGPVLRPPTASAASASNNGPAQTKSGWATLTSSNAWAARQSATASASASANAVTSSPSRNPAPPVEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -