Csup000053.1
Basic Information
- Insect
- Chilo suppressalis
- Gene Symbol
- ZNF131
- Assembly
- None
- Location
- chr27:1968534-2020650[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.67 39 4.7 0.3 1 23 332 355 332 355 0.94 2 10 5 2.9e+02 2.0 0.7 1 8 387 394 387 398 0.90 3 10 0.02 1.1 9.5 4.1 1 23 458 481 458 481 0.96 4 10 5.8e-06 0.00033 20.7 4.0 1 23 485 507 485 507 0.98 5 10 0.003 0.17 12.1 1.6 2 23 515 535 515 535 0.97 6 10 0.0013 0.078 13.2 0.9 1 21 541 561 541 566 0.94 7 10 0.00054 0.031 14.5 0.5 1 23 574 597 574 597 0.94 8 10 5.7e-05 0.0033 17.5 0.1 1 23 603 626 603 626 0.97 9 10 1.7e-05 0.00097 19.2 0.5 1 23 636 658 636 658 0.94 10 10 2.9e-05 0.0017 18.5 1.5 2 23 665 687 664 687 0.96
Sequence Information
- Coding Sequence
- ATGGAACAAGATGTGCACACCACGTATAGTTCAGTCTGCAGTACTTGCCTCAGCAGAGATAGATATGTGTATACCTTAAATGAGTCCCATTTGGTGTATCAACAGGTTTTTCGTTTACTGATGCACGACTTTGAAGCTGATCGATTTGGTGACCAAGCTCCAAAAATTGAGCAAACAGTGTGTTGGGAATGCCTTGCAATCATGAAGAAATTTAGCCGATTCAAAAATCAAGTGCACAATGCACAAGAGCATTTGTACATCCTTGCCATGAGTAGAACACAAGAGACTATGGATCACACATACATGTCTCAATCCCTATCCACTCTCGAAGCTGTCACCAAACGTGACTACGACAAGATATATCTGTACTACACTCAAGACGAGTGGCCCCAGTCATTTATAGTCAATGCTGGAGATGTTAAGAACGAACAGTATGATGTAGCACAGGCGGTCAGGGATAATATACAGCTGAATATTGACGATCATGTGCTTGAAGTACCAGCGATGGTTTTGGAAAATCCTACTACTGGAGTGATGTCCCGAGTAGTTGTCGATACGGATGCCCTTGTATCAACAGGAGATTCCATGAACAAGCGAGAACTCAACATAGACAGTATGATGGACAACCCCAAGATTGAAGTGATGAGCCATGTGAAGTCATTAAAAGCGCCTACAGAATACGTGGAATGCTTGCCTGGCACCGAAGTATTGAGAGATCGACATTACTGCTTCATTATGGCACCAATGGATGTGTCCAAGGCGGAAGATACAGAAAACAAATCACACTTAAGCACCGACAAAATACTCGGATACACGGGGATGGAACTGACTCCGATGAGAACGATAGAGGCACCTAAACTTGAGGCGACGGATACCAAACCAAATATAACCCCCAAGAAATTACTAGGGTACACCATGGATTATATGACAGAAGAGGAATTGAATGCGATGAGATCAGAATTAAAAAATAAAATACAATATGCTAGCTCAGCGTACAAATGTGAATTGTGTATAATTGGTTTCTACACGCAGCAGCAAGTTGAAGACCACTTCCTGTCCGACCATAGAGCCAAGCCTGGTAAATCCTCTTGCTCAATATGCTGCGTGTACATAGACGACTCTAAACTGATCAGTCACCAGGACTCGCACTACTTCCGGTACACTTGCAAGATGTGCGGCCATAGAGAATACAGCGAGAGAATCATGTCTATGCATGTGAAAAGTCATACGGAGGCACAGGTACATGGTGCGGTTATAAGGATAGGAAGCGGTGCTGGAAAGAGCAAAAAGAAAGCCAAGGAGACCGGCACTAAACCACCACCGAAACCAGGCGATCTCAGGAAGTTGCTATCGAAGACTACCATTGAGGGATACCAGTGCTTGGAGTGCGATATGTTCTTCAAAAATTCGCGAACAAGGAAAACTCATGTAGCAAGATGCCACAGAGAAGGTTTCCAGTGTGACCATTGTAAAAAGAGATTCGTCAATAAAACTACCCTGGCAACACATCTTAGGCTCCACGAAGGCCCCTTACCCCGTGAGGAATGCCCCATCTGCCACAAGATGGTGCGAAAAATCCAACTAAAATACCACATACAACGCCACCAGAACAAAAAACGCTATGAATGCGTCGATTGCAACAAAATCTTCTCACACTTGGCCACGTACCAGGGACATCTCAAGTACAGCAGGGCGCATGCATCCGATCAAATTTTTAAATTTCCTTGCCCGATGTGCAACAAAGGTTACCCCACAAAAGAATCTATGCAGGACCACTTCAACTACCAACATTTAGGGAAAACATCACACAAATGCCCAATCTGTGATAAGCCAATAGCCTCCCGTGCTAACGTGGAAAAGCACATAATGCGCGTACACGGACAAAAGAAGGAGAAACCACGGAAACACGTGTGCCAGATATGTGACAAAGGATTTACGGACAAGAAAGCTCTGAATCAACACGAGGTCATACATTCAGGGGAAAGACCCCTCACTTGTGATATCTGCCAACAGACTTTCAAGCAAAAAGCATCTCTATATACACACAGGAAACGAGTGCACAAAGTGTTTCCGGCGAAGCGATTGGTCCGATACGTGGAGCCTACGACACAAAACTGA
- Protein Sequence
- MEQDVHTTYSSVCSTCLSRDRYVYTLNESHLVYQQVFRLLMHDFEADRFGDQAPKIEQTVCWECLAIMKKFSRFKNQVHNAQEHLYILAMSRTQETMDHTYMSQSLSTLEAVTKRDYDKIYLYYTQDEWPQSFIVNAGDVKNEQYDVAQAVRDNIQLNIDDHVLEVPAMVLENPTTGVMSRVVVDTDALVSTGDSMNKRELNIDSMMDNPKIEVMSHVKSLKAPTEYVECLPGTEVLRDRHYCFIMAPMDVSKAEDTENKSHLSTDKILGYTGMELTPMRTIEAPKLEATDTKPNITPKKLLGYTMDYMTEEELNAMRSELKNKIQYASSAYKCELCIIGFYTQQQVEDHFLSDHRAKPGKSSCSICCVYIDDSKLISHQDSHYFRYTCKMCGHREYSERIMSMHVKSHTEAQVHGAVIRIGSGAGKSKKKAKETGTKPPPKPGDLRKLLSKTTIEGYQCLECDMFFKNSRTRKTHVARCHREGFQCDHCKKRFVNKTTLATHLRLHEGPLPREECPICHKMVRKIQLKYHIQRHQNKKRYECVDCNKIFSHLATYQGHLKYSRAHASDQIFKFPCPMCNKGYPTKESMQDHFNYQHLGKTSHKCPICDKPIASRANVEKHIMRVHGQKKEKPRKHVCQICDKGFTDKKALNQHEVIHSGERPLTCDICQQTFKQKASLYTHRKRVHKVFPAKRLVRYVEPTTQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -