Csup012404.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chilo suppressalis
Gene Symbol
ZNF711
Assembly
None
Location
chr25:9071115-9076885[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.019 1.1 9.6 5.4 1 23 151 174 151 174 0.97
2 16 0.0002 0.011 15.8 1.0 1 23 183 206 183 206 0.97
3 16 0.0031 0.18 12.1 0.5 3 23 220 241 219 241 0.97
4 16 0.0013 0.075 13.3 2.3 1 23 250 273 250 273 0.97
5 16 0.00026 0.015 15.4 1.2 1 23 285 308 285 308 0.97
6 16 0.00024 0.014 15.6 0.4 2 23 336 358 335 358 0.97
7 16 8.3e-05 0.0048 17.0 1.3 2 23 368 390 367 390 0.97
8 16 0.012 0.71 10.2 0.6 2 20 395 413 394 415 0.92
9 16 0.00026 0.015 15.5 0.5 2 21 420 439 419 442 0.95
10 16 0.031 1.8 8.9 4.5 3 23 452 473 450 473 0.95
11 16 0.00039 0.022 14.9 3.7 1 23 478 501 478 501 0.94
12 16 0.00026 0.015 15.5 1.3 2 23 513 535 512 535 0.97
13 16 0.24 14 6.1 2.1 1 23 559 582 559 583 0.94
14 16 0.002 0.12 12.7 4.7 1 23 615 637 615 637 0.96
15 16 0.0012 0.071 13.3 0.6 1 23 703 725 703 725 0.97
16 16 0.14 7.9 6.9 2.0 1 23 731 754 731 754 0.96

Sequence Information

Coding Sequence
ATGTCAATAAAACAAGAAATAGATTTAACAATCAAAGTTGAAGAGTTTGGCCGGAAAGATCCAACTTCGTTTTTACCAGATGAACCAATGTCGTATGAAATTAAAACGAAGAAGAAGAAAAGGAAAAAAAAGAAGCAAGACCAGGACCCTTTCAAAGATGTAGACGAGAAATCTCCAGCAGTAACGGATATAGAAAATTCTGTCCAAGTAACGCTGGATCCTGAAGTATCTATAAAAGTTGAAAATATAGAAGTAGAATTAGATTTTAATGATTTCGCCAACAACAGTGGCCTCATGGTGGAGGGTCCAAACAGTGAAGACAGTCAAGAGCAAGCCGTCAAAATAGAAAATGATAACAAAGAAGCGGTCCTCTTGACGTTCGAGAGCATCATCAGCAAACAAACCGATTTCAGTCTCAAACAAGAAGTTCCCGCTATATCCCAAGAGGCGCACGTCTGCAAATTGTGCCATCTAGTCTTTCAGTCTACAAAAACTTTAGAAATGCACCAGAAAAGGAAGCACCAGTCATTCAGAGAATCATTCCAACATGTCTGCGATTATTGTGGCATGTCTTACGAGATGAAAAACAGTCTAGTAGTTCACATTAAGAGGAAACATGGACCTGGAACCAATCCAGACGACAATGAAGAGAAAGCGTGCGATATTTGCGCTCTAGTCTTTAAGGGAAACACAAGGTTGAGAATGCACATGAGAAGAAAACACGGATCATTCGCGGACTCTTTCAAACACGAGTGCCAGGACTGTGGGTTGACATACGACAAATATAGAAGCTTAATAGTGCACAGAAAACGGAAGCATATGAACAGTAAGAAACCAGTGGTGAATCAATGGTACAATTGTCCCTTCTGTCCCAAAGTGTTTGGTAAGAGGGAGACATATTCGAGACATGTGCAGAGGAAGCACAAATTGTCAGAAGATGGACAGGTTAAAAGCGAAGAACCCTCGAATTTAGTGAGCTACAGGAACGAGGAGACGGGCGAAATCACGTGTACAGAATGCCCTCTGGTGTTTGCTTCCATGAATTTCCTGAAACTCCACATGAGGCGAAAGCACAATGCTCTAAAAGAAGACTTCAGATTGAAGTGTAAAATCTGTAATTTGTCATACGATAAGATAGAGAGCCTCAAAAGGCATATAAGGAGAAAGCATGATAACGATTCCTACTGCGAAGTGTGCAATAAACAATTCGAATCGAAAGAGATGTATTTAAACCATACCCACGTAAAAGTAATTAAAGAGTGCACCGTTTGTGGTTTGATCTTCGCATCGCAAGGTGGCCTAGCAAAGCACATGAGGTGTACGCACAAAGTCGACTCGCCCAAAGTCACTTTTTGCCATTTATGCAACAAAGGTTTCCACGACAAACGGCAGTTGAAACCTCATTTGATGAAAGTGCACTATAAAGTTTCGTACACCTGTAAATATTGTCTGAAAACATTTAAAGCTAAGGAGAGTTACAGGAGGCACATTCTGTTCAAACATCCCATGGAAAATCATTTCGTCGACCAAATGCAGCAGTGCGATCAATGCTCCGAGAAATTCTCCGATGAGTTGGAGTTGTGTAAGCATATAAATACAGCGCACTCAGAGATATTGCCTGACGCTAAGCTGCCGTTTGTGACGGTCAAAAAGGAGGAAGAAGCGAAAGACATTTATCAGTGCACCAAATGCACAGACATTTACTCCTCTTTTGAGCAAATGAAGGCTCACTACGAACAAGTCCACCACTTTGGCCAAGAGACTCAGTGCCAGATATGCGGTGAAATCATGCCCGGGAACCAAGTACAGAAGCATATCAAAACCGTGCACACTGTTACAGTGCACGATTGTAAATATTGCGAATTTAAAACTTCCAACAAATCAAGTATGACCCAACATATGTTGAGACATAAGAACGCTACCACCTTACACTGCGACTTCCCGGGGTGTAAATACAAGAGTTACTACGATATTCCAATGCAGAAACACAAGCAAAAGCACCAGGAATTGGGTTTGAAATTGCAATGTTCCAAATGTCCTTTCCAAACGATGAGTAAGTACATATTGAGGTACCATGAGGAAGCACATGCGACGGGCAAGAAAAGATACAAATGTGACCAATGCGATTACTCTACAATCTTGCCAGCAAACTTAATGCAACACAAGTATAAACATTCTTCAGAGAAAAAGTTCAAATGTGAAGTTTGCCCGTTCGCTACTAAGTACAACACTTCTTTAAGGTTTCACGTTAAAAAAAAGCACTGTGATCTACCAAGTTTAAAATAG
Protein Sequence
MSIKQEIDLTIKVEEFGRKDPTSFLPDEPMSYEIKTKKKKRKKKKQDQDPFKDVDEKSPAVTDIENSVQVTLDPEVSIKVENIEVELDFNDFANNSGLMVEGPNSEDSQEQAVKIENDNKEAVLLTFESIISKQTDFSLKQEVPAISQEAHVCKLCHLVFQSTKTLEMHQKRKHQSFRESFQHVCDYCGMSYEMKNSLVVHIKRKHGPGTNPDDNEEKACDICALVFKGNTRLRMHMRRKHGSFADSFKHECQDCGLTYDKYRSLIVHRKRKHMNSKKPVVNQWYNCPFCPKVFGKRETYSRHVQRKHKLSEDGQVKSEEPSNLVSYRNEETGEITCTECPLVFASMNFLKLHMRRKHNALKEDFRLKCKICNLSYDKIESLKRHIRRKHDNDSYCEVCNKQFESKEMYLNHTHVKVIKECTVCGLIFASQGGLAKHMRCTHKVDSPKVTFCHLCNKGFHDKRQLKPHLMKVHYKVSYTCKYCLKTFKAKESYRRHILFKHPMENHFVDQMQQCDQCSEKFSDELELCKHINTAHSEILPDAKLPFVTVKKEEEAKDIYQCTKCTDIYSSFEQMKAHYEQVHHFGQETQCQICGEIMPGNQVQKHIKTVHTVTVHDCKYCEFKTSNKSSMTQHMLRHKNATTLHCDFPGCKYKSYYDIPMQKHKQKHQELGLKLQCSKCPFQTMSKYILRYHEEAHATGKKRYKCDQCDYSTILPANLMQHKYKHSSEKKFKCEVCPFATKYNTSLRFHVKKKHCDLPSLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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