Basic Information

Gene Symbol
Ncor2
Assembly
None
Location
chr20:6112375-6190122[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-07 0.0002 21.1 0.0 1 43 511 553 511 555 0.97
2 2 5.8e-05 0.066 13.1 0.0 5 46 890 930 890 930 0.94

Sequence Information

Coding Sequence
ATGCCAACCCATGCTGTAAATGGAAACTTAGGCCTGTCAACATGCTTTGGTATCATCATCATCATTATCATCGACCCATGCTCGTCCACTGCTGGACAAAGGTTTCTCCTAATGCACTTCACTGCTTCCGATTTTCTGCCACTCTCATCCAGCTCATTCCAGGCAGCCTACGAATGTCATCATCCCATCTTGTCTCAGGGCGTCCCACACTACGTTTACAGAGTCGCGGTCTCCACTCAAGAACTTTACGGCTCCATCGGTATGCTTTTCACTATTCTAGTCATAGTTAATAAGCCCGGGCAGACGGATCACGGGCACGGCGGCGGCGCGCTGGCATACGGCGGCAAGCCGGCCGGCGCGGTGGTGGCGCCGCCGCAGCCGCGCGCGCCTCCCGCGGCGTACGCGCAGCCCTACTCGCCCGCTCTGCGGCTGCACCAGCCCGGCTATGGCTCCGCCGCACTTACATTCAGGGATGGCAGCGGCTACGTCCGTAGCGGTGGCGGCGGCGGCGGCGGGGGCGGCGAGTACCGCGGCGGGCGGGTGTCGCTGCTGGGCGGTGCCTACCTGCCAGCGCCGCAGCCGCAGCCGCAGCACCCGCCCGCCGCGGAACCGCCGCCCTTCAAGAAGATCCGCTTCGGTGTCGACCGACCGCCCCCCACTCCTATGTCCTTGCATCAGCCGCTCAGAGTCGATACTAGGGAGTCGGTGAACTCGTATAATACCGTGGAGCTCTCACCCAACCCGCCTTCGGAGCCCACGGTGGAAGACCAGAGCTTTCGCACCACCAAGGATGACCTGCTGCAACAGATATCCAAGGTGGACCGCGAGATGGCGTTGTCTGAGGCTACACTATCGAAGCTCAAGAAAAAGCAGGAGGAGCTGGAGCAGACGGCTTCCAAGCCAGCCCGAGCCGAAGAACCTGAGGAAGCGGTGCCGAGGCATAGGAGTCTGGCACAGTGTGTCTACGCGGACAATAGAAAGAAGGCGATGTGCGCTCACGCCGCCGTTTCCCATTTGGGCCCGGCGGTGCAATGGCCTCTCTACAATCAACCTCAAGACGCGGCCCCCTACCACGACAATATTCGTAAACATCGCGCCTTCCGCCGTCGCCTCGCCGCGCACATACATCGCCTGAAGAGGGAAGCGGCTAAGCGAGAAGAGATGTTAGCAGAAGCGTACAGCTCACGTGCAGCAGAGTGGTTAAGAAGGGTAGAGAGGATAGAACAAGGGCAGAAGAGGAAAGCAAAGGACGCCAGAAATCGAGAGTTCTTCGAGAAGGTATTCCCCGAGTTAAGAAAGCAGCGGGAAGAACGTGAGCGTTTCAATCGCCTCGGGGCCCGAGTTAAATCCGAAGCTGAGCTAGAAGAAATAGCTGACGGTCTCCACGAACAAGAACACGAGGACAAGAAAATGAGGTCGTTGACCGTCGTGCCGCCGCTACTGAGGGACCCAAGGGACCCCACGCCCAAATACATTGACACTAACAGACGGTGTATGGATATGGAGGCGGAACACAAAGGACTGCAGAACAGGAACGTTTGGTCAGCGGCCGAAAGAGAAGTGTTCCGGGAGAAATACTTACAGCATCCCAAGAACTTCGGTCAGATCGCCTCCTTCTTACCCAGGAAAAGTGTCAGAGATTGTGTCAGGTTCTACTACCTGTCAAAGAAGGCGGAGAACTACAAGCAGTTACTCCGTAAACCTCGGCAGCGCCGCTCGGCTCGGAACCCGGCGCGGGCGGCCCCGGAGCCCGACCTGCCCGCCGGCGTCACCACGCGCCTGCAGCGCTCGCAAGGCGCAACACAACGCACGACTGACAAGGAGCCGAGCATAGAAGAAGGGCTGGGGTGTATACTACCCCCAGCCGCCCCTGCGCCCGCGCATCCAGCACGGACGGAGCTGATCCGTACGCCGCCTTTGATCCCGTCGCCGCCGCCGGCGTCATCGGCGCCCGGCGGCGGGGCCAGCAGCGACCCGGTGCCGACCACGCCGCCGCCGCTCGAGCTCACGCCGGACACGCCGCTACCGCCGCTGCCACCCATGCCGCCCCCCAGTGGGGACGCCGGGCCTGGAGGCACTGCATCTCCGTCGAGCGTGGCATCTCCCCTCCCCCCGGGCGGCAGTACGACGATGGTGCCGTCAGCGGTGGCATCCATACCCACGCCGCCCACGCCCACGCAGCCGCCCACGCCAACACAGCCGCCCACGCCGGAGACAGCGATGACGGAGCGCGTGAGCACGCCTTCGAGCGTGAGCAGTACCCCAGCCGTAACAACCACACCTACTCCACCCGTAACCACAGTCGCTGCATCCACTTGTTGCGCTGTATGTGGTGGACCAAATGCTACCAGGGCAGTCTCCAGAGCGAGAGCTACCCACTATGGTTTACAAGAAGAATCGGCAGGTGCTAGGGTGTGCGAGCCTTGTCATTGCCGATGTGTCCGGTCCCGGTATACTCGGTGTCCGGTACCTACTTGTCCTGGGCCTCGAGTCAGGGCGAAACGGTTAAGACACCTCCCGCCAAGATGGCACGATCTCAGTTTAGAATTGAAGAGGCCGCTTATGGACGAATTCCAGATTCCGAGTGAGTTGAGCAAATGCTGCCTAGCCTGCCTGAAGCGTATAACGCGTCGGTTAGAGACGGTGGGCGAGGGAACCACGGAACCGTCTGAGGAGGAGGTGTCCCGGTTCAGATCCTTACTGAGGGAGCATGGTACCGCGTGGGATCGAGCCGCGGCCGCCTGTGGCAGGTCGCCCGCTGCTTTGAAGGCGTTTTATTTTACATACAGGAAAAAGCACCAGCTCGAGTCCTGCATCACGAGTAGTAGTTTAGAGCGTTCGACGCCCATTCGTTCTTCCTCCGAAGAGAGCGGTAGTTCAGGGGCGGGCGATTCGTCTAGCGGGGAGCAGGGCCCCGCGCCGCCCCCGCCCGGGCCCCGGACAGACGCGGCCGCGCCGAGAAGAGCTAGACGCGACGAATACGACTCGTCGGCGACGGAGACGGCGGATGAGGAGAGCGAGCCCAGTGCTAAGATACTACCGCCCACATCGCTACCTCCAGTGAGCGTAGTATCGTCAGCACCGGCCCCTACACTCATATGTAGCTCCAGTACAGTCAGCAGCGTAGTTACCACGCCCACAGTTTCCGGCGTGGCCACAGTTACCGGCGTAACCGGCGTGACTGGCGTCGGAAATAGTACGGCGGCGTTAGTGTCAAGAAACGGCCCCGCCGGCACGCCGCTTACTGTCAGAGACGTGGTTTTAAACATGATTGAGATCAGTTTGACGAAGAATAATCAAGCCACACCGCCGCAGCCTAAGCCACATCAATTAAAAGTTACATCAACGTCAGGCAACAGGGAATCGCTAGCAACACTGAGCGTTGTAAACAGCACGCATAGCGCGCGAAGTTCGCCGCGGTCCCCTCAACGCCCAGCCACGATCACGCCGTTGCAGCCGTTGCAACCGTTGCAAGATGGCGTCGTCGTGCTACACATCGAGCCCCGTCCGGAACCGTTGCTTGATCTCAGCGTGAAGCGGCCGAGACATGAGTTGGCGTTCCCTCCGCCTAATAAACCGCCGTATCGAAACAACGACTACCCCCCAACACCGTACCGAACAGCCGAGAGAGAATCGCCAACCCAATACAACTCTAAACCTAAACAGACGCAACAAACGGCCGCACCTAGGCCTCAACTCAAACCGGCGGCCAACCCAAAGGGGTCCATAACGTTAGGCACCCCGGTCGAGGGTAGATTTGAGCCCAGAAGGACCCCGGAGCCTAAAGGGGGCTCCATAACGGCTGGAACTCCGGTACATCATGATAAGAGGGCGTTTGACTTCTATAAGAGGCGGAGTCCTAGCGGACCATATTACACTGGAGCCCCGCCCCAACAGAGACCGCATTCGCCTAACTATTCACCTCAGCAACAAAGCACCGGCTCCGGCTACTCTCGCAGCCCGTACGGTATAGAACAACGTCAGATCATAATGGCGGACTTCATCACCTCGCAGCAGATGCACGGCGGCGCCAGAAGGGGGGTGGAAAGGGAGAACTCCCCTCCACCAGGGGCGGCTTACAGGCGGGAGCCTGTTATACAGAGATACCCGCATCAACCGCCCCCACCACCTCCCCCACCGGGTCACGAGGCGTTCACGTCGCTGGTAGACGTGGCATCAGCGGCGTCCGCTCTGCCGGTGCCGCGAGCGCCCGAACAGAAACCCGAACCCAAGACCTCGCACGTGCAGCACCAGCAGCACTCTGCGCACGGCCCGCAACCACACGACATCAGATTGCAAGACAGACTGCAACGAGACATGGCGATAGCACAGAAGTACCATCAACAACATTTACAATATCAAGTTTTAGAAAGAGACAGGAGAGCGCAGCAAGCGCAATATTTGGAGAGGGACAGACAAATAGCGTTGCAACAGAATAGAGATCGTGAGCGAGCGATGCAAGCGTTACAAGAGCGGCACGCGGCCGGAGAGCATTCCCATCACGCGCAGATGCACGAGCGACACCATCTGCAGCATCCGCAGGTGGTATCGAGTCAGGAAAGCGAGCGACGGATGGCGTACACGCAACACAAACAACAGCATCGTGCTCAAACGCATCTAATCGACAGGAAAGATGGCCGTCCCCCAGTAGCAGTCAGCGTGGCTAGCAGCGGCCCCTTGCCTAGCGTAGCAGTGGGGGCTCCAGTGGGGGCGGGGGCTCCGGCGGGCGCGGGGGCTCCAGCAGTAGCGGGGGCCGGGGTGGGGGCGGGGGCGGAGGGCAGGAGGCCCGGGGAGGGGACTCTCACCGCGGCCTCGCTCATTGATGCGATAATAACGCATCAAATAAGCCAGGCTACGGACACGCAGAGATACCCGACCCTACGCGAGTGCGATAACGGCGCCCCCAACCAATCGCAAGGCGATCGGGATCGTTCCACGTGCGAACGACCCGAACGACCGGAACGACCCGAAAGACCGGAACGACCCGATCGACCTGAAAGACAAGAAGACCCGCAGCACACAACTAGCATAAAGCTGGGAGATCTCGCCTCAAATATTATTACCAGGGACTTTTGCAGTCCCACTGCTGCGCTTGTACATCATAATAACCGTTTCGCCGTATCCACGTCGGAGGGGTACAGCACGGGCGGGGCCACTGTACAGGCAGGCCCACAGGCGGGGGCGGGCTCACAGGCTGTAGCGGGCTCACAGGCGGTAGCGGACGAATGGAAGAGACGGGAGGCGCCCAAGCATGCCCCTTATTTAGTGGAGCCGGTGTCGCCGCTTGACAACCATCACGCTAATAGAAGCAACAGCAGTCGTCGTTACAGCGGCGCGGGCGGCGTTCTAACCGCCTTCGACTACGTCACCAACCGCATCGTTGAAGTGATGCGATCCGACGCTGACGAACGAGCGAAACCGCCGGCTTTCCCTACTGCATATGCTTACCCTTATTCAGCACTCAATGTTCCCGCTGACGGTGAGATACACCAACTAATAGTTGTAACTAGCAAACCAGTGAACCAAATGTTCACCAAAACCTGA
Protein Sequence
MPTHAVNGNLGLSTCFGIIIIIIIDPCSSTAGQRFLLMHFTASDFLPLSSSSFQAAYECHHPILSQGVPHYVYRVAVSTQELYGSIGMLFTILVIVNKPGQTDHGHGGGALAYGGKPAGAVVAPPQPRAPPAAYAQPYSPALRLHQPGYGSAALTFRDGSGYVRSGGGGGGGGGEYRGGRVSLLGGAYLPAPQPQPQHPPAAEPPPFKKIRFGVDRPPPTPMSLHQPLRVDTRESVNSYNTVELSPNPPSEPTVEDQSFRTTKDDLLQQISKVDREMALSEATLSKLKKKQEELEQTASKPARAEEPEEAVPRHRSLAQCVYADNRKKAMCAHAAVSHLGPAVQWPLYNQPQDAAPYHDNIRKHRAFRRRLAAHIHRLKREAAKREEMLAEAYSSRAAEWLRRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPRDPTPKYIDTNRRCMDMEAEHKGLQNRNVWSAAEREVFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSARNPARAAPEPDLPAGVTTRLQRSQGATQRTTDKEPSIEEGLGCILPPAAPAPAHPARTELIRTPPLIPSPPPASSAPGGGASSDPVPTTPPPLELTPDTPLPPLPPMPPPSGDAGPGGTASPSSVASPLPPGGSTTMVPSAVASIPTPPTPTQPPTPTQPPTPETAMTERVSTPSSVSSTPAVTTTPTPPVTTVAASTCCAVCGGPNATRAVSRARATHYGLQEESAGARVCEPCHCRCVRSRYTRCPVPTCPGPRVRAKRLRHLPPRWHDLSLELKRPLMDEFQIPSELSKCCLACLKRITRRLETVGEGTTEPSEEEVSRFRSLLREHGTAWDRAAAACGRSPAALKAFYFTYRKKHQLESCITSSSLERSTPIRSSSEESGSSGAGDSSSGEQGPAPPPPGPRTDAAAPRRARRDEYDSSATETADEESEPSAKILPPTSLPPVSVVSSAPAPTLICSSSTVSSVVTTPTVSGVATVTGVTGVTGVGNSTAALVSRNGPAGTPLTVRDVVLNMIEISLTKNNQATPPQPKPHQLKVTSTSGNRESLATLSVVNSTHSARSSPRSPQRPATITPLQPLQPLQDGVVVLHIEPRPEPLLDLSVKRPRHELAFPPPNKPPYRNNDYPPTPYRTAERESPTQYNSKPKQTQQTAAPRPQLKPAANPKGSITLGTPVEGRFEPRRTPEPKGGSITAGTPVHHDKRAFDFYKRRSPSGPYYTGAPPQQRPHSPNYSPQQQSTGSGYSRSPYGIEQRQIIMADFITSQQMHGGARRGVERENSPPPGAAYRREPVIQRYPHQPPPPPPPPGHEAFTSLVDVASAASALPVPRAPEQKPEPKTSHVQHQQHSAHGPQPHDIRLQDRLQRDMAIAQKYHQQHLQYQVLERDRRAQQAQYLERDRQIALQQNRDRERAMQALQERHAAGEHSHHAQMHERHHLQHPQVVSSQESERRMAYTQHKQQHRAQTHLIDRKDGRPPVAVSVASSGPLPSVAVGAPVGAGAPAGAGAPAVAGAGVGAGAEGRRPGEGTLTAASLIDAIITHQISQATDTQRYPTLRECDNGAPNQSQGDRDRSTCERPERPERPERPERPDRPERQEDPQHTTSIKLGDLASNIITRDFCSPTAALVHHNNRFAVSTSEGYSTGGATVQAGPQAGAGSQAVAGSQAVADEWKRREAPKHAPYLVEPVSPLDNHHANRSNSSRRYSGAGGVLTAFDYVTNRIVEVMRSDADERAKPPAFPTAYAYPYSALNVPADGEIHQLIVVTSKPVNQMFTKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-