Basic Information

Insect: Chesias legatella
Gene Symbol: -
Assembly: GCA_947359385.1
Location: OX375780.1:190545-199802[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.031 1.7 9.3 0.8 1 23 285 307 285 307 0.97

2 7 0.62 35 5.2 2.1 1 23 314 336 314 336 0.86

3 7 7.9e-05 0.0045 17.4 0.4 2 23 343 364 342 364 0.96

4 7 2.7e-05 0.0015 18.9 3.5 1 23 370 392 370 392 0.98

5 7 0.00017 0.0098 16.4 2.9 1 23 398 420 398 420 0.97

6 7 5.8e-06 0.00033 21.0 0.5 1 23 426 448 426 448 0.97

7 7 3.4e-05 0.0019 18.6 3.6 1 23 489 512 489 512 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.031	1.7	9.3	0.8	1	23	285	307	285	307	0.97
2	7	0.62	35	5.2	2.1	1	23	314	336	314	336	0.86
3	7	7.9e-05	0.0045	17.4	0.4	2	23	343	364	342	364	0.96
4	7	2.7e-05	0.0015	18.9	3.5	1	23	370	392	370	392	0.98
5	7	0.00017	0.0098	16.4	2.9	1	23	398	420	398	420	0.97
6	7	5.8e-06	0.00033	21.0	0.5	1	23	426	448	426	448	0.97
7	7	3.4e-05	0.0019	18.6	3.6	1	23	489	512	489	512	0.97

Sequence Information

Coding Sequence: ATGGCCCAAACGAGTGCAATGAACTCACCGGAACAGAACGACGGCAAAAATGAGAACATCAAGAAGGAGATAGAAGTGACGGTGAAGTTGGAGTCGGTGGAGTGCTTGGTGTGCGCGGCGCGCTCCCCCGACTGGTGCGACATCTACAGGTCCCGCACGCTCGCCACCGGCACCACGGTGCACGGCTTCCTCGCCAGGTTCACGCAAGCGGACCTCTCGCAGTCCGCTCCCTCAGTCTGCTCCAACTCCGTCTGTAAGACCTGCTTCGATCTCATCAACGTACTCGAGCAAGCCGAGATTGAGTATTTCAAAATAAAGGAAACTTTCGACACTTTGCTCAGTAAGAATCCACTGTTTGAGCTATCGTTTCCTCAACCGATCGGACTCTCCTCCGTCAAAAACGAAGTCACCAAAATCAAAGAGAGGACCGAGCCCGATTCCGAGGATGAGCCCCTCGCGCGAACCCGACAGAAACATGGTGGCAAAGGAGTCAAAAAGAAAAAGAAAACTAACTCTCTCGGAAAGGCAAAACGAAAGAACTCTAGCTTAAAAGTTGATAATTGGCAATGTGACGAATGTCATTCTCACGGTGAGACGGGTGGAGCCGTAGGGCTGGCCGCCCACAAGCTGACCATGCATGCCATCACTGAAGCTACGGTTATCAAAACTGAAGATACCGCTGACATTGATGCTGAAAGGTCTCAAAGTCCATACAACAATGGTATGGATAATGTTACAGTTGATTTTGGTGATTTTGATGATGATGATGACAGCACATTCAATCCAGATGACTTCCTCTGCCCGGAGCCAATGAAAAAATTGAAAAAAAGAAACAAACCTGTTAAAGTGTGGCATCCGTGCGACCAGTGCGAAGCTCGATACTCTTCTATAGCCCGTCTGGAACAACACAGACAGAAGCACGACGGCACCAAGCCACCTTACATCTGCGAGGTGTGCGGCGCGCACTACAAGCACAAGCGAGCCTGCGACATACACATCGCGTTACACAAAGGCATCAGCGACTGGAAGTGTGAGGAGTGCAACAAATTGTTCCCGTCTAAGAATGCTCTACAGCGGCATAACAACATCCACACCGGCAAGCTCAACTATCAGTGCGACCTGTGCGGCAAGTCGTTCATCCACACGTCGTCGTTCAAGATGCACAAGCTGTCCCACTCGGGCGTGAAGCCGCACTCGTGCGACGTGTGCGGGCTGGCGCTCATGACGCGCTCACATCTCAAGCGGCACAAGCGAATCCACAGCGGAGAGAAGCGGCACGAGTGCGCTGTCTGCGGCAAGCGCTTCTCCGAGAGGTACAACCTGGCGGCGCACGCGAAGTCCCACGAAGTGCCGGCGCTGGGGGTGGCGTGCGGCGCCCCCGCCTCCTCCGCCCCCGCCGCGGCCGCCCCCGCGTCCGCCCCCGCCCCCGCCCCCGCCGCCGAGCCGGCGCCGCGCCGCCGCCTCTTCCGCTGCCACTTCTGCACGGAACGCTTCGAGAGGAGGTACATGCTGGAGCGGCACATGTCGGTGCTGCACGGGCGCACGCTGGAGCGGCCGCCGCCCACGCCGCGCAACACAATGAGCAAGCTGCTCAAGGCGCAGGCGCAGGCGCGGCAGCACTGCACCAACACACCGGACGCAGAGTCAAAAGACGAGCGCAGTTCGGAGTCCCGCGCACCGCTCGCGCCCTCCAAGCTGCTCGCCCAACTCACGTCGTCGTCGCTGGCGCCGGCCGCGTGGTCGGGCGCGTACGCGGCGGAGTTCGGGCTGCGCGCGGACTTCCCGCACTGA
Protein Sequence: MAQTSAMNSPEQNDGKNENIKKEIEVTVKLESVECLVCAARSPDWCDIYRSRTLATGTTVHGFLARFTQADLSQSAPSVCSNSVCKTCFDLINVLEQAEIEYFKIKETFDTLLSKNPLFELSFPQPIGLSSVKNEVTKIKERTEPDSEDEPLARTRQKHGGKGVKKKKKTNSLGKAKRKNSSLKVDNWQCDECHSHGETGGAVGLAAHKLTMHAITEATVIKTEDTADIDAERSQSPYNNGMDNVTVDFGDFDDDDDSTFNPDDFLCPEPMKKLKKRNKPVKVWHPCDQCEARYSSIARLEQHRQKHDGTKPPYICEVCGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRIHSGEKRHECAVCGKRFSERYNLAAHAKSHEVPALGVACGAPASSAPAAAAPASAPAPAPAAEPAPRRRLFRCHFCTERFERRYMLERHMSVLHGRTLERPPPTPRNTMSKLLKAQAQARQHCTNTPDAESKDERSSESRAPLAPSKLLAQLTSSSLAPAAWSGAYAAEFGLRADFPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -