Basic Information

Insect: Chesias legatella
Gene Symbol: -
Assembly: GCA_947359385.1
Location: OX375772.1:1321806-1328675[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0029 0.16 12.5 0.8 1 23 296 318 296 318 0.96

2 12 0.00031 0.017 15.6 0.4 2 23 326 347 325 347 0.94

3 12 0.023 1.3 9.7 0.8 1 23 351 373 351 373 0.97

4 12 0.00039 0.022 15.2 0.5 1 23 378 401 378 401 0.98

5 12 0.00051 0.029 14.9 0.3 1 23 405 428 405 428 0.94

6 12 0.0058 0.33 11.5 0.2 2 21 446 465 446 470 0.92

7 12 8.3e-05 0.0047 17.4 0.9 3 23 480 501 480 501 0.98

8 12 0.39 22 5.8 0.3 3 23 522 543 521 543 0.96

9 12 5.2e-06 0.00029 21.1 0.5 1 23 554 576 554 576 0.99

10 12 2.8e-06 0.00016 22.0 4.8 1 23 582 604 582 604 0.99

11 12 0.0022 0.12 12.9 2.0 1 23 610 632 610 632 0.98

12 12 9.8e-05 0.0056 17.1 0.4 1 23 638 661 638 661 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0029	0.16	12.5	0.8	1	23	296	318	296	318	0.96
2	12	0.00031	0.017	15.6	0.4	2	23	326	347	325	347	0.94
3	12	0.023	1.3	9.7	0.8	1	23	351	373	351	373	0.97
4	12	0.00039	0.022	15.2	0.5	1	23	378	401	378	401	0.98
5	12	0.00051	0.029	14.9	0.3	1	23	405	428	405	428	0.94
6	12	0.0058	0.33	11.5	0.2	2	21	446	465	446	470	0.92
7	12	8.3e-05	0.0047	17.4	0.9	3	23	480	501	480	501	0.98
8	12	0.39	22	5.8	0.3	3	23	522	543	521	543	0.96
9	12	5.2e-06	0.00029	21.1	0.5	1	23	554	576	554	576	0.99
10	12	2.8e-06	0.00016	22.0	4.8	1	23	582	604	582	604	0.99
11	12	0.0022	0.12	12.9	2.0	1	23	610	632	610	632	0.98
12	12	9.8e-05	0.0056	17.1	0.4	1	23	638	661	638	661	0.98

Sequence Information

Coding Sequence: ATGAATAATATGTTCATGTGTGAGGAGAGCGAGCATGTGCGAGTGTGTCGCGTGTGCCTAATAATGCACGTAAGAATGTACCACTTGCAAAGCTACTCATTGGAAACCTCTTTTGAAGCGATTATTGGAATTCCTGTGATTAGCATGATGGACCTCCCTCCATACCTCTGCTATGAATGTGCAACTCTTGTGAAAAAGTTCTCATTCTTCAGGGAGAGATGTCTCACCGGGCAAGCTACCTTGTATGGGATATTGCAAAGCATTGGAAAAGTCACAGAAAACGAAATAAACAAAATAGACCGTGAAAAGTGCCACCTCACATCGAATCTCTCTGCCAGATTATTCACAAACACATTCTGCACAGACGAAGTGGAACAACAGAGTGTACTTAAAGAGGAACCATCGTTACTAATACCTGATTTTGAGGTCTCCGTTGACTGTATCAAGCAAGAGGATGATTATCCCATGTTTGATGATGTGGCTGCTAAGTCCAGTGATGATGAACCACTATCTGTGAAGGTCAAAGAGAAGAAAAAGAAGAAGAAGAAGAAGAGAAAAATAAAAGAGGATATAGTATCAATGAGTGATGCTGAGAATGAGGAAGGACATGTAGAACATCCTGTAATCAACCAATTAGATAATGTAGAGCAGGACATTAAACCCTCCGTAGAAGAACTAGAGGTGCACAAACGGAAAAAAAGAGGGCGGCCGCGTAAGAATGAAGAGAAAACTGAAGTCAAGTCCAGAAGAACCAGGAACACTGGCGGCGTTCACATCGAAGACATCGATTTGGATGATTACGTCACCGTTGTCAAGCTCACACTTGAAGATCAAATGGAGGAAATAAACAAACGAAAGGATTCCCTCAACTATCAGAACGCGTCGTTCCAATGCAATCTCTGCTTCAAAGGGTTCATAGACGCTAACGCGTGGAAGCACCACGTGGGAAAACACGATCCGAGCGCAGGAGATGTCGAGTGTCCAGTCTGCAAGTTCAGGTTCCCAACAAAAAGGGCCTTGCAGAAACACGCCACAAATCATGAGAAGAAATATGCCTGTAAATCTTGTCCTTACGTTTCAAAGACCACAACTCAAGCTAAACAACATCAACGATGGCATAAAGGAGTCACATACACTTGCGAGTATTGTGACGAAGTCTCCACTAAATGGACATCATATTTGTCCCACGTCCGTATAAAACATCCGTCGTCGTTTATCTGCTCCGTGTGTGGGTACTCGTTCGTGAGCCAGCTTGGGCTTACCATGCACAAGACCATGATGCACAAGGATGTCAATGAGACGGAAAAAGCAGATAACAGTGAAGAAGCCGGTCCTTACTGTCAGGATTGCGACGTGAAATTCGTTTCCATGGAAGCGTACAACCGCCACATGGTTACATCTGTCAAACATTCGCAGAGCGATGACTTTAGTAAAGGGTGTCGTGTGTGTGGCGCCACGTTCTCGAACCCGGAGGAGCTGCGGCTGCACCACCGCAAGGAGCACGCGCGGAAGCGGCCCAAGAACTACGGCAAGAAACCCACCGGGCACTCGTGGCCCGCCGCATGCGAACACTGTTCAGAAGAAATTCCGAACGCACGCGAGTACTGGACTCACTTCCGGCGAGTGCATCCGGATAAAAACTATCCCATACAGAAGAACTACGTGTGCGACGTCTGTGGGAAGAGCTTCCGGGGCAACGCGTTCCTAATATACCACAAGCGCACGCACAGCTCCGAGCGTCAGTTCAAGTGCGGCACGTGCGGCAAGTCCTTCCACAACCGCACCAACCTGACGATGCACACGCGGACGCACTCCGACGCGAGGCCCTACCCCTGCGACGTGTGCTTCAAAGCGTTCAAGTGTAAGGGGGCACTTGACAGACACTACAGGAGTCACACCGGAGTAAAACCTTACGAGTGCGAATTCTGCGGCAAAGCTTTCGGTCAATCTAACAGTCGCAAACTCCACGTGCGTACAGTGCACCTGAAGCAGCCCGCGCCGTACGTGAGCCGCGCGCGCGCCGACAGGAGAGCGCTGCCGCAGCCCAAGCACGTATATGTGATGCCGTAG
Protein Sequence: MNNMFMCEESEHVRVCRVCLIMHVRMYHLQSYSLETSFEAIIGIPVISMMDLPPYLCYECATLVKKFSFFRERCLTGQATLYGILQSIGKVTENEINKIDREKCHLTSNLSARLFTNTFCTDEVEQQSVLKEEPSLLIPDFEVSVDCIKQEDDYPMFDDVAAKSSDDEPLSVKVKEKKKKKKKKRKIKEDIVSMSDAENEEGHVEHPVINQLDNVEQDIKPSVEELEVHKRKKRGRPRKNEEKTEVKSRRTRNTGGVHIEDIDLDDYVTVVKLTLEDQMEEINKRKDSLNYQNASFQCNLCFKGFIDANAWKHHVGKHDPSAGDVECPVCKFRFPTKRALQKHATNHEKKYACKSCPYVSKTTTQAKQHQRWHKGVTYTCEYCDEVSTKWTSYLSHVRIKHPSSFICSVCGYSFVSQLGLTMHKTMMHKDVNETEKADNSEEAGPYCQDCDVKFVSMEAYNRHMVTSVKHSQSDDFSKGCRVCGATFSNPEELRLHHRKEHARKRPKNYGKKPTGHSWPAACEHCSEEIPNAREYWTHFRRVHPDKNYPIQKNYVCDVCGKSFRGNAFLIYHKRTHSSERQFKCGTCGKSFHNRTNLTMHTRTHSDARPYPCDVCFKAFKCKGALDRHYRSHTGVKPYECEFCGKAFGQSNSRKLHVRTVHLKQPAPYVSRARADRRALPQPKHVYVMP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -