Cleg006757.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chesias legatella
Gene Symbol
-
Assembly
GCA_947359385.1
Location
OX375770.1:5378962-5390618[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0003 0.017 15.6 3.4 1 23 245 267 245 267 0.98
2 11 8.8e-05 0.005 17.3 6.7 1 23 273 295 273 295 0.97
3 11 0.0015 0.086 13.4 7.0 1 23 301 323 301 323 0.99
4 11 0.00013 0.0073 16.8 1.4 1 23 329 351 329 351 0.98
5 11 3.7e-06 0.00021 21.6 1.0 1 23 357 379 357 379 0.97
6 11 6e-06 0.00034 21.0 0.0 1 23 385 407 385 407 0.98
7 11 2.9e-05 0.0016 18.8 0.3 1 23 412 434 412 434 0.96
8 11 0.032 1.8 9.2 1.0 3 21 442 460 441 464 0.90
9 11 7.2e-06 0.00041 20.7 0.4 1 23 536 558 536 558 0.98
10 11 0.00012 0.0068 16.8 1.4 1 23 650 672 650 672 0.96
11 11 3.4e-05 0.0019 18.6 4.3 1 23 682 704 682 704 0.97

Sequence Information

Coding Sequence
ATGTGTATGCCTACGCCTAACAATGTTTCTGGTTTTGGTGGTTACTCTTGGTTTACCAGCTCAGCTGACCTCACCAAGGGCGAGGTGGACACACCGAGCAGCCTCAGCTATACACTTGGTAGCACGGTGTCACCGGAAACCACCCTGACGGTGATGTCACATAAGACTCCTCAAGTGCAAGAGAAAGTCGGCACCGTATCAGTGGCAGTATCCAACACGGGAGCTCAAGTTACGAGAGTGGTGACTTCTGGTACACCAGTTACTGCAAGGAGAGCTATGTTTGTTCTCAATGAGGCACCACATACGATAAATAGAGTGACACAGCAGAATCAGACAGCTACTATACATACAACTAACTTGGCATCAAAACCGTTCATGACACCACTCGGGCCAATCCAACTTACAGCCGAAGAATGTAATGAGATTTTGATGAAACGGGCGCTCCAAGCGCAAGGCATAGCCACGCCAGTCATAGACGCATCACAGCTGAACCACTCACTACTAAACGGAACGTTAAAAAGCCTCACCGATGGGACCACGCAGCAAACTCAGCAGCAAGAGACAATACAGACAACGACAGTGCAACATAGCCTGTTACATACTAAACAGGAGCCAGGGACAACAAATAACTCACCCAAGACGGTATTCTCGCAGACGGAGCTGATGTCGAGCAACTCTGTGCTGATCCCGGGCGCGCCGCAGCTCGCCACGCCACCGGTCAAGGAGCGGCCCTACTCCTGCGAAGAGTGTGGGAAGAGCTTCCTCTTGAAGCATCACCTCACcacgcacgctagagtgcatactgGTGAGAGGCCCCATGTTTGCGCGCACTGCGGCAAGGCGTTCGCACGGAAACACTGTCTCAACACGCATATGTTGCTGCACTCTGCTGAGAGGCCGTACAAGTGTCACGAGTGTAAGATGGCGTTCACACTGAAGCATCATCTCGTCACGCATTCTAGGGTGCACAGTCGCGACCGTCCGTTCGTGTGCAACGAGTGCGGGCGCGGGTTCCCCCTGAACCGGCACCTCGTCACGCACAGGAAGTACCACGCGGGCGAGCGGCCCTACGTCTGCAACGACTGTGGAGAGAGCTTCGCACAAAAGGATCATCTAGTGATGCATAGTCGTTTCCACGGTTCGCTGTCTCCGTTCGTGTGTCCGGACTGCGGCGCAGCGTTCGCGCGCAAGTTCCAACTGGTGAACCACGGGCGCGTGCACGGCCGCGTGCCGCACGCGTGCCCCGTGTGCGGGAAGGAGTTCCTGCAGAAGCGGACCCTAGTCGCGCACATGAGGATACACACCGGTGAAGGCGTTGTTGCGTGTCTAGAATGCGGCGAAGCGTTCAAATGCAAGAGCGATTTGCAGCAACATGCAAAAGCGACGCGACACTGCATGTTCGGCACGCCCGCACAGACTATACAACAGGTCGATCAACAGCAGCAACAACAACAGCAGCAACAGCCGCAACAGCAACAGCAACAGCAACAACAGCAGCAACAACAACAACAGACAACAGTAATAAAGTCAGACGAATTCAAGCCACAAATTGTACAAATAATCGGTGCTGATGGTCAGATCGTATCTGAAAAAACGAGTCCCGGATACCCTTGCCCGGAATGCGGATCCTGTTTCAATAACAAAGAGGCGCTCTCGTTGCACGTGCGCATGCACGCGGGCGACCGCACGTGCGTGACGGACCTGTGCGCGCTGACGGCCGCGCTGCAGCCGGGGCTCGTCGCGGCGCACTCCAACAACCAACGTACGTACACTCGTAGCGAGCGCGAGCACGAGTGCGAGCCCGAGCGCGAGCGGTGCCTCCTGCCTGACAGCTCGAGACGTGCCGCCTCTAATCAGCCAATACAGATTATTTCATCGAATCCCAATAATGTTGTCCACACGCAAGTTATAGCAACGAATCACCACGTAGCGCCTCGGCCGAAGATGCACTTTTGTGGCGAGTGTGGCAAAGGGTTCGCGGCGAAACATGGCTTGCTGGCGCATCAAAGGAGACATCCGGACGGTAGCTGCACGCTGCGCACGCACGTATGCGACCAGTGCGGGAAGGCGTTCTTCCAGAAGAACCATCTGATGCTGCACCAGCGGCAACACATGGACCTCACTAGAAATGTCTCCGTCAAGCAGCAGCAGCAACAACAACAGCAACAGCAACAAACGCAGCAAGCGCAACAGATCGCCCAACAAGTCGTCCAACAAGTCCAGCAACAGGTGCAACAACAACAACAACAACAACAACAACAAGTGCAAGTACAACATCAACAGACCAGTATGGACATAGATCAGGATCACCAACAACCAACGCACATACAGGTGGTGAATCGGTCGGGGCAAGTGATTGGAAACCAAATAATAGTGGACGTGGGTGGGGTGGGGCGGCGGCTCGTCGGGCCGCACGTCATCACGATGCCGCGCGACAAGCCGCTCGCGCACAAGCACGCGCAGCGACACCACGCCGCCAGCGGCGACGTTAAAGATCTGGGCGGTCTAGTGCTGTCGGCGGGGCGCGGGAGCGGACTGATCAAGTACGAGATATCGATCCCGCCGCCCAACTCCGCCGTGCAAGTACAGCAACTGGACTGA
Protein Sequence
MCMPTPNNVSGFGGYSWFTSSADLTKGEVDTPSSLSYTLGSTVSPETTLTVMSHKTPQVQEKVGTVSVAVSNTGAQVTRVVTSGTPVTARRAMFVLNEAPHTINRVTQQNQTATIHTTNLASKPFMTPLGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHSLLNGTLKSLTDGTTQQTQQQETIQTTTVQHSLLHTKQEPGTTNNSPKTVFSQTELMSSNSVLIPGAPQLATPPVKERPYSCEECGKSFLLKHHLTTHARVHTGERPHVCAHCGKAFARKHCLNTHMLLHSAERPYKCHECKMAFTLKHHLVTHSRVHSRDRPFVCNECGRGFPLNRHLVTHRKYHAGERPYVCNDCGESFAQKDHLVMHSRFHGSLSPFVCPDCGAAFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMRIHTGEGVVACLECGEAFKCKSDLQQHAKATRHCMFGTPAQTIQQVDQQQQQQQQQQPQQQQQQQQQQQQQQQTTVIKSDEFKPQIVQIIGADGQIVSEKTSPGYPCPECGSCFNNKEALSLHVRMHAGDRTCVTDLCALTAALQPGLVAAHSNNQRTYTRSEREHECEPERERCLLPDSSRRAASNQPIQIISSNPNNVVHTQVIATNHHVAPRPKMHFCGECGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLTRNVSVKQQQQQQQQQQQTQQAQQIAQQVVQQVQQQVQQQQQQQQQQVQVQHQQTSMDIDQDHQQPTHIQVVNRSGQVIGNQIIVDVGGVGRRLVGPHVITMPRDKPLAHKHAQRHHAASGDVKDLGGLVLSAGRGSGLIKYEISIPPPNSAVQVQQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-