Basic Information

Insect: Chesias legatella
Gene Symbol: -
Assembly: GCA_947359385.1
Location: OX375792.1:3424557-3429006[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.011 0.63 10.7 2.7 1 23 156 178 156 178 0.94

2 13 7.5e-05 0.0043 17.5 1.8 1 23 184 207 184 207 0.97

3 13 4.5e-06 0.00026 21.3 3.7 1 23 213 235 213 235 0.98

4 13 8.1e-05 0.0046 17.4 0.6 3 23 243 263 241 264 0.94

5 13 0.0001 0.0058 17.1 3.2 1 23 269 292 269 292 0.97

6 13 0.00018 0.01 16.3 3.5 1 23 317 340 317 340 0.98

7 13 0.00015 0.0084 16.6 2.9 1 23 345 367 345 367 0.95

8 13 7.4e-06 0.00042 20.7 0.5 2 23 373 395 372 395 0.96

9 13 0.0032 0.18 12.4 3.0 2 23 402 423 401 423 0.96

10 13 1.5e-05 0.00083 19.7 6.9 1 23 429 451 429 451 0.99

11 13 2.2e-07 1.2e-05 25.5 2.7 1 23 457 480 457 480 0.95

12 13 0.0002 0.011 16.2 0.5 1 23 486 508 486 508 0.98

13 13 0.079 4.4 8.0 7.2 1 23 514 536 514 536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.011	0.63	10.7	2.7	1	23	156	178	156	178	0.94
2	13	7.5e-05	0.0043	17.5	1.8	1	23	184	207	184	207	0.97
3	13	4.5e-06	0.00026	21.3	3.7	1	23	213	235	213	235	0.98
4	13	8.1e-05	0.0046	17.4	0.6	3	23	243	263	241	264	0.94
5	13	0.0001	0.0058	17.1	3.2	1	23	269	292	269	292	0.97
6	13	0.00018	0.01	16.3	3.5	1	23	317	340	317	340	0.98
7	13	0.00015	0.0084	16.6	2.9	1	23	345	367	345	367	0.95
8	13	7.4e-06	0.00042	20.7	0.5	2	23	373	395	372	395	0.96
9	13	0.0032	0.18	12.4	3.0	2	23	402	423	401	423	0.96
10	13	1.5e-05	0.00083	19.7	6.9	1	23	429	451	429	451	0.99
11	13	2.2e-07	1.2e-05	25.5	2.7	1	23	457	480	457	480	0.95
12	13	0.0002	0.011	16.2	0.5	1	23	486	508	486	508	0.98
13	13	0.079	4.4	8.0	7.2	1	23	514	536	514	536	0.98

Sequence Information

Coding Sequence: ATGAGTGATTTGTTAGTTTGTAGAGCCTGTTTATCGCATAATGTCAGAATGCATGCAATTGGCGACACCCGTTACCAGGAGATGTATGAAAAACTCACAGGTGACAAGCTCAACATAGCAGAAGGAACGCCCAGCACCGTCTGCTACATCTGCAACTCTCATCTGCAGAAGTTCTGCAGGTTCTTTGAGGTCTCGCGGGCGGCTGAGAAATATCTCACACAGCTTCTACTTAATGGAGTGAAGTTGACACAAGACTCGCTGAGCTCAACACAGCGTCCCACCCTGAAGTTATCTCTGAGCGATGTGAAGTGCACAACCACACATAATGTGCACAAGCCAACCCAAGTGTCCGTGCAAGTTAAATGTGAAGTGTTTAACGATATCAAAATGGAAGATTCAACAAACGAGCAAACAGCTGATAATGACAAGGATGAATATGTGTCGGATTCAGCGCCAGAGAAGCCATATCTCTGTCCGTGCTGTGATAAAAAATTCTTAACGAGCAACGGATTGACAACACACTTAAGAACTCACCCCGGAGGCTGGTCGTTCCCGTGTGGAGTTTGCAATAAGGAATTCCACTCCAAAAGGGATCTGAGAACACACCGGATGTCGGTTCACACCAAGGACAGACCGTTTCCATGCGAGTTGTGCAAGAAAAGCTTCAAATTTAAAACCCATTTGACGGACCATCTCAGAGTTCACACCGGGGAGAAGCCATTTGGCTGTCCGGTCTGCGACAAAAAATTCATTACAACGAGCGGTTTAAAAATCCACGTTGTGAGACATCACTCGGATAGAGAGTTCAGGTGTCAGAAATGTCGGATGAAGTTCAAAACTAAGAACGAGTTGACAACGCATACAAAAATTGCACACTTTCAGATAAATCTTGTTCTCAACGGTGAGAAGTCTTTTAAAAGTGATGAACACACATCGGACACCGCACAGTTCAGTTGTGACAAATGTGATTTGAGTTTCAACGACAAAACTTGTCTCATATACCATTATAAAACGATACACAGCGCTGTGATATTTGTATGTGAGAAGTGCGGGCAACGGTTCAATACAAAAATCAATCTCGAATCCCACTGTAAAATGCACTCTGAGAATTCGGTCGTTtgtgaaatatgcaacaaaaaactcagcactcagttgaatcttagaaaacacatgatgagaattcacaccggtgagaggcctttagtgtgtgaagtgtgctgcaagggtttctgcgataaggtaaccttaaaaaatcacatggtgacccacaccggagagaaaccgttcaaatgccacgtttgtgacaaaaggttctacctgaaatgcaacttaaagaatcacattagaatccacaccggggaaaagccattttcctgtgaccgttgcgggaagatgttcagtcagaagagccatttgaaaactcatatgattcttctccacactactgagaagccgtacgcttgtgaccgttgcgttatgaggttcaacatgaaagcttctctccgggaacatataaggacccacacaggagaaaagccatatgcgtgtgaaaggtgcgacaggaggtttaGATGTAGAAAGAGTTATACTAAACATAAAAAAACTCATGCATAG
Protein Sequence: MSDLLVCRACLSHNVRMHAIGDTRYQEMYEKLTGDKLNIAEGTPSTVCYICNSHLQKFCRFFEVSRAAEKYLTQLLLNGVKLTQDSLSSTQRPTLKLSLSDVKCTTTHNVHKPTQVSVQVKCEVFNDIKMEDSTNEQTADNDKDEYVSDSAPEKPYLCPCCDKKFLTSNGLTTHLRTHPGGWSFPCGVCNKEFHSKRDLRTHRMSVHTKDRPFPCELCKKSFKFKTHLTDHLRVHTGEKPFGCPVCDKKFITTSGLKIHVVRHHSDREFRCQKCRMKFKTKNELTTHTKIAHFQINLVLNGEKSFKSDEHTSDTAQFSCDKCDLSFNDKTCLIYHYKTIHSAVIFVCEKCGQRFNTKINLESHCKMHSENSVVCEICNKKLSTQLNLRKHMMRIHTGERPLVCEVCCKGFCDKVTLKNHMVTHTGEKPFKCHVCDKRFYLKCNLKNHIRIHTGEKPFSCDRCGKMFSQKSHLKTHMILLHTTEKPYACDRCVMRFNMKASLREHIRTHTGEKPYACERCDRRFRCRKSYTKHKKTHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -