Cleg002213.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- ZNF217
- Assembly
- GCA_947359385.1
- Location
- OX375791.1:670646-684864[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.49 27 5.5 0.0 3 23 134 154 132 154 0.95 2 14 0.008 0.45 11.1 1.2 1 23 252 274 252 274 0.99 3 14 1.4e-06 8.1e-05 22.9 0.9 1 23 280 303 280 303 0.96 4 14 0.032 1.8 9.2 5.6 1 23 308 331 308 331 0.93 5 14 2.6e-07 1.5e-05 25.2 1.4 2 23 506 527 506 527 0.97 6 14 1.8e-05 0.001 19.5 1.2 1 23 533 555 533 555 0.98 7 14 0.00022 0.013 16.0 4.2 1 23 621 643 621 643 0.97 8 14 0.26 15 6.4 2.2 1 23 678 700 678 700 0.92 9 14 4.9e-06 0.00027 21.2 0.6 1 23 708 730 708 730 0.96 10 14 0.022 1.2 9.8 2.2 1 23 739 761 739 761 0.98 11 14 7.8e-05 0.0044 17.5 0.7 3 23 819 839 818 839 0.98 12 14 0.057 3.2 8.4 6.0 1 23 856 878 856 878 0.95 13 14 2.5e-06 0.00014 22.1 0.7 1 23 884 906 884 906 0.98 14 14 5.4e-07 3e-05 24.2 3.1 1 23 912 935 912 935 0.98
Sequence Information
- Coding Sequence
- ATGAATAATGTTGCGACGGATATGGATCCGCTGAGTTATGAAGCTCAGTATGGGTATCAACCTACAGTCTACCCACTTCAGCCGAACATCCCTTATCCATACAAAGATTACTACCCTCACGTACCTTACAACATACAAAGCAACGTACCGAACAATATACAGGCCACAGAACCGGTAATAGCTGATACACAACCTCTAAATCGAGCAACGGACCCAACATCTATCAACAATGTCCCAAATAACCATCCAGACACTGGTAATAACGTACCAACTGCAGAAGAAGAGGACATAAAACCTGATATAACACAGTTGAAGCCGAAAAGGGACAAAAAACTCCGGGGTAAAAGAAGCAGTTACTGGAATAAAAAGATAGCAGACAAAGAATTTAAGTTCTACGGCTGCGCTATCTGCAATATATCATTCCAGGAACTTACGGAACTGGATTCCCATGTGACAATTCACAGCAACCGTATAACAAGTTATGACATACGAATACAGAATCTAAAGAAGCGAAAAAGACTTAAGAAAGAGAAAAAAAGGAAAAAGAAAGAATCCAAGGTTAAAAATGAGTTCGATTTGGAAATTAAACCGGAGGATGGTTATATTGGGACAGAAAAAGCGGAAAACTATAACTCAGACGTTAACGGAATTGCTCAAGATAATAAAAGTAGTGAAGATATTAAAAATACTGATGATAATATGAGTAGTAAAAAAAACAGTAGCGAGAAGGAGAATAATAAAAAGAATGAAGTCTACAAATGTTTCGCTTGCAGCAAACTGTTTGCGTTAAGCTACTATTTGAAAATACATGTGAGATCTCACACTGATGAGAAACCGTACGTCTGCAATTATTGCGGCCAGACATTTATAACAGCGAGCAAACTGAATCGACACAACAAACGTATACATTTGGCTGTCCGACACCAGTGTAGGATATGCTACAGGTTTTTTAGCAGATTTGAACTCCTCACAAAGCATTTTGACAAGAAACATGAAGAACAGAAATTGGACGGTGAACCATATGATTACAACGCGATTCTGCCATATTTGACGGAACTTGAGGAGCAATTAAAGATGGAGTCTGAGGAGAAGAAGCCCAAAACTGAGGGTCTGTGGGAGGGGGAGGGGGAGTTGGAGGGGGAAGGGGCGTGGCCTCGCAACCCCGAACTAACCAAAATGGAAGGTGCTAAAGTGGAGAAAAAAGAAAAAATAAACACATTATTGGAGATATCTTTAAAAGAAGATTCAGACCGGGAGAGAAGTGAACAGAAGATAGAAGAAGTTAATATGGATCTGAAGCAGGAGTACGTTGAGTCCGAGGGCGAAGCGCCGCAGCCGATGGAAGTATTCGAACCCGCGTCCTCCGATGAAGATCCCGTTAAAGATGAAAGACAGATGGACACTGATGAGGAGGAGTACTTCCCCCCGGAGGGGTGGGCGCGCCCCCCCGCGCTCGCCGTACCCCCCGACCCTCCCTCCCCGCCGCCCCCCTCCGCCAAGCGCGAGGGGCCAGGGGTGTGCGACCTCTGCAACAAGAGTTTCAGTAGTAAATCATATTTGAAGATACATTTGAGGACGCATACTGGTGAAAAACCCTTTCCGTGCTACATATGCGGCAGGAGTTTTATAACTGCGAGCAAAATGCACAGACATGTTTTAACCCACGACGAAAGTTGGTCCGGTGAAAATGCGATAAAACCTGAAGGGGCTGATGTCAAATCCGAAAACGAAGCAGACGACATTGATAGCGGGAAAAAACTTAAAAGAAAATCGAAAATAGACAAGGCCAAAGCAAAATTGCTCAAAAAACCGAAGAAGAAAATTGGTGTCAAAACTGCGAAGGAGAAATCTAATCGACCGCATTCATGTGATTACTGCGATAAGAAATTCCGACATATTGAAACTCTGCAAGTCCACGCGAAATCCCACGAAGGGGAAGAACTGGTTCTAAAATGCGTGTACTGTTTGGAGCCACAACTCGATCGTGAAATGAAATCGGAACACGAAGCGACACACACCGGACCGAAGCGATATCTGTGCACGTTATGCGGACGTCAGTATAAGGACAAAGGCGCTATGATATGCCACAGAAAGAACCACAAACCTAACAGCGAGAAACTATTCATCTGCGACATTTGCTCGAAGAGATTCAACACTCAGGCGAAATTACAACGGCACATCGTCTCGCACACCAGCGAAAAATTCGTGCTCCGGTACGAGTGTCCCGTGTGCGCGAACATGTTCCACACGCGGTGGCACGTCCAGATGCATCTCAAGTCACACCAGAAGGAAGGCTTAATATTGGAAGAGAATCGAAACGCTGTACTGGCGATGGTTCTACAAAATGCGCGGAAGATCCCCAAGTCCCCTGAGGCGGGGCAGGGCCGGGGGCAGACCCAAGGGGTCAGGAGCGACCCCCCGGAACAGATACCCAGCGACGAGAGGTCCCGGATATGCAATATTTGCGGGGAGGTGTTCCAGCATTTCTACTATCTGGAGGAGCATTTGAAGACTCACGGATCCAGGATAGCGGTCGAGGATCTCGACAGAGAGGAGGAGAAGAAGCATATCTGCCAGGTTTGCTCCAAGTCTTTCAAACTTCATTATTATTTGAAACTGCACAGTTACACTCACACGAAAGAGAAACCTTTCATATGTCAGCAGTGTGGGAAGGGCTTCATCACGAGGGGGAAGCTGAAACGTCATCTGGAGACGCACCAGGGTCTCAAGAAGTATCAATGTCACATTTGCTACAAATTCTTCACACGGCCGAGTTACCTTCGCATCCACGTACGCACCATACACGGAACACAGGACTACAACTTTATGGATTATGGATTGGGTGTTCCCATAGGCTTAGGTGTCCCTTTGGGTCAAATGAACGATAACAGTTTGTAA
- Protein Sequence
- MNNVATDMDPLSYEAQYGYQPTVYPLQPNIPYPYKDYYPHVPYNIQSNVPNNIQATEPVIADTQPLNRATDPTSINNVPNNHPDTGNNVPTAEEEDIKPDITQLKPKRDKKLRGKRSSYWNKKIADKEFKFYGCAICNISFQELTELDSHVTIHSNRITSYDIRIQNLKKRKRLKKEKKRKKKESKVKNEFDLEIKPEDGYIGTEKAENYNSDVNGIAQDNKSSEDIKNTDDNMSSKKNSSEKENNKKNEVYKCFACSKLFALSYYLKIHVRSHTDEKPYVCNYCGQTFITASKLNRHNKRIHLAVRHQCRICYRFFSRFELLTKHFDKKHEEQKLDGEPYDYNAILPYLTELEEQLKMESEEKKPKTEGLWEGEGELEGEGAWPRNPELTKMEGAKVEKKEKINTLLEISLKEDSDRERSEQKIEEVNMDLKQEYVESEGEAPQPMEVFEPASSDEDPVKDERQMDTDEEEYFPPEGWARPPALAVPPDPPSPPPPSAKREGPGVCDLCNKSFSSKSYLKIHLRTHTGEKPFPCYICGRSFITASKMHRHVLTHDESWSGENAIKPEGADVKSENEADDIDSGKKLKRKSKIDKAKAKLLKKPKKKIGVKTAKEKSNRPHSCDYCDKKFRHIETLQVHAKSHEGEELVLKCVYCLEPQLDREMKSEHEATHTGPKRYLCTLCGRQYKDKGAMICHRKNHKPNSEKLFICDICSKRFNTQAKLQRHIVSHTSEKFVLRYECPVCANMFHTRWHVQMHLKSHQKEGLILEENRNAVLAMVLQNARKIPKSPEAGQGRGQTQGVRSDPPEQIPSDERSRICNICGEVFQHFYYLEEHLKTHGSRIAVEDLDREEEKKHICQVCSKSFKLHYYLKLHSYTHTKEKPFICQQCGKGFITRGKLKRHLETHQGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFMDYGLGVPIGLGVPLGQMNDNSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -