Cleg008812.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chesias legatella
Gene Symbol
-
Assembly
GCA_947359385.1
Location
OX375780.1:2101152-2108787[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.00061 0.034 14.6 1.1 1 23 194 217 194 217 0.94
2 29 0.0016 0.091 13.3 1.8 3 21 249 267 249 268 0.95
3 29 0.00012 0.0068 16.9 0.3 2 23 300 322 300 322 0.97
4 29 0.67 38 5.1 0.2 3 21 341 359 339 360 0.89
5 29 0.0031 0.17 12.4 1.5 1 23 370 393 370 394 0.97
6 29 0.01 0.59 10.7 0.1 1 23 410 432 410 432 0.96
7 29 0.00015 0.0085 16.6 1.4 2 23 476 497 475 497 0.95
8 29 0.00015 0.0083 16.6 2.0 2 23 541 563 541 563 0.97
9 29 5.7e-06 0.00032 21.0 1.3 1 23 613 636 613 636 0.97
10 29 0.00027 0.015 15.8 0.1 1 23 691 713 691 713 0.97
11 29 0.00022 0.012 16.1 4.0 1 23 724 746 724 746 0.99
12 29 0.055 3.1 8.5 1.5 2 23 758 779 757 779 0.96
13 29 0.0031 0.17 12.4 0.7 1 23 789 811 789 811 0.98
14 29 0.18 10 6.8 6.0 1 23 840 862 840 862 0.92
15 29 0.001 0.056 14.0 4.8 1 23 873 895 873 895 0.98
16 29 0.0014 0.08 13.5 1.0 1 23 903 925 903 925 0.97
17 29 0.00017 0.0094 16.4 0.2 2 23 945 967 944 967 0.97
18 29 0.0019 0.1 13.1 1.6 1 23 985 1007 985 1007 0.97
19 29 0.53 30 5.4 0.9 2 23 1047 1069 1046 1069 0.87
20 29 0.0034 0.19 12.3 0.2 2 23 1092 1113 1091 1113 0.95
21 29 0.71 40 5.0 0.2 2 20 1117 1135 1116 1136 0.91
22 29 0.093 5.3 7.8 1.4 2 23 1156 1178 1155 1178 0.96
23 29 0.33 18 6.0 0.1 2 23 1194 1215 1193 1215 0.91
24 29 0.00067 0.038 14.5 0.9 1 23 1253 1276 1253 1276 0.96
25 29 3.8 2.1e+02 2.7 6.1 2 23 1293 1311 1293 1311 0.89
26 29 3 1.7e+02 3.0 2.8 2 21 1315 1334 1314 1335 0.93
27 29 0.16 9.1 7.0 2.1 2 23 1383 1404 1382 1404 0.94
28 29 0.0039 0.22 12.1 0.6 2 23 1415 1437 1414 1437 0.96
29 29 0.13 7.6 7.3 1.6 2 19 1475 1492 1474 1495 0.92

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTCGGGGATTTCTACTCCATATTCGCGGCAGACAATGACATTCAGCTGGCCGAGATGGTCATGGAATGTACCAGAATAAAGGTATACGAAGGAGATGGACTACCAGATAAAGTGTGCTCTGAATGCGTACAAAAGCTCAGCAGTGCATACATATTCAAGCAGCAGTGCGAGAGATCGGACCAGGAGCTACGCCGCAATTATGTTCCACCGCCAGGATTCAGCATCAGCCCCCCACCGCCGCCGAATCGGCAAAGCAGCGACTCAGCCTTCTCTACGCTCACTGATAGCTCAAACCTTAAATCCTCCTTCACCGAAACCAAAGTAACACCGGCTAGCAGGAGCAGAAAGAGAAGCGTCGAAAGCGACAATGCCTCTGTAGGCAGCCGTTCGCACAGCCGACCCAGCAGCTCCAAACGAGTCGAAGAACTGAGGAAACAACCAAAACGCACCCGCTACTCCGACGACTCCGACTACAATGACAACGGTGCGTCCAGCTTTGTCGGCGGAACAGACTCGGATGAGCCGCTTCTGAAAAACGAATTCCCGTGCCCGCATTGTCCGAAGACATTCAAATGGAGAAAGAGTCTCAAGATGCACTTGGCTAATATACACGGCAAGAAGGCCAGTCTCGGAGACGATGCCGTTGTCAACATTCCGAAGAAAAGCCTCGAGAGCGAGCCCGACAGCGACGACCAGCAGCTCGGTTGTCACAGATGCGGCAAAACGTTCAAACTGAAGATCATGCTGAAGCGGCATCAAGAGTCGTGCGCCGTGAAGTCACCGTTAAAATCGCCCATGAAGGAATTGCTCATAACCCTGGAACCGATCGACGCAGTGCAGCAACGCTCGAAGAAACCGACCTGCGAATACTGCACGGCACAGTTTAAGACCGTTGACAACTTGGAGAAACATCTGAGGGTCGTCCACGCCGCGGTGCGTAAGAGAGAGAAAGTGGAAAACGAACCGAAGGGTCCACTTATATGCATTTATTGTAATAAAAATTTCGAGGATTACTATTTGTACAGTTCACATTTGAACTCGTGCCCGATGAAGGACAATCGCTCCGCTTTCCAGTGTCCTATGTGTCCGAAGCTGTGCTCCCGTGCAACCGGGTACGCGTCCCACGTAAGAAGCGCTCATCACGAAGGGCGCAAATCGGACGTGGCTTCCGTGGATGAAGGTCAGACCTTCGAATGCCGCATGTGCAGCAAGAAACTGGCCACTCAAGCATTGCTCATCACGCACTTGGCCGCTCACATGTCGAAGATCGACGACGATGACAACACCGCTGATGATTTTGACTCGAGGGGGGACACAATGGACGACTCGATGTCTGTCCAATCCGCGCACAGCTCGCAGACGTCTCAGTTGGCTTCGGGTCCTCTCAAATGTCGTATCTGTGATAAAGAGTTCAAGTATAAGAAATCGCTGGAAAATCACGAAGCGAAACATTCCGAAGATATTGTGTCGGTGAAGGGCGAGCCACACGACAAGCAGCCCGATTTGCTCACGGAAACCAACCAGGCGTATATGAAGGAGTTCGATTCAGAATCTAGTCAAGAGGAAGGCGATGAAGATAACACGTGTGATATTTGCGAAAAGAATTTTTCTTACAAACGACTGCTCATACAACATAAGCGTACAAAACACACCATGGTAGCTGGGATGAAGCGGGCTAAAATAAGCCTTAAAGATTGCTCCGTAAGGTGCCTCATTTGTGAGGAGGAGATGAAAGTGAGCGATATCAATGAGCACAATCAGAAGCATATTTCGGTTAACATAAAACCGAGGAACATTTATACTTGCGCCGAGTGCGGCCAGAAATTCAAGAGCTGCAGTAACTTGGCCAACCATATAAAGTTGGTTCACAGACTGAAGCAACAAGAAGTGCCAAAGCAATTTCTAGGTGTTGATATGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGATGAATCCCAGAGTCACAACGGCTTTGGAGAGGTTCCGTTGAATTCAGCGCCTACAGTTAATCTGACGGGGTTCACATGTCCCATCTGTGGGAAGAAGATGCCCACTCTGGTGTCTCTCAAGAGACACGTCAATTGGCACTCGTTTGTCGGCAACAATTTGGAGTCCAAATACGAGTGTTTCGTGTGTAAAGCGAGCTTCAAATTCAAAGGGCACTACAAGATCCACATGCGTTCGCACTACCGAGACCCGAACCTGGAGCCCGCGCTGCTGACGTGCTCCGTGTGCGGGCGCAAGAGCAAGCACCTGCGCGCCGCACAGATGCACATGAACTACCACAAACAGACGCGCTTCCAGAACAAAGACTACCAGTGCTCCATCTGCAAGCGCGTGTTCGAGTTCCGGCGCGTGTACCTCTCACACATGGCGATCCACTACAAGAAGGGCGAGAGCGACCAGAACACTATCGTCGGTGACATGGTTCCCAACAATCAGGATCCAGCCAAATTTGACGGCACTTTCAGGTGCCACATATGCGGCAAAGTTTGCGACTCCGAAAACTCGCTCAAGTGCCACACGAGCTGGCATAAATCCAAGACTCTCCTGTACGGTTCGCGACACGAGTGCCAGATGTGCGATCTCCAATTCACAAACAAACGGCACCTGGTGCTCCACACGCGCTCGCACTACGAGGACCCCAACGGAGAGTTCAAGTGCAACGTCTGCGGGAAGGGTTTCATCGACGCGGAGTATCACAGGCGGCACGTCAAGGGACACAACTTCGACCACCAGTCCCATAAGAAGAGATTAGAAAAACTGCGCAAAGACAAAGTTAAATGTCCGATTTGCGATCGGTACTACCCCGATCTGGTGAAGCTGATTCGCCACCTGCGCCGGACCCACCCGGAGAGCAAGATGATAAAGGAGGATCCCGATGCCGCCCCGCCCAAATACTACTCCTGCAAACTGTGCGCAAAGACCTTCCGCGACGAGAGGAGACTGAAGAACCACGAGGATACCCATCTGCGCAAGCCCAGCTTCGTCAAATGCAAATTTTGCGGCCGCAACTCCTTCTCCATGAAGTTTCATCATTTACACATAAAGAGTCACTTCACCAAGAAGTATGTTGAGAAACCATTGAAATGCCCGCAGTGCGATGAACTTTTCACGTGGGGGTACGCGTTGCACCACCATTTGCGCGACGTGCACGGAATTAACGAGACTTGGATCGCCGAGCGGACCGAAGCTACTCTCGAGGGTCCGCTGAAAGATCTGCAATGCTCCGTGTGCCTGAAGGTTCTCGCCAGCAAAGGCAACTTCGAACGCCACATCGACTACCACAATGTGTTACGATGCAACTACTGCTTCGCCTTCTTCAGCTCGTTGCGATTCCTCGAAGGGCATCTCGCCTTCTCCTGCGATAAGAAAAAACTCGTCGGCGACACCGATCCGTATCCGAAGCGAGTCAAATGCGAGGTGTGCTACAAGGCGTTCAGCGTTCAAGTGAAGCTCGACTGCCATCTCCGCACGCAGCACGACATCAAAGTTAACAAGCAGCAGTCGAAGGGTAAAGAGGATCTGGTTTGCGATTACTGCTTCAAACTGTTCGAGAACGAAGACGCGCTCGCCGGCCACAAGGTGTACCACCGCACAGTGGGCTACTTCGGCTGCATCTACTGCCCCAGGAAGTTCAACACTACGACACGTTACATGAAGCACAAGAACCATCACTTGGCGGTGCACAACGTCGATGATCCGTTCAAATGCGAACACTGCGACGAAACATTCGTCCCCTTCAGGGATATGATAACCCACATGAAGGAAGCCCACGGCGACGACAAAGAATGGATCGTGATGCCCAAGGAATCCGTCGAGGAGACTTGTACCATCTGTCATAAGACCTTCTTCAATCTACACCGGCACCTGGATTACCACGAGGAAAATAAATGCAAGAAATGTAACGAGTATTTCTTTTCGACGACGGACTTTGACAACCATCTGTGCGCCATCGAGAGTGATGCCGAAGAGGCTCCGGGCGTCCAGACTCCCGGGATGCCCTATCAGGAGTGCACGTTTTGCTTCAAGCCCATCACGAAGAAGGACTCCAAGAAGAAACACGACATTCTACACGGAACTTCAGGCGTCATTTCGTGCAGATTCTGCCATCTCAAATTCAGAACTCTCGATGCGTTCAATATACACGCGTTCTCGCACCGCAGCAGAAAATACAACAAGAGACCGATAAAGTGTCGCGTGTGCAACGAACGGTTCGTGAAGTACGGGCCGTTCATGAGACACATGAAGAGTGTCCACAAAACCACGAAGAAGGTCCACTACCGCGCGCTCGTCCGGCCGGCGCGCTGCGTCATCTGCGGGGACACGTTCCCGAACTTGCACAACCACTACCGAGCGCACCTGACCAACCAGTGCCAGGGCTGCTCCAAGTACTTCACGTCCTCGAAACTGTTCGCGGAGCACGAGTGCGACAAGATTGACAAGGACCACACTAAAGTGTTCACTTCCGATGAAAACTTGAATGCGCTCATCGACTCGTACGTCCCCGAGGAGTTGGCGGATGATGAGAAGTTCTACGGTTACACCGATGACGACGAGGAAGTGGAGACGAACTTGCCGGAGGCGATGACTCGACCTCGAGACGAGGAGGTGAAGAAAGCGATGAACGGGCCCCACTCGCTGGGACCGCCCCGGCCCCAGCAGGACACCGAGGAGGCCGAGTACGAGAGGAACTTGCACATGATGGTCCAGTCGCCGATAATATCCGACGTACTGTCGCTGTTTGAGAACGCGACCGAGGGCACTCAAGATAACAAAGACCAGACGTTTTTGGGAGAAATAGTCAATCTCACTGATGAGGATTCGATGGACGTGCACGACGTTGCGCCGCCGACAGTGCTCGTCATCGACGATTAG
Protein Sequence
MALKLGKCRLCLKLGDFYSIFAADNDIQLAEMVMECTRIKVYEGDGLPDKVCSECVQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPPNRQSSDSAFSTLTDSSNLKSSFTETKVTPASRSRKRSVESDNASVGSRSHSRPSSSKRVEELRKQPKRTRYSDDSDYNDNGASSFVGGTDSDEPLLKNEFPCPHCPKTFKWRKSLKMHLANIHGKKASLGDDAVVNIPKKSLESEPDSDDQQLGCHRCGKTFKLKIMLKRHQESCAVKSPLKSPMKELLITLEPIDAVQQRSKKPTCEYCTAQFKTVDNLEKHLRVVHAAVRKREKVENEPKGPLICIYCNKNFEDYYLYSSHLNSCPMKDNRSAFQCPMCPKLCSRATGYASHVRSAHHEGRKSDVASVDEGQTFECRMCSKKLATQALLITHLAAHMSKIDDDDNTADDFDSRGDTMDDSMSVQSAHSSQTSQLASGPLKCRICDKEFKYKKSLENHEAKHSEDIVSVKGEPHDKQPDLLTETNQAYMKEFDSESSQEEGDEDNTCDICEKNFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSDINEHNQKHISVNIKPRNIYTCAECGQKFKSCSNLANHIKLVHRLKQQEVPKQFLGVDMADFCEVVVTKAEPLDESQSHNGFGEVPLNSAPTVNLTGFTCPICGKKMPTLVSLKRHVNWHSFVGNNLESKYECFVCKASFKFKGHYKIHMRSHYRDPNLEPALLTCSVCGRKSKHLRAAQMHMNYHKQTRFQNKDYQCSICKRVFEFRRVYLSHMAIHYKKGESDQNTIVGDMVPNNQDPAKFDGTFRCHICGKVCDSENSLKCHTSWHKSKTLLYGSRHECQMCDLQFTNKRHLVLHTRSHYEDPNGEFKCNVCGKGFIDAEYHRRHVKGHNFDHQSHKKRLEKLRKDKVKCPICDRYYPDLVKLIRHLRRTHPESKMIKEDPDAAPPKYYSCKLCAKTFRDERRLKNHEDTHLRKPSFVKCKFCGRNSFSMKFHHLHIKSHFTKKYVEKPLKCPQCDELFTWGYALHHHLRDVHGINETWIAERTEATLEGPLKDLQCSVCLKVLASKGNFERHIDYHNVLRCNYCFAFFSSLRFLEGHLAFSCDKKKLVGDTDPYPKRVKCEVCYKAFSVQVKLDCHLRTQHDIKVNKQQSKGKEDLVCDYCFKLFENEDALAGHKVYHRTVGYFGCIYCPRKFNTTTRYMKHKNHHLAVHNVDDPFKCEHCDETFVPFRDMITHMKEAHGDDKEWIVMPKESVEETCTICHKTFFNLHRHLDYHEENKCKKCNEYFFSTTDFDNHLCAIESDAEEAPGVQTPGMPYQECTFCFKPITKKDSKKKHDILHGTSGVISCRFCHLKFRTLDAFNIHAFSHRSRKYNKRPIKCRVCNERFVKYGPFMRHMKSVHKTTKKVHYRALVRPARCVICGDTFPNLHNHYRAHLTNQCQGCSKYFTSSKLFAEHECDKIDKDHTKVFTSDENLNALIDSYVPEELADDEKFYGYTDDDEEVETNLPEAMTRPRDEEVKKAMNGPHSLGPPRPQQDTEEAEYERNLHMMVQSPIISDVLSLFENATEGTQDNKDQTFLGEIVNLTDEDSMDVHDVAPPTVLVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-