Cleg011591.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- -
- Assembly
- GCA_947359385.1
- Location
- OX375769.1:2045869-2050170[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0071 0.4 11.3 1.0 3 23 58 79 57 79 0.96 2 24 3 1.7e+02 3.0 1.0 3 21 439 457 437 458 0.87 3 24 0.026 1.5 9.5 0.6 1 21 466 486 466 487 0.96 4 24 4.2 2.4e+02 2.5 0.2 1 23 527 550 527 550 0.90 5 24 0.011 0.63 10.7 1.5 3 21 561 579 561 579 0.97 6 24 0.14 7.7 7.2 0.6 2 23 588 610 587 610 0.93 7 24 0.0041 0.23 12.0 0.5 3 23 631 652 630 652 0.93 8 24 0.00066 0.037 14.5 0.1 3 23 659 680 658 680 0.95 9 24 0.086 4.8 7.9 0.0 1 23 706 729 706 729 0.90 10 24 0.013 0.72 10.5 3.4 1 23 734 756 734 756 0.97 11 24 0.0059 0.33 11.5 0.2 1 23 762 785 762 785 0.95 12 24 0.0035 0.2 12.2 0.8 1 23 798 820 798 820 0.97 13 24 0.00042 0.024 15.1 2.0 1 23 873 896 873 896 0.97 14 24 0.00014 0.008 16.6 0.9 1 23 959 982 959 982 0.95 15 24 0.0014 0.078 13.5 1.5 2 23 1004 1026 1003 1026 0.95 16 24 0.014 0.76 10.4 0.1 2 23 1032 1054 1031 1054 0.94 17 24 0.035 2 9.1 0.2 1 21 1096 1116 1096 1117 0.94 18 24 0.00084 0.048 14.2 0.6 1 23 1127 1149 1127 1149 0.93 19 24 7.6e-05 0.0043 17.5 0.3 2 23 1237 1259 1237 1259 0.93 20 24 2.3e-07 1.3e-05 25.4 1.4 3 23 1266 1286 1265 1286 0.98 21 24 0.0096 0.54 10.9 1.1 1 23 1305 1327 1305 1328 0.95 22 24 0.17 9.7 6.9 0.0 1 23 1351 1373 1351 1373 0.97 23 24 0.02 1.1 9.9 0.6 1 23 1379 1402 1379 1402 0.95 24 24 0.00025 0.014 15.8 0.4 1 23 1410 1433 1410 1433 0.96
Sequence Information
- Coding Sequence
- ATGGAGAGTGAGAAAGACGATGAAGATGACTATGAAGAAGAGATGAATATGGATAAACCAAGTCGTTCGGTGAAAGTTCCACATATGCCTGAGGTGTCCATCACAGTGATGCGCCCAACTGGCGAGACTCTGCAGTCACGCCAAGGTATTCAGCAAATCGCCTCCAAAGATTGTCTCATCTGCGGCCGCAACTACCGTTACTCACACAACGCTCGCAGACATGAGCTTACAGCACACAAATTCGACCGGTACGTTAACAAAGTAACCAGCAAAAAGTCACACTCTCACATGCAACCTAAACTCAGACCCAACCCATTCAACCCTAAAGCGCGTCTCATGCCGAATCCAATCAGCCACAAAATGCAGTTAATACCCAAAATCATGCCGAAAATTACTCCACAAAAAATCATATGCCCTCTAAAGCCTATACCAATAAAATCATCAAAGACGCCCCAAAATAATTTGCCGTATCCATTGCGAATCAAAGCTCTCAAAGATTTGCAAATAAAGAAAAAGGAACCTCAGATATTGAAAACATTACTCACATCAAAACCTGAAGTTTTGGTGTCCGAACCTGAGATAATGAACTCGGGGCCCGAAAGCCCTGAAACTCTTATATCTGAACCTGAAATTGCGTCGTTCCAAGTTGAGACGATACTTTCGGAGCCCAATGATTACAATGAACATCAAGAGGAAGAAGATACAGAAATTCCCAACAATCAGAGTCAAAACTACGACACCGTTGAAATGAACTCTGAAAATGAAATAGAAATCGCAAGGGAACGAGAGACTGCTAATGACGTTGAAGAAAATCATGACTACGATGACAGTTTACAGCATGATGAGGAAAATAACTTTGATGAAGCAGATGCAGTGGAACAAAATGCTAATGAGAAAAATCTTGATCAAGAAGCACCAACTGCCGATGGCGATGATAGCCAGGATAACTTGGAGATTGATGAAAATTACGAATCTAAAGATAAGGAAAGTAATAATGAAGATGAAGACGCAAATGAAGAAGAGCCAAATGAAGAACAGGAAAATAATCAAGGGGCCGAAGGTAATGAAGATGGAGAAGACCTTCCACCTGCACTGGTGCCAGAAGTAGAGTTAAGTGAAGAACAAAATAACTCATACAACAGTGAGATGAATAACGAGGTAGACGTCGAAGATAGTACTGTAATGAGCGAGCTCAACGATACTGCCGACAGTGAAACCAACGAAATAGATCCTAGTAAAACATACGTCACTAATGCTCAAAAAGAATTTATCAAAAGATATCGCGATATTATTGCTCAGGTAAATACCATGCGATGCCTGTGCTGCGATAAGGAATATCCTCGCAGAAAATCTGTCATACAACATTTGCAGAAAAATGGTTATAAAGTTCCAAAACACACCTGCTACAACTGTGTCATTACATTTAGCCATATCGGCGCTCTGCTCAGTCATATGAGACAAAACGCTTGTACTGACCTGTGGAAAATTATTTACGACGAGAATGGCATTACGGCTGATATGGTCCTTGAGGAACCAAAAAGCAAAATACAAGCCAAAGATATTTTCAATGCAAAATCGTATGCATGTAGGTTGTGCCCCGCTAAATTCCAATTGAAACAATCAATAATGAAACATGTGTCTGAACTACACGAGGATGGCCAGTCCGCGGTACCGCTCGGCTGTGTCCACTGTCAAGCAAATTTCAAAGACAGAACAACGCTCAAGAAGCATATCCGCTGCGGTGAGTGTACAGTTTACATACATTGCGATTTGTGCTCGGAACAATTTTCCAACATGACAGACTTCAACGATCACGCGTTGTCCGCCCACGCCGATCATTTTGTCAAAACTGAGAATCAGAGCAAGGGTGTGGATGGATTGGTCAACGACTGCTATATTTGTGGCACCAAAACTAGTAGCTATTCTAATCTACTAAAACACTTCAAAGCAGTGCACGAGGCGAGACCGCGCAACTGTCAATTCTGTGGCGTAAAGTTCGAGCAACCGGCCGATTTAAACAAACACATCTATGTAGAGCATCCCAACCAATATCCAGAAATGCAGTCTACGGAACCAGACATGGCCCTCGTAAAAGAAGAAGCCGAAGAGTATCACTACTCGTGCACGGAATGTAATGCCATTTTCGAAACAGTTGACGCGTGGACTGATCATCAAGTGGCTGAACATAACCAAGTCGCGCATCACTGCGACCAATGTGAAAAGAAGTTCTTGCGGCCCTCGGAGCTCGCTGAACACAAGAACACTCATCTGAGAGTCAAGTTCTACCCTTGCAGCATTTGCTCCAATTCCTACAGCACACCACAAAAGTTATCTGAACATGTACAAAACGTTCACCCGGGTGCAGGCTCTCAGGTCAATGCGGAAACTGAATTTTTCTGCGATATTTGCATCCGCCCCTTCAAGAGTCGTCAGGCCTACTCTAATCATATGCGCATACATTCTAAAGTGCCGACTACTAACAGAAAGCCGGGTGAGCCTAAAGGATTCGATCCACGCATCATCGGCAAACCCATTAAGCAATTCACCATGTCTAATGTGGTGTCGCCTGGCTTCATTAATTTCAAGCCAAATACTTCAAACGTTCCTAATGCTCCGTATTCGTGTGACCTATGCGGCAAAGGCTTCATGCACAAGAAAAATATTTGGAAACACAAGAAAGTTTTGCATGCCGATATAATTAATGACAGAAACGACAGCGAAGAGAACACGATGCATGCCTCGACCGAAGAGGATGAATATAATGTTGATGAAAACGGCGCTGTGCTTTCGACCCCACAGTTTAACAGTTTTAATTTCACAAATTTCACTAATAATGCTGCAATGCAGGCTCAGATCCAGGCTCAGCTCGAGCCTTTTGCATGCGAATTGTGCAATAAAAGATTCCCTCTGAAAAGTAGTTTGTGGAAACACAAACGTGCTAAACATGGAGTCATAAACACGAGTGGTGAGAATTCTGGATCAAATGAAGTCCAAAGTAGCGGCAGATCAAGCTGTACGATTTGCAAGATTACATTTGCTGACAAGAAATCTTATTATCGGCACAGAAAGAACGTTCACAAAACAGCAACGCAAATGTGCAAAATATGCGGCAAACCTCTCAACTCTACCCAGGAACTGTACGAGCATCTGAAAGCGGCTCACGCGAGAGAGTTGCTCGGTTACAATGCTAATCAGAGTACGAGCAAGGCACAAGATACCTCACAGGACATGGATAGCGAATACGATAACGAAATAGCCGATCCCAGCGTCGATTATCAAGCTCGGTATCCTTGCGACGCCTGCGGCAAACAGTTCGTCGGACTTCTCTCATTGCAAAATCACCAATGTATAAGTCAAGTGCCATCCCAGCCTCAGACGTTTGACTGTGAAATTTGCCACAAAAGCTACACTTCTATCGCCGCTCTGAAGAGCCACCGCGGTTGGCATCTCCGTTCGCCGGACGGGAAAGCGGCGGCCAACAATAGCGGTCTCTGGATGCCCCAACACAAAGTCACCAGCAAAGTCAGCAAGCACGAGGTCGTGGAACCGGTCACGCCGGCTGTAGTCACTCGTCGACACTCGAATCCGGCGGCCGCGGCCAAAAGGAGGTTACCCCCCGAAGTGGAAGTGACCGTCGTGAATCCAAACAAAAAGATGCGCTCAGACGATTCCGTCGAATTGGAACAAAACGAAGCCGTAGAAGGGAGGTACTGCACTATATGCGACAAGGAGTTCACTAAGCGCGCGGCGTACCAACGCCATATGGACGAGGTCCACCAACCGAACTCCGTGTTTTGCCCGGTCTGCGATAAGAGTTTCACGAGGAAATCGACTCTGCTAGTGCACATGAAGAAGCATTACGAAGGCGGCGGCGAAGGCAGCTCTACGGCACAGATAGACGAAGACGAAGCGCATTCGTGTGAGCTGTGCGGCGCGCAGTACGATACGGAGAACGCTCTGAGAGCACATCGGATCAGACACCACGGGGAGGAGTCTGGGGACGAGGAGTCCGAGGACGACGGGAACGTGCCCGTCGCCCAGCCGGGCGAGTTCACGTGCGGCCAGTGCGGGGACGGCGTGGCGACCGCGCGCGATCTCATCACACATCGCGCGATGCACTCCACACCAACCAAGTTCTTCTGTAACATTTGCAAAGTATACTTTGTGAGGGCGTTGGATCTGTCGTCGCACACCCGCGCGCGACACGCGGACAATGAGAAAGTATTCTTCCCATGTGCCATGTGTGACCGCTTCTACATGAATAAGAAGAGTTTGCAACGTCACATAGACATGGCCCACTGA
- Protein Sequence
- MESEKDDEDDYEEEMNMDKPSRSVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRNYRYSHNARRHELTAHKFDRYVNKVTSKKSHSHMQPKLRPNPFNPKARLMPNPISHKMQLIPKIMPKITPQKIICPLKPIPIKSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYNEHQEEEDTEIPNNQSQNYDTVEMNSENEIEIARERETANDVEENHDYDDSLQHDEENNFDEADAVEQNANEKNLDQEAPTADGDDSQDNLEIDENYESKDKESNNEDEDANEEEPNEEQENNQGAEGNEDGEDLPPALVPEVELSEEQNNSYNSEMNNEVDVEDSTVMSELNDTADSETNEIDPSKTYVTNAQKEFIKRYRDIIAQVNTMRCLCCDKEYPRRKSVIQHLQKNGYKVPKHTCYNCVITFSHIGALLSHMRQNACTDLWKIIYDENGITADMVLEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSELHEDGQSAVPLGCVHCQANFKDRTTLKKHIRCGECTVYIHCDLCSEQFSNMTDFNDHALSAHADHFVKTENQSKGVDGLVNDCYICGTKTSSYSNLLKHFKAVHEARPRNCQFCGVKFEQPADLNKHIYVEHPNQYPEMQSTEPDMALVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQNVHPGAGSQVNAETEFFCDICIRPFKSRQAYSNHMRIHSKVPTTNRKPGEPKGFDPRIIGKPIKQFTMSNVVSPGFINFKPNTSNVPNAPYSCDLCGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGAVLSTPQFNSFNFTNFTNNAAMQAQIQAQLEPFACELCNKRFPLKSSLWKHKRAKHGVINTSGENSGSNEVQSSGRSSCTICKITFADKKSYYRHRKNVHKTATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKAQDTSQDMDSEYDNEIADPSVDYQARYPCDACGKQFVGLLSLQNHQCISQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEPVTPAVVTRRHSNPAAAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQNEAVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSTAQIDEDEAHSCELCGAQYDTENALRAHRIRHHGEESGDEESEDDGNVPVAQPGEFTCGQCGDGVATARDLITHRAMHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -