Cleg015991.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- -
- Assembly
- GCA_947359385.1
- Location
- OX375777.1:3913591-3917645[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-05 0.051 13.3 0.0 5 40 3 38 2 43 0.87 2 2 2e-07 0.0002 21.1 0.0 5 38 364 397 361 403 0.90
Sequence Information
- Coding Sequence
- ATGAGACTACTACGCGCTTTGGAGGAAGTTAAAGCTGGCGGGTCAATACGTGGCACTGCTCGAAAGTATAGAATTAGCGCGTCAACGTTATGTTTAAGACGAAACAAACCAAATAGACCATACAAACCAGGACCCGCGCCTTTTCTCTCCGACGAAGAAGAAGGTTGTCTTAAAGAATGGATTCTGGACTTAATAAGACGAGAGTTTCCTGTGAAGAGCGAAGATTTACAAACAAGCGTTCAAAAAATTCTCACTGAAAACCCAAGACCGACATCGTTCAAAGACAACTGTCCTGGACGCAAGTGGATTCTTAAGTTTTTAAGACGACATCCCGACATTGGTAAAGTGATTCCGGATCCCCCGTCAGATTTCCTCTATGCTGGTGCCGATATTTCAGAATCAGACATTCGCAACTGGTTCTCTGAAATCTACCAATTCTTAGCCGAGAACGATTTGTTAGATGCGTTGGCTGATCGAAACCGTATTTATATTGGTGACGAGGGCAAGTTCCGGTTTTGTTCAGAAACAGGAAAAGTTATAGCAATGAAGGACGTGAAATACGTAAATTATGTAGAAACAGCATCTTGGGCAGCTGGGGGTCAGACTATGCTTCGGCTTTGTCCTAAAACAGGAAGAGTTAAGAAGGGCACAAAATATGCTGATGGCAAAAGATTCATAAAAGATCCGACGGCTGTTATGTTTACATTTTCAGCTTCCGGGGAGTTTTGCTCACCGATGCTCGTATATTCAAACCATGATGAAATTGAAAACAACGTGCCCCCCGGTTGGAGTACGGGCAGAAGTGATAACGGATTCATGACTGCAGATCTATTTCTTGAATACATAGCTCAAATATTCCATCCTTACCTGGTATCGGAAAATGTGAAACTACCCGTTTTATATTTCGTCGACGGCTACAAAACTCATTTATCGTATGAGGTCAGCAAATTGTGCAAGGAACTACAAATTGAACTGGTGGCACTGTATCCGAATGCTCATCGCATATTCAAACCATCCGAGACTGTGGTATCCTTTCGCCCGGATAGAGCAACCTGCGATGAAATTATAACAGAAGGGCACGAAATTAAACTACTACTTGCTTTAAAAGACGTCAAAGCTGGTGGGTCAATACGCGGCGCTGCTCGCAAGTACGGAGTTTGCGCGTCTACCTTATGTTTAAGACGAAAAAAACCCAATAGACCATTCAAACCGGGACCCGCACCTTTTCTTAGCGAGGAAGAAGAAATGTGTCTTAAAGAATGGATCGTCGAGTTGATGAAAAGAGGATTTCCACTTAAAAACGAAGATTTACAAGCAAGTGTACAAAAAATTCTCACAGATCACCCAAGACCGACGACGCTCAAAGACAACTGCCCTGGACGCAAGTGGATTCTGAAGTTTCTAAGACGTCATCCCGACATTGGCAAAGTGTCGCCTGATCCTCCGTCGGGGTTTCTTTATGCCGGCGCTCACATCACAGAACCAGACATTCGTAAATGGTTCTCTGATACCTACCAATACTTAGATGACAATAATCTGCTAGATGCGTTAGTAAACCCAAATCGTGTTTATATTGCTGACGAGGGCAAGTTTCGTTTCTGTCCGGAGACGGGAAGAGTAATCGCTTTGAAGGACGTGAAATATGTTAATTATGTAGAAACAACATCTTGGGCAACCGGAGGTCAGACTACGCTTCGGCTTTGTCCAAAAACAGGACGGGCCAAGAAAGGCACTAAATATGCTGATGGCAAGAGACCAATAAAAGAGTCGACGGCTGTTATGTTTACATTTTCAGCTTCCGGAGATAGTTGCTCACCGATGCTCGTATATTCAAATCAAGAAGAAATGGAAATTGACGTACCCCCTTGTTGGAGTACGGGCAGAAGTGATGTCGGATTCATGACTGCAGATCTGTTTCTTGAATACATAGCTCAAATCTTCCACCCTTACCTGGTATCAAATAATGTGAAACTACCCGTTTTATATTTTGTTGACGGTTACAAAACTCATTTATCATACGAAGTGACCAAATTGTGCAAGGACTTGCAAATTGAACTGGTGGCACTGTATCCGAATGCTCATCGCATATTCAAACCAGCCGAGGCTGTGGTATCGTTTCGTCCGAGTAAAGAAGCATGCGATGAAATTCTAAAAGACGGGCATAGTAACACAAAGTCACAGATTGTTGAAATCATTAATGTGGCATTTCAAAACTGTATTGAAACTCCGAGAATTGTCAAAGGATTTGAAGCGTGTGGTCTGATGCCATTTGATCCTAATGTTGTGCGTTATGACAAATGTACCAATCAACCCATTAAAAAGAAAAAAACGCCTTTATCAATTTAA
- Protein Sequence
- MRLLRALEEVKAGGSIRGTARKYRISASTLCLRRNKPNRPYKPGPAPFLSDEEEGCLKEWILDLIRREFPVKSEDLQTSVQKILTENPRPTSFKDNCPGRKWILKFLRRHPDIGKVIPDPPSDFLYAGADISESDIRNWFSEIYQFLAENDLLDALADRNRIYIGDEGKFRFCSETGKVIAMKDVKYVNYVETASWAAGGQTMLRLCPKTGRVKKGTKYADGKRFIKDPTAVMFTFSASGEFCSPMLVYSNHDEIENNVPPGWSTGRSDNGFMTADLFLEYIAQIFHPYLVSENVKLPVLYFVDGYKTHLSYEVSKLCKELQIELVALYPNAHRIFKPSETVVSFRPDRATCDEIITEGHEIKLLLALKDVKAGGSIRGAARKYGVCASTLCLRRKKPNRPFKPGPAPFLSEEEEMCLKEWIVELMKRGFPLKNEDLQASVQKILTDHPRPTTLKDNCPGRKWILKFLRRHPDIGKVSPDPPSGFLYAGAHITEPDIRKWFSDTYQYLDDNNLLDALVNPNRVYIADEGKFRFCPETGRVIALKDVKYVNYVETTSWATGGQTTLRLCPKTGRAKKGTKYADGKRPIKESTAVMFTFSASGDSCSPMLVYSNQEEMEIDVPPCWSTGRSDVGFMTADLFLEYIAQIFHPYLVSNNVKLPVLYFVDGYKTHLSYEVTKLCKDLQIELVALYPNAHRIFKPAEAVVSFRPSKEACDEILKDGHSNTKSQIVEIINVAFQNCIETPRIVKGFEACGLMPFDPNVVRYDKCTNQPIKKKKTPLSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -