Cleg007921.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- bab1
- Assembly
- GCA_947359385.1
- Location
- OX375768.1:2734989-2736945[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-13 2.3e-10 40.0 0.0 4 45 356 397 353 397 0.93
Sequence Information
- Coding Sequence
- ATGTATCCCGGCACTACGTTCGGTGAAATTCTACCAGAAGCCCAATTCAGAAAAATGGGGAGTAACGAAGGTCAGCAGACTTTCTGCCTGAAGTGGAACCACCACAAGACGAACTTGGTGGAGATCCTGGAGGCGCTCATCAAAGTGGAGACATACGTCGACTGCACCCTGGTGGTGGACGATCAGGTGACGTTCAAGGCGCACCGGGTGGTGCTCGCTGCCAACTCCCCGTACTTCCAGTCGATCCTGGCGGACGTGCCCATGGACCACTGCAGCATCCTATTCCCGGGGGTGAAGGAGTTCGAGATGCGCGCCCTGCTCGAGTACATGTACACGGGCGAGGTGAACGTCACGCAGGCGCACATCCCGCGCATCATGAAGGTGGCCGAGCAACTCGAGGTGAAGGGACTGTTCGACATGACGGAGCTGCGCCGGCGGCCCGGCAGCGGCGGCGCGGACCGCGCGCCCGGCGCCTCCCCGCCGCGCGTGGTGCCCGCCGCGCCCTCCAGCGCCTCCCCGCCCGCGCCCGCGCCCGCGCCGCCCGCGCGCTGGCCGCCGCTGCCGCCCGCCACCGCCACGCCCGCGCTCTCCGCCGCCTACGACTCCGCCGACATGAACCCGCTCAAGCGTAAGAAACTCTCCAGTATGCTCGCCACCCGCGACACCCCCATCCTCAGGAACGTCCTCGCTCAGACCTCCCCCGTCGACTCTTCCCAGCCCATGTCTCTAGTCTGCCACCCGGTCAGCCAGCCCGCCCCGCCTCGCCTCCACTCCAACGGTTCCGCTCACGATATGGAACGCCCGATGAGCCCCCAGCGCCCCTTCGATTACCGCCCCCGCCGGATGTCCTCCCGGGCTTCCTCCCCGCATTTCAATAGGTCGGACCGCTCCGAGGACGCCCACTCCCCCTACACGGAGCGCTCCTTCGACGACGAAAGTCAACGCACCTTCCACCCCTCTCCGCCCCCTACCAACTTCCAACAGGACGTGCGAGCCGGCTTGGCGCCGTACGTCCCTCCGCAGCAGAAGCCCGAGTGGAAGCGCTACAAGCAGTACACGAGATCCGACATCTTGTCGGCAATCGAATGCGTGAGAAACGGTATGAGTGCCCTGCAAGCGTCGCGCAAATACGGTGTCCCTTCACGAACTCTTTACGACAAGGTGAAGAAGCTCGGCATAACGACCAGTCGCCCGATGAGCCGCGGCGTCAAGAGGGAAAGCAACGGGGCTGCGTTCCCTTACGGGTTGAGCGGAACCGGGGGCGTCGAAGACGGTAATCACAATCCGGCCAGCGCTCCCCTGATAGATCCGTCGTTCCTCCAGCAAGCGTTAGAGGGGGCGACCAGAGACGGCGGTCGCGAGGCCCTCCACGCCATGGCGTTGGCGGCGGCCGCACACGCCGCTCTCGCTCCGCGCTCCCCGCCCCCTCACCACCGCACGCCGCCGCAGTCTCCCAGGTCCCCCCTCCACGACGAGGACCACGTCGAGGACCTGTCCGTGCCGCGACGCCGCGACCTGGAACCGCCGGCCGGCGTCATCGTGCCCCCTCGCAACTTCGCCCTCGACTGCGGGAGCGAACGAGATTGA
- Protein Sequence
- MYPGTTFGEILPEAQFRKMGSNEGQQTFCLKWNHHKTNLVEILEALIKVETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKEFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMTELRRRPGSGGADRAPGASPPRVVPAAPSSASPPAPAPAPPARWPPLPPATATPALSAAYDSADMNPLKRKKLSSMLATRDTPILRNVLAQTSPVDSSQPMSLVCHPVSQPAPPRLHSNGSAHDMERPMSPQRPFDYRPRRMSSRASSPHFNRSDRSEDAHSPYTERSFDDESQRTFHPSPPPTNFQQDVRAGLAPYVPPQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKRESNGAAFPYGLSGTGGVEDGNHNPASAPLIDPSFLQQALEGATRDGGREALHAMALAAAAHAALAPRSPPPHHRTPPQSPRSPLHDEDHVEDLSVPRRRDLEPPAGVIVPPRNFALDCGSERD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025187;
- 90% Identity
- iTF_00661466;
- 80% Identity
- iTF_00318219;