Basic Information

Gene Symbol
ct
Assembly
GCA_947359385.1
Location
OX375785.1:8035307-8041315[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.5e-32 2.6e-28 97.9 0.0 4 77 362 436 360 438 0.96
2 2 7.9e-31 3.6e-27 94.2 0.0 3 75 565 638 563 642 0.95

Sequence Information

Coding Sequence
ATGAGATCAATAAATATTGTTTTGACAATTTACGGCGGCCATGTCGATGTGTTGACATACAAGATGGCGGCTTGCGTCCGCGCAAGTGGAAATAACCTGAGTTTCGACAATTTCGAGGCACGTCTCGTTGGCTCCAAAGATGGCAGCATCGGACCGGGATTCGGAAGGTCTGATGGTGAAGGTGACGATCGACTGGCACATATCCTCAATGAGGCTTCCCATATGATGAAGACACCCACTGGACCTCAGCACAACGACGATTCTAGGAGCAATGAAGATTCCAGCTCACCTAGAACACAGTGTCAATCACCTTTCTCTAAGGATGGAAGTCAAAACAGAAGATTGAAGAAGTACGAGAATGACGACATTCCTCAGGAGAAGGTAGTTCGCATATACCAAGAAGAACTGGCCAAGATCATGAGCAGACGAGTGGAAGATATCCGTCACAACCGCGAAGGTTTCCCTGGTATGTTTCCCCCTTTTTTCAGCGGTGGTATGCCCCCACACATGGAGAGGCCGCCCGAAGACATCCGTATGGCTTTGGAAGCATACCACAGAGAGCTGGCCAAAATCCAACCTGGTGGCAACATTCCCAACCTCCACAACATGCCTGGAATGCCCCCTTTCCCCAACCTCCTCGCTCTTCAACAGCAAGCGATGCAACAAGCCCAGAACCAGCATATAAACGGCTCTGGCGCTGTCCAAGATCTCTCTCTTCCAAAGGACAAAAACGCCAAAATTAATGGAATGACTGATAGTGATAAGGATAGGTCGATGGATGCCGAAGAGGCTATAAGGCACGCGGGGAGCGCTTTCTCACTCGTGCGGCCGAAACTGGAGCCCGGCCAGCAGTCTACCGGCTCGTCCGCCTCCAGCCCTCTAGGTAACGCCATACTGCCCCCCGCGATAACCCCCAATGAAGACTTCAACAGTTCAGCCGCTGCGAGTCCGCTGCAACGAATGGCCTCCATCACGAATAGTCTGATATCGCAACCGAGCAACCCGCCACACCACCCTCCGGCGCAGAGATCCATGAAAGCGGTACTTCCCCCCATAACGCAACAACAGTTCGATCTATTCAACAACTTGAATACGGAAGACATCGTCCGAAGGGTCAAGGAAGCACTGAGCCAGTATTCTATCAGTCAGCGACTTTTTGGGGAGTCCGTCCTGGGGCTCTCGCAGGGGTCGGTGAGTGACCTTCTGGCGAGGCCGAAACCTTGGCACATGCTGACCCAGAAAGGACGGGAGCCCTTCATCAGAATGAAAATGTTCTTGGAAGATGACAACGCAGTCCACAAGCTAGTAGCTTCACAATACAAAATCGCACCAGAGAAGTTGATGAGGACCGGGAACTATAGCGGAGCACCTATATGTCCGCCAAACATGTCCAAACCGATGCCGCCAACGCAGAAGATGATCTCAGACGCCACGTCGCTCCTGAGCAAGATGCAGCAGGAGCAGCTGTTGGGCCCCGGCCACCTGGCGCACCTCGGGCAGCCTCCTCCGCTGCTGCTGACGCCGCCCGGCTTCCCCCCGCACCACGCCGTGACGCTCCCCCCGCAGCACCACGACAACAGTAACAAGGAGAGGAAACCCCCTCCGCCTCCCCAACCGCACCACCAGCCCCCCATCATGCGCAGTCTGCATCAACACATATCCCCCAGCGTCTACGAAATGGCCGCTTTAACCCAAGACCTCGACACGCAAACTATCACGACCAAAATCAAAGAAGCGCTGCTCGCGAACAACATAGGTCAGAAAATCTTCGGCGAAGCCGTTCTCGGCCTCTCCCAAGGATCCGTCAGCGAGCTGCTGTCCAAACCCAAACCCTGGCACATGCTCAGCATCAAAGGGAGAGAACCCTTCATACGAATGCAGCTGTGGCTCAGCGACGCGCACAACATCGACCGCCTGCAAGCGTTGAAGAACGAGAGACGGGAGGCCAACAAGCGACGTCGATCCAGCGGACCCGGGCAGGACAACTCTTCCGACACCTCGTCTAACGACACGTCCGAGTTCTATCACTCGAGCTCCCCGGGACCGACCTCCGGGGCGCCGTGCGCCAAAAAGCAACGAGTGCTGTTCTCCGAGGAACAGAAGGAGGCTCTAAGACTGGCGTTCGCTCTCGACCCGTACCCCAACATGCCCACGATAGAGTTCTTGGCGGCGGAACTGGGGTTGTCGACGCGGACGATAACCAACTGGTTCCACAACCACAGAATGCGATTAAAGCAGCAGGCGCCGCACGGGCTGCCGGCCGAGCCGCCCGCGCGGGACCAGTCCTCGGCGCCCTTCGACCCGGTGCAGTTCCGCCTGCTCCTCAACCAGAGGTTGCTCGAGTTGCAGAAGGAGAGGATGGGCCTCGCGGGGGTGCCCCTCCCCTATCCCCCGTACTTCGCGGCGAACTCGAACCTAGCCGCCCTCATCGGCCGGGGCCTGATCCCGCCCGAAGAGGTGGCCAAAGACCAGAGCGGCGGGCTGGACCTGTCGATGCCGCTGAAGCGGGAGCCCGACGGCGACGACTTCGAGGACGACGACGTGGACAGCAACCTCGGTTCCGAGGATTCGCTGGACGACGAGTCAAAGACTGAGCCCAAGGCGGCGTCCACGCCGCAGGGGCGTTCGAGCAGACGGAAGCCCGCCGCGCCGCAGTGGGTCAACCCCGACTGGCAGGAGGACAAGCCTCGCAACCCCGACGAGGTCATCATCAACGGGGTGTGTGTCATGCGGAGTGACGACTTCCGCCGCGAGGCCGAGGAGACGGTCCGCGTCGAGCCCTCGCCCGTGCCGCGCGACACCTCCCCCTCACCCTCCCCCTGCCGCTCCCCCTCCCCCTCCCCCGCCCCGTGCCCCGCGTCGCGCCCGCCGCGTCCGCCGCGCACGCCGCACACGCCGCACGCGCCGCGCCCGCCGCACACGCCGGATGACGTCATCCCCGAAGACAAGATCAAGTCTGAAACGGAAGACGACCGGTGGGAGTACTAG
Protein Sequence
MRSINIVLTIYGGHVDVLTYKMAACVRASGNNLSFDNFEARLVGSKDGSIGPGFGRSDGEGDDRLAHILNEASHMMKTPTGPQHNDDSRSNEDSSSPRTQCQSPFSKDGSQNRRLKKYENDDIPQEKVVRIYQEELAKIMSRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNMPGMPPFPNLLALQQQAMQQAQNQHINGSGAVQDLSLPKDKNAKINGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFNSSAAASPLQRMASITNSLISQPSNPPHHPPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPNMSKPMPPTQKMISDATSLLSKMQQEQLLGPGHLAHLGQPPPLLLTPPGFPPHHAVTLPPQHHDNSNKERKPPPPPQPHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEEVAKDQSGGLDLSMPLKREPDGDDFEDDDVDSNLGSEDSLDDESKTEPKAASTPQGRSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPRDTSPSPSPCRSPSPSPAPCPASRPPRPPRTPHTPHAPRPPHTPDDVIPEDKIKSETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01401167;
90% Identity
iTF_01335819;
80% Identity
iTF_00318003;