Basic Information

Gene Symbol
XBP1
Assembly
GCA_947359385.1
Location
OX375769.1:3893849-3897382[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.6 7.1e+03 -2.8 0.1 18 25 29 36 28 37 0.75
2 2 2.9e-18 2.1e-15 56.5 9.9 2 63 41 102 41 104 0.95

Sequence Information

Coding Sequence
ATGAGTGGTCCAATCATCATAACCGTTCCCAATAATTATCTGGTGGATGAGGAGACGAAGGTGGGTGTGGACGTGACCAGCTCTTCGTCTCGGAAGCGGCGGTTGGACCATTTATCATGGGAGGAGAAGATGCAAAGAAAGAAAATGAAGAACCGAGTCGCAGCGCAGACGTCGCGCGACCGCAAGAAAGCCAAGATGGACGAGATGGAGTCCCGAATAGATAGTCTGGAAGTGCGCAACGAGAAGCTGATGAGCGAGTTGGCGAGCCTGCGGGCGCTGAACGAGCGCCTTGTGAGCGAGAACATGTCGCTGCGCAGCACGGCGGCGGCGCGGAGCGTCGCGGAGGCCCCTGGACCGGCAGCGTCCCCTCAGCAGAAGGCGGGGCCTCCGCCGGCGGTCCGCGCGGCGCGCCTGCTGCTCGCGATGATGCTCCTCTCGCAGAGCTCCTCGCGCACCTCGACTCCCCGGAGTACCTCGACACGCTGCACCAGCTCGCAGACTCACTCCTCCACGAGATTGATGCAGGTGTTGCAGGAGCGACTCAACATGAGCAAATCGGGGAAGCTGGAGAATGTCCTAAAGGAGCTCAAATGGTGGGGCCCGCAGCAGAGCACGTGGAATCCAGTGGAAGTTCTGTCCTAG
Protein Sequence
MSGPIIITVPNNYLVDEETKVGVDVTSSSSRKRRLDHLSWEEKMQRKKMKNRVAAQTSRDRKKAKMDEMESRIDSLEVRNEKLMSELASLRALNERLVSENMSLRSTAAARSVAEAPGPAASPQQKAGPPPAVRAARLLLAMMLLSQSSSRTSTPRSTSTRCTSSQTHSSTRLMQVLQERLNMSKSGKLENVLKELKWWGPQQSTWNPVEVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01171208;
90% Identity
-
80% Identity
-