Cins000422.1
Basic Information
- Insect
- Chelonus insularis
- Gene Symbol
- Zfy2
- Assembly
- GCA_013357705.1
- Location
- NW:321091-341269[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4.4 3e+02 1.4 0.2 6 23 342 361 339 361 0.87 2 16 2.6 1.8e+02 2.1 2.2 2 23 425 445 424 445 0.95 3 16 0.71 48 3.9 3.9 1 23 477 501 477 501 0.92 4 16 0.0075 0.51 10.1 1.1 2 21 558 577 557 581 0.89 5 16 0.0087 0.59 9.9 1.0 2 23 596 618 595 618 0.97 6 16 0.058 4 7.3 0.7 1 23 631 655 631 655 0.93 7 16 0.008 0.54 10.0 1.8 2 23 674 696 673 696 0.94 8 16 0.018 1.2 9.0 2.8 1 21 701 721 701 722 0.95 9 16 3.5 2.4e+02 1.7 0.2 3 23 746 766 745 766 0.85 10 16 3.1e-06 0.00021 20.8 0.9 1 23 785 806 785 806 0.98 11 16 3e-05 0.0021 17.7 0.5 1 20 812 831 812 833 0.95 12 16 2.7e-06 0.00018 21.0 1.2 1 23 849 871 849 871 0.98 13 16 0.0044 0.3 10.9 0.1 1 23 876 901 876 901 0.94 14 16 4.4e-05 0.003 17.2 1.6 1 23 910 932 910 932 0.98 15 16 0.0098 0.66 9.8 3.1 2 23 943 966 942 966 0.93 16 16 0.00092 0.063 13.0 1.1 1 21 972 992 972 997 0.94
Sequence Information
- Coding Sequence
- ATGGAAACAAattatgaagatgatgatgatacaCATTATTGTATCAAATGTCATTTGACGATAAGTGGACTTGATAATTACGTTCAACATCGTCAAGTTCGATGTCGACCAACAGAATCAAAAAGTGTATCCTCTGAACCACCATCAACTGAAGTTTCTTATCCAGAGATTCTCAATGCTGATGCATTCTTCAGTTCATTAGAGCTTCAAAGTAGTTCGAAATCTAAGCAAAATGTAACAAGATTTCTTGAGCCAGAAAGAAAATCTGACAGGCTCTTAGGGAAGCGGAAAAGagctaaaaaatatcatgacaTTGAGGAATCAAACTCGAAAGAGAAATTAATATCACTGCCACCAGTTGTTACTGATCTTGATGATCCCACTGATCATATTGGCATTCCTTCACTTGTTGGCTTCCCTGATATTGTTACTTTTACAGAAAAATCATCAGCCACATCAACAAAGCTTCAGTCTACTACTGGTTCTAAACCtgttgataatgataaaaaacgaAATGAAGATCATCGAGTTTGGTTGGATGATCTTGAGGACTATGATGCTAATAAGGAAACTGTGTCAACTGCAGATAGTGATACTGAATTTGCTTATCAACCTGATGATGACTTAGATGTTGAAAGTCCAGTGGATGATATTGGTCAGGATGACTCTTATTCTGAGACTGATTACCCAGATGACCGAGAATACCCTCCTCAAGCTCATACTGGAGGTAAATGGAAACCTGGTCAACTCGTTCATCATATGACAGTATCTAATGATGATGAATTGGATCAAGATGATTATCACCATGAGAATTTAGTCCCTCCACATTCTGGAGGCAAATGGAAACCTACTgagCAGAAAGCTGAAGAAGATGAGTCAGTTGAGGCTGAAAAGGAAGACGAAGACAAAGAAAGTGCATTGATGAAAAGTAGCAGACGACCACCCCTTGGCCATACTCGTGGTAAATGGATTCCTGGAGCTTCAGTTACGTCGGAAGTTGAATTGGGTTATTGGTGTGCTCCTTGTGGCCGAAAGCTTGCGTCTAAATTGGTTTACACTAGACACTTGCGCTCAGACTTACATGCTCGACGGAGTATTCAAGAGATTGAGGGAGATGTTAAATTACCACGATCAGTTGGTCCACTCTTACGCAAGAAAGATCCCAGCAGACGTCAAAAAATTCTTGCTATTaaaaaggcAGAATCGAAGAAGATTATTGTGGATAATAATAGGTCAACAAAACGGAAAAGATGTCGAGAAAAGCAAATTCTTCGGTGTGAAATGTGTCACGCTCGTGTACATCGTCCTCAGTTGGGCAAGCACCTGCTTTCTCACTACCACTGTCGTGTTGCTGGATTAAATCCCTGTAGTACAGCCGCACGACGTTTTATCCTGGAAAACATGGGTAATGTTGTTCGCCAGTGCCCATTTCAGTGCACAAGCTGTCGCTTTTACTGTAATACTGAAGACACTTTTCTACGTCACTGGCGTTCCGATCTTCATATTAATTCATGTAATGAGgatgataaaaattacactTGTGTATGTTGTGATTATTGGTGTCAGGGTGACACCATAAtggaaaaacatttattaagtTTGGAACATCGAGAAACAGTGGCcatgattaataattcagtACCAATTATAATAAGAAGGCAGAGATTTTTATCATGTGAAACCTGTAATCGTCGTTTTCGGTATAATCTTCAACTTCGATTACATTCTAAAGAAACTGGTCATCCAGAAAGTTGGACAGCAAGTAATGAATATCAacgaataataaaatgtacttTATGTCCTCAAATTTTGCGATCGCTGCTTGCATTGCAGCGTCATCAGTTAACCTGTCATAAATTGTCAAACACTAAAGATGAAGTATCAGCTCCATACTTTTGCTCTTTCTGttcaattaactttaaaactGCTCAAGATGCTGTGCTTCATAGGAGGACAATAAGTCACAAACAGATTGTGAAAGAGTCCAAGTCTAAATCAGAAGTCATATCGGTTGTAAAAGAGTGTAAATATtgtcaacaaaaatttaacaatcTGTTGGAATATAAGCAACATTTACTTCAAAATCATCCAGACTTTTGTCACAAGTGTTTGAATTGTAAAAAGTACTTCGCTTTATCTCAAGATTTAACAAAACATACTAAATATGATAAATGTCAAGAAAATACTACAAAAATGAGTGAACTAGAACTTATTAGTACAGTTGACCAAAAAAATTGTCCTGAATGTTCATTCGTTACAAAGTCTGAAGCAgagtttctttttcatcaagCACTGCACGCCGGTAATGTGGAGTTTCCTTCAAAACAAACGAATTCTCGTAAAACTGCTATGTTTCGTTGTCCCGTGTGCAAAAAAATCTTCACGAAAACTTCTCTTCGTGCTCACATTAGAAGTCATACTGGTGAAAAACCTTACAGTTGTTCCAAATGTTCTGAgtctttttcaaaaaaatcttcattaaATCTTCATATCATCCAGTGCCAGTTATATGAGCTAAATGAGAAGAAAGTACGTGAACGAAAGTACATTTGTTTAGATTGCAACACAGCTTTTTATACAaaAAACAACTTACGACAGCATATGCTTCGACATACTGGTAAAGATTTCAAATGTAGTTTTTCGGGTTGCCCAACTGTTCTTCGAACTGAAGCTGAACTGAAAAATCATCAAGCTCTAATTCACTCTGAAAAAGATACTCATCGCAAGTTTCAATGCAACGAATGCTCTTATGCAGCTAAAACTAAAACACAACTCCGCAGGCATCAAATTCGTCATAAAAGTATTGGCAACGAAATTCAGCAACTGTCATGTTCCTACAAAGGCTGTTGGTTCACGACAAGATTTAGTTCCCACTTGAAACGACACGTTCGCTTACATACCGGCACTAAGCCATATAAATGTCCTCACTGTTCATATGCAAGCAACAATATAGAAAATTTGCGTAAGCACGTTTTATCAACGAAACTTCATCCTggaaaaacaatttatgaGTGTGATCAttgcaaaaagaaaaagaaggatACAGCAGCAGTTTATGtaacgaattttttaaaagaattgcGTGCTCATTTAATAGAAGAACATTCTGAGGAATTCCCAACGCTTGGTCATGCTAACAGTTATGTTGCTGGAATGTTTGGCAGTGATGGACAATCCACTCCGCACGAATGA
- Protein Sequence
- METNYEDDDDTHYCIKCHLTISGLDNYVQHRQVRCRPTESKSVSSEPPSTEVSYPEILNADAFFSSLELQSSSKSKQNVTRFLEPERKSDRLLGKRKRAKKYHDIEESNSKEKLISLPPVVTDLDDPTDHIGIPSLVGFPDIVTFTEKSSATSTKLQSTTGSKPVDNDKKRNEDHRVWLDDLEDYDANKETVSTADSDTEFAYQPDDDLDVESPVDDIGQDDSYSETDYPDDREYPPQAHTGGKWKPGQLVHHMTVSNDDELDQDDYHHENLVPPHSGGKWKPTEQKAEEDESVEAEKEDEDKESALMKSSRRPPLGHTRGKWIPGASVTSEVELGYWCAPCGRKLASKLVYTRHLRSDLHARRSIQEIEGDVKLPRSVGPLLRKKDPSRRQKILAIKKAESKKIIVDNNRSTKRKRCREKQILRCEMCHARVHRPQLGKHLLSHYHCRVAGLNPCSTAARRFILENMGNVVRQCPFQCTSCRFYCNTEDTFLRHWRSDLHINSCNEDDKNYTCVCCDYWCQGDTIMEKHLLSLEHRETVAMINNSVPIIIRRQRFLSCETCNRRFRYNLQLRLHSKETGHPESWTASNEYQRIIKCTLCPQILRSLLALQRHQLTCHKLSNTKDEVSAPYFCSFCSINFKTAQDAVLHRRTISHKQIVKESKSKSEVISVVKECKYCQQKFNNLLEYKQHLLQNHPDFCHKCLNCKKYFALSQDLTKHTKYDKCQENTTKMSELELISTVDQKNCPECSFVTKSEAEFLFHQALHAGNVEFPSKQTNSRKTAMFRCPVCKKIFTKTSLRAHIRSHTGEKPYSCSKCSESFSKKSSLNLHIIQCQLYELNEKKVRERKYICLDCNTAFYTKNNLRQHMLRHTGKDFKCSFSGCPTVLRTEAELKNHQALIHSEKDTHRKFQCNECSYAAKTKTQLRRHQIRHKSIGNEIQQLSCSYKGCWFTTRFSSHLKRHVRLHTGTKPYKCPHCSYASNNIENLRKHVLSTKLHPGKTIYECDHCKKKKKDTAAVYVTNFLKELRAHLIEEHSEEFPTLGHANSYVAGMFGSDGQSTPHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00317037;
- 90% Identity
- iTF_00317037;
- 80% Identity
- -