Cins000307.1
Basic Information
- Insect
- Chelonus insularis
- Gene Symbol
- ZNF236
- Assembly
- GCA_013357705.1
- Location
- NW:437590-451515[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 5.4e-05 0.0037 16.9 1.9 1 23 171 193 171 193 0.97 2 28 8.8e-05 0.006 16.2 0.6 1 23 199 221 199 221 0.98 3 28 1.9e-05 0.0013 18.3 0.3 2 23 227 248 227 248 0.97 4 28 0.005 0.34 10.7 0.2 3 23 256 276 254 276 0.96 5 28 7.8e-05 0.0053 16.4 1.0 2 23 287 308 286 308 0.97 6 28 1.4e-06 9.6e-05 21.9 0.9 1 23 329 351 329 351 0.99 7 28 6.4e-05 0.0043 16.7 1.4 1 20 357 376 357 379 0.93 8 28 1e-05 0.00068 19.2 1.5 1 23 385 408 385 408 0.97 9 28 0.0072 0.49 10.2 2.9 1 23 417 440 417 440 0.97 10 28 5.8e-07 3.9e-05 23.1 2.1 1 23 535 557 535 557 0.98 11 28 0.00024 0.016 14.9 1.6 1 23 563 585 563 585 0.99 12 28 0.0049 0.33 10.7 3.2 1 23 591 613 591 613 0.98 13 28 7.7e-06 0.00052 19.5 0.7 1 23 617 639 617 639 0.98 14 28 0.00023 0.016 14.9 3.6 1 23 695 717 695 717 0.98 15 28 1.3e-06 8.7e-05 22.0 1.4 1 23 723 745 723 745 0.99 16 28 7.3e-06 0.0005 19.6 1.4 1 23 751 773 751 773 0.98 17 28 0.00034 0.023 14.4 7.4 1 23 779 801 779 801 0.98 18 28 8.8e-05 0.006 16.2 0.5 2 23 1125 1146 1124 1146 0.95 19 28 1.8 1.2e+02 2.7 1.6 2 23 1172 1193 1171 1193 0.87 20 28 0.0001 0.007 16.0 3.5 1 23 1199 1221 1199 1221 0.98 21 28 0.00017 0.011 15.3 0.6 2 23 1230 1251 1229 1251 0.97 22 28 1.7e-08 1.1e-06 27.9 1.3 2 23 1325 1346 1324 1346 0.98 23 28 0.49 33 4.4 7.2 1 23 1352 1374 1352 1374 0.92 24 28 5.3e-05 0.0036 16.9 4.3 1 23 1380 1402 1380 1402 0.97 25 28 0.0012 0.081 12.7 3.7 1 23 1408 1430 1408 1430 0.99 26 28 0.00017 0.011 15.3 1.9 2 23 1646 1667 1645 1667 0.97 27 28 1.2e-05 0.00082 18.9 4.4 1 23 1673 1695 1673 1695 0.98 28 28 1.2e-07 8.1e-06 25.2 2.5 1 23 1701 1724 1701 1724 0.98
Sequence Information
- Coding Sequence
- ATGTTGACAAAACCAACATCAGATGTAGAGACCGTATCTCTCGCTATTGACACAATTCCAATTAGTTTTATCATCGCAGAAGATGGGCGGACACTTTTATTAGCAGagcAAGATGATGGAGCCTTAGAATGGATAACTACACCTATTGCTTTCATCCAGCCagataatacaattttatcttCAGTTAAAGTAGCAAACGAAAACCCATCTGCAATTTCAtccttattccaaataaatattgaaaatgttgTCCCTGCTAATAATACATCGGAAGCAACTATCCTCCAAGGCAAAAATACACCAATTATTTCTAACTTAACTGATGTAACgaattctaaattaattctacAACAATCTTCTGAGGGCTTAACAATAgtaaatactaataatatattacaaaGTGAAAACACTTCTGATCAACAATCAAGTTTCTTAGTAGATACAACGAAAATTAACAAAAGGAGTCCTGGAAGGCCTAGAAAAAATGCCGTTAATGCAACTGATaCGGATCATAAATGTGAAATTTGTGGTGAAGAGTTCAAGAAACAAATCCTTTACCGTAAGCATATGGAACAACATGCTGAAGAGAAACCTCATCGATGTCCAAAATGTCCAGCATCTTTCAATATACCTACAAATTTCACGCTTCATATGGCGACGCATAATACAGGAGAACCTAAATGTCCTGAGTGTGGTCGAAAATTCGCTCGTATGGCTAGTCTCAAGTCTCATTTATTACTTCATGAAAAGGAGGAACACCTTTTTTGTAAAGAGTGCGAGGACGTATTTCCTTCAAAGACGCAATTAGATGCACACTTGCGACTTCATAATGAAAAGTGGTCAACAGACGATGTGAAGAAGTGCAAATTATGCAGCAAACAATTCACTCAGCCTGCACTTTATCGTATTCACATTCGAGAACACTATAAATTACAGACCAAAATGATGAAACAGACAAAAAGAGGAGTGACACATAAAACGGTGTATAAATGTAAGATATGccttaaaatatttcaaaaaccTAGCCAATTGATGAGGCATATTCGGGTTCATACTGGAGAAAAACCATTTGTtTGTAACGTTTGCAACCGATCTTTTACGCAAAAAAATTCCcttcaaatacataaatgGAAACATGTAGGAATTCGTCCATATCATTGCAATCAGTGCAATGCAAAATTCAGCCAAAAAGGTAATTTAAACGCACACATTTCTCGGGTACATAATTTGCCAGAGGGCGAACCGGTATATTCGTGTATGCTGTGCACGTGTTCTTTTAAGAAAATAGGAAGCTTAAGTATTCATATGAAAAGGATGCACACCGTTCCGATAGAAGGAGAAGAAAAATGTGACAGTTCTATAAATGCTGCAGATTCAAACGTTCAAGATGCAACAGATTTTACAAATAAAGGTGATATATTACAAGAAGCTTTGAAGATAAGTGGTTTATccagtaaagaaaaaaatctctcttctgtagaACCGAATTCAAAAAACAATCAAGTACAAACATCTTATGTAACGCTTTTAGACAGAGCACCTGATGGTTCGTTAAggAAATACGTAACAATAAAACAACGGAATGCTGGAAGTACAAGATGGTATGCATGCTCCTACTGTCATAAAGAGTTTAAAAAACCATCAGATCTGCTTCGACATTTACGAATACATACACAAGAGAAGCCATATAagTGCTCTCAATGCTATCAATCTTTTGCACTAAAATCGACAATGAATGCTCATGAACGAACTCATTCcggagtaaaaaaatatgcttgCGGTATTTGTGCGAAGAAATTTGCTTGCCATAGTAGTCTCAAAGCTCACACAAGaaCTCACACAAAACCTTTTGTATGTACTATTTGTGAAAAATCTTTTGGAACAAACAGTGTTTTAAAAAGCCATCTAAAAAGTCATgtgaaatcaaaattaaagaTATCACCAGATGCAGAGGCTTTGATAccacaaattattttagaagAGCCATTAGTAATAAGTGATGcaggaaataaaattagtgTAGCTCATATAAAATCGAAACAGAATCATGTTCATGCAGATGGTGATAATACTAGTAGACCACATAAATGTTGGGTTTGTCCAGCAGCGTTTAGAAAAATAAGTCATTTGAAACAGCATTATCGTCGTCATACTGGTGAACGACCATTCAAATGTCCAAAATGTGAAAGGAAATTTACGTCTAACAGTGTTCTCAAAGCTCATCTACAGACTCATGAAGCAGCTAGACCGTATAACTGTACCGTTTGCAATGCTAAATTCTCAACACAGAGTAGTATGAAACGGCATTTAATCACTCATAGTAACAAAAGACCGTTCATGTGCCCATATTGTCATAAAACATTTAAGACCACCGTCAACTGCAGGAAACACATGAAAATTCACAAAACCGAGCTTGCGCAACAgCAACTAGAAAAACAACAAGCACAAGAAAAAGGATCTTTGTTAGAAATTCCAGATAAAGAACCAATTTCTGTTATACCAGAAAATATAAGTTTATCAGAAGATATTACAAATTCATTCCAGCAGAATATTAATTCTGATTTTACTCAAGCatttaatgatcaattttcatcaattagtAATAaggaaaaatcatttttagcgGAGACTAATACTACGCAGGcgatagaaaatttatcacaaacacataataataataataatactaataataatataggAATCTCTCAAACTTTGCATGCTGATGAAACCGGAACTATTACATTACCAAATTATTCTGGAGACCAAACTCTTACTGCTGAAAGTATACGAGAGATTGAAGAAACATTGAATCaacaactttttaatattggAGTAAATCTCGGTTtaggaaataatttatctcgACAAATTAGTGATTCAGATGTCGGAGCATTGGAATCACGAGAACAACCAGtactaaatataatttatgacaATTCTAAGTCACTTGACACAACTGGAGTTAATCCAatgaatacaaatatttttaattcgcAATTTGATACCTTTGATATGAGTCACATAACTCTTCAAACAGATTCTGAAATGGATATTGGAATAACACCTGCTAATTCAACAAGCATGGCTAGTATATTGCCCAAATCAGCTCAAGAAGAACAGCGGTTAGCGCCTGTATCTGCTTCCAATTCTCAAGACAATCAATCAAAAAAGAGCGAACCTCTGATCATGGCTAATAATAGTATGCAATCATTTAGAGATGTATCAAAATCAATTTCGTGTCCAAAATATCCGAAAATAATTGCGAAGGCTGATACTACTGATAAttctgaaattttaaatttcaatcaagAATCAAATGATTTGTCTGTTTCATCACCATCTTCCATTCTTGAACATCATTTACAATTACCATGTACATATTGTGATAAACTATTTTCAGATGAACATCAACTAAAATTACATATTGAAGCTCATCTCTCAGAAAGTATGAGAAGTAACGCGGAGGCTAATCAAAACTTATCAATCATTCTAAATAATGAAGCATCACTGCAATGCCATATGTGTTATAGTAAAGGATTTGatgttatttcattgaaagaaCACCTAAAAACTCATCGAGGAGAGAAAGAATTCCAATGCACACAGTGTTCTCAAAAATTTTGTACCAATGGAGGTTTAAGTCGACATTTAAAAGTTCATGCTGGAAAAACTATTGACATGTGGAGCTGTACAATCTGTTATGAAACATTTTcgaatgaaaatcaattaatattacataaaaagaCCCACAATCCTCTCGGATGGAATAGTCCTCATACAGAGCCTGATAGTTCGCAGAAAGAACCAATTGCTACGGAGACTGAATTGTTAAATATGAATACCATTAAGCAGGAATTGAACTCTTCagtttcagaaaaattactatttgaTGCTGTAGTTGAGagagattatttaaaaataaagaataatgatTCAACAGTTCAACAAGAAAAGAGagaatttgttaataaatgtgAATACTGTCCTAAAACATTTAGAAAACCAAGTGATTTAACTCGTCATATTCGAACGCATACTGGTGAACGTCCATATCAGTGTGAACATTGTGAAAAAAGTTTTGCAGTTAAATGTACCCTTGACTGTCATAAAAAAGTGCATACTGGTAATCAAAAATTCTGTTGTCACGTGTGCAATAGGCTTTTTGCAACAAAAGGTAGTTTAAAAGTGCACATGAGATTACATACAGGGTCCAAACCATTCAAATGTTTCATTTGCAATTTACAATTCAGAACTTCTGGTCATCGAAAGGTACATTTACTCACGCATATGAAAGAGAATAATAagaatgatttgaaaaaaaaacaaaagatgaaaaaaattgatgtagCAACTGAAATGACTGAAAATTCTGTCGACAATCTGACTAATATTAATGATGAGTCTTTAGTCAATGTACCTCCAACTGCAGATTATTCTAATTTAGATACTATAACAATTGATACTACAGGTATACCAGACCAGTTAACTTTTAATGCTGATGGCacaatagtcaataataattcaatactcTCAGTTAATGAAAGTAATCAACTTGTGGCtaatttacattttcttcTCGCTAATGGATTAGTGACAATTCAAACAGATGAAGGTTTAATACCTTCATTGAATACTCCAGAAACTACTAATATCACTCAAGAGCCTACCACAGATCATGCGTTGAATGTGCCAAATACACTCGAGCAAGTATCGAATAACTCATCggcaaataatttaatgataactACTCAAATAGATAATCTTCCAACACCTCATACTGATAGGCAATCATCATCGTTACAGTTGAATGACTGTATGGCTTTTATTCCAATAACTTCAGCTAATACATGTCCTGTTAATCAAATTCCACCATCATCAACTGCCCCTATTTCCAAAATCAATGGAAAAAATACGAAAGTTACATCTAAAAAAGAATGCGATATTTGCGGAAAAACATTTATGAAACCATGCCAAGTAGAGAGGCATAAACGGATTCACACTGGTGAAAGACCTTTTAAGTGTGAATTATGTTCAAAGTCATTTGCACAAAAGTCTACTTTACAAATGCATCAGAAACATCACACCGGCGATAGACCATATTCCTGTCCACATTGTGATTATTCTTTCACTCAAAAAGGTAATCTTCAAACTCATCTCAAACGGGTTCATAAATTAGATACAATAGAagggaaaaaattaaagcatGGTCAGCAAATTGCCAGTGCAAAAATAATGCAAgatgaaacaaataatattacagaTAATGGGATACCCAATTTAGATGACATTTCATCTTTGGTTGAacttctaaaataa
- Protein Sequence
- MLTKPTSDVETVSLAIDTIPISFIIAEDGRTLLLAEQDDGALEWITTPIAFIQPDNTILSSVKVANENPSAISSLFQINIENVVPANNTSEATILQGKNTPIISNLTDVTNSKLILQQSSEGLTIVNTNNILQSENTSDQQSSFLVDTTKINKRSPGRPRKNAVNATDTDHKCEICGEEFKKQILYRKHMEQHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHLLLHEKEEHLFCKECEDVFPSKTQLDAHLRLHNEKWSTDDVKKCKLCSKQFTQPALYRIHIREHYKLQTKMMKQTKRGVTHKTVYKCKICLKIFQKPSQLMRHIRVHTGEKPFVCNVCNRSFTQKNSLQIHKWKHVGIRPYHCNQCNAKFSQKGNLNAHISRVHNLPEGEPVYSCMLCTCSFKKIGSLSIHMKRMHTVPIEGEEKCDSSINAADSNVQDATDFTNKGDILQEALKISGLSSKEKNLSSVEPNSKNNQVQTSYVTLLDRAPDGSLRKYVTIKQRNAGSTRWYACSYCHKEFKKPSDLLRHLRIHTQEKPYKCSQCYQSFALKSTMNAHERTHSGVKKYACGICAKKFACHSSLKAHTRTHTKPFVCTICEKSFGTNSVLKSHLKSHVKSKLKISPDAEALIPQIILEEPLVISDAGNKISVAHIKSKQNHVHADGDNTSRPHKCWVCPAAFRKISHLKQHYRRHTGERPFKCPKCERKFTSNSVLKAHLQTHEAARPYNCTVCNAKFSTQSSMKRHLITHSNKRPFMCPYCHKTFKTTVNCRKHMKIHKTELAQQQLEKQQAQEKGSLLEIPDKEPISVIPENISLSEDITNSFQQNINSDFTQAFNDQFSSISNKEKSFLAETNTTQAIENLSQTHNNNNNTNNNIGISQTLHADETGTITLPNYSGDQTLTAESIREIEETLNQQLFNIGVNLGLGNNLSRQISDSDVGALESREQPVLNIIYDNSKSLDTTGVNPMNTNIFNSQFDTFDMSHITLQTDSEMDIGITPANSTSMASILPKSAQEEQRLAPVSASNSQDNQSKKSEPLIMANNSMQSFRDVSKSISCPKYPKIIAKADTTDNSEILNFNQESNDLSVSSPSSILEHHLQLPCTYCDKLFSDEHQLKLHIEAHLSESMRSNAEANQNLSIILNNEASLQCHMCYSKGFDVISLKEHLKTHRGEKEFQCTQCSQKFCTNGGLSRHLKVHAGKTIDMWSCTICYETFSNENQLILHKKTHNPLGWNSPHTEPDSSQKEPIATETELLNMNTIKQELNSSVSEKLLFDAVVERDYLKIKNNDSTVQQEKREFVNKCEYCPKTFRKPSDLTRHIRTHTGERPYQCEHCEKSFAVKCTLDCHKKVHTGNQKFCCHVCNRLFATKGSLKVHMRLHTGSKPFKCFICNLQFRTSGHRKVHLLTHMKENNKNDLKKKQKMKKIDVATEMTENSVDNLTNINDESLVNVPPTADYSNLDTITIDTTGIPDQLTFNADGTIVNNNSILSVNESNQLVANLHFLLANGLVTIQTDEGLIPSLNTPETTNITQEPTTDHALNVPNTLEQVSNNSSANNLMITTQIDNLPTPHTDRQSSSLQLNDCMAFIPITSANTCPVNQIPPSSTAPISKINGKNTKVTSKKECDICGKTFMKPCQVERHKRIHTGERPFKCELCSKSFAQKSTLQMHQKHHTGDRPYSCPHCDYSFTQKGNLQTHLKRVHKLDTIEGKKLKHGQQIASAKIMQDETNNITDNGIPNLDDISSLVELLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00316948;
- 90% Identity
- iTF_00316948;
- 80% Identity
- -