Basic Information

Gene Symbol
-
Assembly
GCA_013357705.1
Location
NW:1354149-1357474[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.9 2.6e+03 -2.2 0.2 5 17 611 623 610 624 0.86
2 4 0.05 27 4.2 0.0 2 14 627 639 626 652 0.72
3 4 0.34 1.8e+02 1.5 0.0 29 45 685 701 680 702 0.83
4 4 2.1e-08 1.1e-05 24.6 0.1 1 43 707 750 707 753 0.92

Sequence Information

Coding Sequence
ATGAAAGATCCTGACCATATTTTCCatCATAGCTTAGAAAGAGAAGCTACAGAGCAAATTGAagtagatgataataattctgATGCAAATGAAGTAACGCACAAATATTCGAAGATTAAATCTTCAGATGATGTTGAtagtagaaaaagaaaaaaagtaaaaacagAATCAggcattgaaaataataacaactatAATGATAATCATGCATCTGATCTCTCTAGTGATGatagatataaaaagaaaaacaagaaaaaacataaaaaagttgaaactTCAGAAGTGTctcttaatgaaaattttaatggtGTTGAAGCTATTAGTGCcgataatgaaaaagttaaaatagaAAGTGATATGGAGACCGATCATGCgataaaatatcttgaaaataatgatttccATATCAATTGTGAATTAGATACCCTCAGtattaaaaagaagaaaaagaagaaaaagaaagaaagaattgaCGAATCGAATATACATACAAATCAGGGCCTAGAAGATATTAAAGTTGAAGATCAATTGCAATATACAAATAGTCAATTATTAGGTTTTAATTACTTAACTGATAATATTGATACtagtgttaaaaaaaagaaaaagaaaaaacataagGATGTAAAAATCGAAAACGCTCTCTTAGATAATCAATCTGAATCAAAAACTGAAGTAAAAGTACAAGTTGAAAATGGAGTAACGGATTCTGATACAAagCATAAACATTCAGAATGTGATGAAGTTAATTATTGCTTAAATGATTCAAGTATTAAAactgaaaaagaaaaggaagtagaaattgaagatgaaaacaatattgatgaaaatcataaaaaaagtaaaaaaaataagcacaAACAAGAAACGAATAATGAAACAGTAGAAATAGATTCGTTGATAAAAGAAAACGAttgtattgaagaaaaagatggTCTGGAATCAtcccaaaaagaaaaaagtaaaaagaaaaagagtaaaaagcATAGTAATGAAATAGATGTTATTGAAGAAGAAATCGATACAAAACATATTGAACTTATTGAATCTCagcataaaaagaaaaaaaagaaaaaacatataAAGGAATTAGTAGAAGAAGAATCAGAACCTGTGCATCTAGATTTAGATTATGAGACTtctaatcaaattaaaattgatgaagaaCACGTGTCTATTCGcaattgtaagaaaaaaaaaaagaaacattcgACAGATTCGGAACCTGTACATCTAGACTTGGATTATGTGGCTTCTGATCaagataaaattcaaaaagattaTTGCGATCGTtacaataataagaaaaaagattcAGAAGACTCGGAACCTGTACATCTAGACTTAGATTACATAGCTTCTGATCAAGAAACCAAAAGAAAAGACCAGATTGATAGTCTCagttataagaaaaaaaagaaaaaacataaacACCATAAGGAAGCGAGAGCATTTGAAAACGAAACAGACTGCGATTCACCAAAGAcaagatatgaaaaaatggaaaaaatccTTCAAGAAGAAAGTTCCATAAAGGATACATCAAATAAACAGCCTGAAGAAAGTAGTGGTTTTGAATCAGAAGAAGGCGATTATAGTGAAAGTGAAAGGATTCCTAGAATGAGCAAAACAAAaccatcaatttttattaagtatcCCAAATTAGCTAGGATTATGCAAGATTCAGAAAGTGATGACAATTATCCACATCTACAGCACCGAAAACTAACTTTATCTGAGGCTCtgAAACTGTCAGAACTTGAAATTCAATTACGGCATGAACCACCACCACAGCATCAAATAGAAAAGTATCCAGGTACTTGTACTTTGActgtagaagaaaaaaaaaagtttatggaaCATTGCGAATTAAAGAGTGGTAGATTTACTTATGAAGAAGATCAAAGAATAGTtcataattggaaaaaattctgcaaaaCGCATGGATGGAGAAGATCATTAATTTATCCATTCTTACATCAAACAAAGAAAGGATTCTTTTATATTGCTTCAGTCGAAGGAAGAAAGAAATTCGTTCAATTCTTAGCAAAAGGTTTGCTCAACAGAAGTCTGTACAGTGTTTATAATcgttttagaaatttatatggtactcataaaaaaactagGTATAcaaaagaagaagatgaacTACTAATGAAAGAAGTTAAAGATCCGTATGGTCGTAATAGATTTTCATTGATTGGAAGAAAATTGAACAGAACAAGAGCATCTGTATGGCGACGTTATAAATTGTTGCttgcaaagaaaaaagaaaactcaGATACTGAAGATGAAGTAACAAATAAATcaaccaataaataa
Protein Sequence
MKDPDHIFHHSLEREATEQIEVDDNNSDANEVTHKYSKIKSSDDVDSRKRKKVKTESGIENNNNYNDNHASDLSSDDRYKKKNKKKHKKVETSEVSLNENFNGVEAISADNEKVKIESDMETDHAIKYLENNDFHINCELDTLSIKKKKKKKKKERIDESNIHTNQGLEDIKVEDQLQYTNSQLLGFNYLTDNIDTSVKKKKKKKHKDVKIENALLDNQSESKTEVKVQVENGVTDSDTKHKHSECDEVNYCLNDSSIKTEKEKEVEIEDENNIDENHKKSKKNKHKQETNNETVEIDSLIKENDCIEEKDGLESSQKEKSKKKKSKKHSNEIDVIEEEIDTKHIELIESQHKKKKKKKHIKELVEEESEPVHLDLDYETSNQIKIDEEHVSIRNCKKKKKKHSTDSEPVHLDLDYVASDQDKIQKDYCDRYNNKKKDSEDSEPVHLDLDYIASDQETKRKDQIDSLSYKKKKKKHKHHKEARAFENETDCDSPKTRYEKMEKILQEESSIKDTSNKQPEESSGFESEEGDYSESERIPRMSKTKPSIFIKYPKLARIMQDSESDDNYPHLQHRKLTLSEALKLSELEIQLRHEPPPQHQIEKYPGTCTLTVEEKKKFMEHCELKSGRFTYEEDQRIVHNWKKFCKTHGWRRSLIYPFLHQTKKGFFYIASVEGRKKFVQFLAKGLLNRSLYSVYNRFRNLYGTHKKTRYTKEEDELLMKEVKDPYGRNRFSLIGRKLNRTRASVWRRYKLLLAKKKENSDTEDEVTNKSTNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-