Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_013357705.1
Location
NW:1440957-1443198[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.7e-08 4.1e-05 22.8 0.0 2 38 293 332 292 338 0.87
2 2 5.2e-10 2.8e-07 29.8 0.1 3 45 374 421 373 422 0.93

Sequence Information

Coding Sequence
ATGAAGAttgtagtaataattttaagtattttacaatttttgaacATATGTAAACTCTCAGTGGCTTGGGATGATGAAGAGTTGGAAGTTTTTGACGTTGTGGAGGAAGTAAATCagaatttttatgaacttcttggaatttcaaatGATGCTAATTCGACAACTATTAAAAAAGCTTTCCGTCAGTTATCACTCCAATTGCATCCTGACAAAAATGATGCACCAGATGCAGAAGTAAAATTCAGGAACttagtTGCTGTTTATGATGTCTTGAAAGATGTCAACAAACGGAAACATTATGATAATGTTCTCGTTAATGGATTGCCGAATTGGCGATCTGCGGTATACTACTACCGACATGTTCGAAAAATGGGATTGCTGGAAATgagtattatattatttatagtaataaCTATTGGACAATATCTTGTTGCATGGGCAgcttattttgaaaaaagataTACTTACGAACAAGTATTAGGtagtaaattacaaaaattacaaaaaaaaaatcgtaaaacCAAAACGGAAATTCCCGATCTAGCAGagatattggaaaaaataccAACACCAAGTGTTTGGAATACTCTACCATTTCAACTACCTTGTTGGACTGTAGCCTCCATCGTTGGAATTCCGTCGACAATTCGAGCGATAAAAGCTATGATTGAAGAACGGAAACGAAGGAAACAAGAGGAAGAAGCtgcattagctgaagaaaatgaagaaatggAATCAGAACCAATTGTGCGTGGTCCTCGGCGTCGTCGGGCAGGCTTCATACCACAAGAACAAAGTGGAAATATCACTGtagaaacgaaaaaaaaagaaaacattaaatCGACTAATGTTCATGAAAAGCCTAAATATACTGGTGGACTATGGACTGATGATGATATTGcagaattgattaaattagttaaaaaatatcctgGTGGTACACCAGAACGATGGGAAAAAATATCGGATGCAATGAATCGGAGTATTAGTGAAGTGACACATATGgctaaaaaaatcaaagatgAAGGTATAAAGCCTGGCCAGCAATCAGATGAGATTCCTATAAATACACAACCGAAAAAAGTCAAAACTCGTGTTGAAGTTGTTGATAATGTTTCTACTTGGACACAAGATCAGCAGAAAGCTTTGGAATCAGCACTCTTGAAATATCCTAAAGGATCATCTGTTGACAGATGGGAAAAAATTGCGAATTGTGTCGACGGAAAAACGAAAgaAGAGTGTCAGATAAGATATCGTCAGTTAGTTGATTtagtgaagaaaaaacaacaagatatgaattaa
Protein Sequence
MKIVVIILSILQFLNICKLSVAWDDEELEVFDVVEEVNQNFYELLGISNDANSTTIKKAFRQLSLQLHPDKNDAPDAEVKFRNLVAVYDVLKDVNKRKHYDNVLVNGLPNWRSAVYYYRHVRKMGLLEMSIILFIVITIGQYLVAWAAYFEKRYTYEQVLGSKLQKLQKKNRKTKTEIPDLAEILEKIPTPSVWNTLPFQLPCWTVASIVGIPSTIRAIKAMIEERKRRKQEEEAALAEENEEMESEPIVRGPRRRRAGFIPQEQSGNITVETKKKENIKSTNVHEKPKYTGGLWTDDDIAELIKLVKKYPGGTPERWEKISDAMNRSISEVTHMAKKIKDEGIKPGQQSDEIPINTQPKKVKTRVEVVDNVSTWTQDQQKALESALLKYPKGSSVDRWEKIANCVDGKTKEECQIRYRQLVDLVKKKQQDMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00687112;
90% Identity
iTF_00316719;
80% Identity
-