Cins005533.1
Basic Information
- Insect
- Chelonus insularis
- Gene Symbol
- ttk
- Assembly
- GCA_013357705.1
- Location
- NW:1996084-2019195[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 2.8e+03 -2.7 0.0 8 21 87 101 85 101 0.65 2 2 9.2e-13 7.2e-10 37.6 0.1 1 45 353 397 353 397 0.96
Sequence Information
- Coding Sequence
- ATGATGGGTACGGCATCAGATCAACATTACTGCTTACGATGGAACAATCATCAAGTCAACATGTTGAACGTCTTCGACGAATTACTACAAAACGAGGCGTTCACCGATGTCGCTATCGGAGTTGATGATGGCGTTTTTGTCAAGTGCCATAGAATGATTCTAGCTGCTTGTTCGccatattttcaaaaattattcatcgaAATACCTTGCAAAAATCCTATCATTATCCTTAAGGAtgttaaatatcatcaaataaaagCAATACTTGAATATATGTATAGAGGTGAAGTGAGCATTGCTCAAGATCAATTAGCAACATTATTAGATGTTGctgaatgtttaaaaataaagggTCTGGTTGAAGACAATGGTTCATCACCTTCTAATACATCAAATACTCATTCACCCCGGGCGTCTCGACGTCGGGAACGAAGAGAAACTGAAGAATCATTGTCTCCACCACCAAGCATTACCaccagtaataaaaataatatcgcACACAACTCCGAAAGTGGCAACGGTCAACCCTCTCCACCACACTCAACCAGTTCCACCTTCTACGGATATGGAAAATCATCATCAACCCGTGCACACAGCGAATCTCGTTTCACAACAACACCTCTGTGGAGTCATCCGTATGTTGGACAGAATCTGGCGGCATCTGTAGCACATCAAGCAGCATCACTCTCGGCTCATCATGCATCGCTTCTAGCAGCTGCTCACTTCGACAACGACCTACATAACCGTAAGCCTTTTACCCCAAATTTCCCGCTGCCTCAAGACACTCCTATACTACGAACTGTTCTTGGACAAGGTCACGCTGATAGCTCCCAAGGGATTCCACTGCTCCATCCGGACACTCAGGGATACCGTAGCCCAAGCAATGGTTCTGCCCATGACAACGCAGATGCGCGCCGCAACAGCATGGATGTCTCCCGAGTTCACAGCCCCTATGACTCCTACACCACCGAGGACAACGATAAGAAGCACTCTCCTAAATCATTTGACGACAACAAACCACGTCAGAAGCCTGAATGGAAACGATACAAACAGTACACGAAAGATGACATAAAAGCAGCTATTGATGCCGTTAAATCAGGAATGAGCGCACTTCAAGCATCTCGTAAATATCGAGTACCATCACGTACACTTTATGATAAGGTAAAAAAACTTGGTATCACCCATTCACGTGGCGGTGGCGTAAGGCGTAGTACAAATCATAGTGGAGCAAGTTTTCCATATGGCATTGGTGGTAATGTTAATGGCAGTATTTACGCACCTATAACTGATAACGATAATGAAAACCGAAGTGGATTAACTGAAAGTCCAGCGTCCATTATTGAAGCTGTTTTTGCTAAGAGTCGGGAAAACCTTATTGATCATGATACTTCAATGGATGCATCAAAAAGAACACCAAGTCCAAGTCAACCTCATCCGAATTATGATACGCAACAACAAAAAGAAGAACAACCACAACAACAATCACAAATTCCTGCGTCTGAAGATAATGATAATCAGGTAGAAGATTTATCTGTTAATCGTAAGTCAGATGTACGAGTTATTGTTCCGCCCattattaaagaagaaaaaattgacaatCCTGAAAATCAAAATTCCAAATGA
- Protein Sequence
- MMGTASDQHYCLRWNNHQVNMLNVFDELLQNEAFTDVAIGVDDGVFVKCHRMILAACSPYFQKLFIEIPCKNPIIILKDVKYHQIKAILEYMYRGEVSIAQDQLATLLDVAECLKIKGLVEDNGSSPSNTSNTHSPRASRRRERRETEESLSPPPSITTSNKNNIAHNSESGNGQPSPPHSTSSTFYGYGKSSSTRAHSESRFTTTPLWSHPYVGQNLAASVAHQAASLSAHHASLLAAAHFDNDLHNRKPFTPNFPLPQDTPILRTVLGQGHADSSQGIPLLHPDTQGYRSPSNGSAHDNADARRNSMDVSRVHSPYDSYTTEDNDKKHSPKSFDDNKPRQKPEWKRYKQYTKDDIKAAIDAVKSGMSALQASRKYRVPSRTLYDKVKKLGITHSRGGGVRRSTNHSGASFPYGIGGNVNGSIYAPITDNDNENRSGLTESPASIIEAVFAKSRENLIDHDTSMDASKRTPSPSQPHPNYDTQQQKEEQPQQQSQIPASEDNDNQVEDLSVNRKSDVRVIVPPIIKEEKIDNPENQNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00317558;
- 90% Identity
- iTF_00317558;
- 80% Identity
- iTF_00317558;