Cfor004490.1
Basic Information
- Insect
- Chelonus formosanus
- Gene Symbol
- pnr
- Assembly
- GCA_028641665.1
- Location
- CM054002.1:4976274-4981540[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 1.2e-14 53.9 3.2 1 34 168 200 168 202 0.97 2 2 4.7e-19 1.8e-15 56.6 6.2 1 35 227 260 227 261 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGAGCGGAAGTGGTGGTTACGGAACGGGAACCGACTACCAAACTCAATCCcaacaacagcagcaacagcaacaacaacagcaacagcagcaacaacaacatAATCAACAGCTTCAAACTCCTGTATACGTTCCTTCATCGAGACCTGCAATTCCATCAGCAGCTACGGCGCAGTATCACTCATTTCCTAGTTCCGCCTCACCCGCATGGGAAAAAACGACATCATGGCAACACAGTGTCGATACTTATGCTCACCATGCTCTTGCTGGACACACTGGAGGATCGACGGCAGGAATGGGAGCTCATGGAGGACATGCACATCCTCATGCTGGTCATCCTCACACTGGACATCCACATTCTACACTAGCGTCTCCATTTTATGCTCAAAATGTTGCTATGATGTCTTCGTGGAGAGCATATGACAGTGCTAGTTTCCAACGTGCTTCCCCTTATGATACAGCGATGGACTTTCAGTTCGCCGAGGGACGTGAGTGCGTTAATTGCGGTGCAATTTCCACCCCATTATGGCGACGCGACGGTACTGGACATTATTTGTGCAATGCTTGTGGGCTCTATCACAAAATGAATGGCATGAATAGGCCTCTTATAAAACCATCCAAACGCCTtATTTCCGAATTCCAGACGGCGACCAGACGACTTGGACTTTGCTGCACCAATTGTGGTACACGCACTACAACTCTTTGGAGGCGTAACAATGAAGGGGAACCAGTTTGTAATGCATGTggtctttattttaaattacatggAGTAAACCGACCTTTAGCCATGCGTAAAGACGGAATACAAACACGTAAACGCAAACCGAAAAAGACACCGGAAACTAATGCGTCCCGAACATCTTCCGGGCATGAACATGAGACTTCCACTTCAACCAATTCATCGCCATCAAatgatttaaaaaatagtcaacAGCATCAAATAGAGTCAGCAaagtcatcatcatcatcatcttcatcatcctCATCATCAATATCAACTGATAGACCAGTGTATCTAGGTCATACATCACTATTAGCAACTGGTGGAGTACCAGCAGTAAAGACAGAGCCACGAAGTTGTGATGGTTTAGTTGGACAAACATATTCTTCTTATTATCAACATCCTCACCAATTAGATACTCCTACCAGTGAACATCAACAGCctcaaaattattacaatgctCAGGACACTTATCATCACCAACATCATGTAGCTACTGCTGCTAAATTGCTTGCTTCTActtag
- Protein Sequence
- MFHGSGSGGYGTGTDYQTQSQQQQQQQQQQQQQQQQHNQQLQTPVYVPSSRPAIPSAATAQYHSFPSSASPAWEKTTSWQHSVDTYAHHALAGHTGGSTAGMGAHGGHAHPHAGHPHTGHPHSTLASPFYAQNVAMMSSWRAYDSASFQRASPYDTAMDFQFAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPETNASRTSSGHEHETSTSTNSSPSNDLKNSQQHQIESAKSSSSSSSSSSSSISTDRPVYLGHTSLLATGGVPAVKTEPRSCDGLVGQTYSSYYQHPHQLDTPTSEHQQPQNYYNAQDTYHHQHHVATAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01005682;
- 90% Identity
- iTF_00317786;
- 80% Identity
- iTF_00317786;