Basic Information

Insect: Chelonus formosanus
Gene Symbol: -
Assembly: GCA_028641665.1
Location: CM054003.1:6025928-6030712[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00096 0.11 13.3 0.0 2 20 143 161 142 162 0.94

2 16 0.0055 0.64 10.9 2.0 2 23 170 192 169 192 0.96

3 16 9.7 1.1e+03 0.7 9.1 1 23 203 226 203 226 0.96

4 16 0.13 15 6.6 0.6 5 23 627 646 626 646 0.92

5 16 0.0021 0.24 12.2 0.4 1 23 651 673 651 673 0.97

6 16 0.0089 1 10.3 3.3 1 20 700 719 700 720 0.95

7 16 1.1 1.3e+02 3.6 1.5 1 21 842 862 842 863 0.94

8 16 0.00099 0.11 13.3 0.9 2 23 871 893 870 893 0.96

9 16 0.02 2.3 9.2 5.2 3 23 905 926 903 926 0.94

10 16 0.032 3.7 8.5 0.3 2 19 946 963 945 966 0.92

11 16 0.043 5 8.1 0.1 2 23 974 996 973 996 0.94

12 16 0.043 5 8.1 6.2 1 23 1006 1029 1006 1029 0.93

13 16 0.0055 0.63 10.9 1.3 1 20 1048 1067 1048 1069 0.94

14 16 0.00025 0.028 15.2 2.3 1 23 1076 1099 1076 1099 0.98

15 16 0.00014 0.016 16.0 0.7 1 23 1182 1204 1182 1204 0.98

16 16 0.00089 0.1 13.4 0.5 3 23 1407 1428 1406 1428 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00096	0.11	13.3	0.0	2	20	143	161	142	162	0.94
2	16	0.0055	0.64	10.9	2.0	2	23	170	192	169	192	0.96
3	16	9.7	1.1e+03	0.7	9.1	1	23	203	226	203	226	0.96
4	16	0.13	15	6.6	0.6	5	23	627	646	626	646	0.92
5	16	0.0021	0.24	12.2	0.4	1	23	651	673	651	673	0.97
6	16	0.0089	1	10.3	3.3	1	20	700	719	700	720	0.95
7	16	1.1	1.3e+02	3.6	1.5	1	21	842	862	842	863	0.94
8	16	0.00099	0.11	13.3	0.9	2	23	871	893	870	893	0.96
9	16	0.02	2.3	9.2	5.2	3	23	905	926	903	926	0.94
10	16	0.032	3.7	8.5	0.3	2	19	946	963	945	966	0.92
11	16	0.043	5	8.1	0.1	2	23	974	996	973	996	0.94
12	16	0.043	5	8.1	6.2	1	23	1006	1029	1006	1029	0.93
13	16	0.0055	0.63	10.9	1.3	1	20	1048	1067	1048	1069	0.94
14	16	0.00025	0.028	15.2	2.3	1	23	1076	1099	1076	1099	0.98
15	16	0.00014	0.016	16.0	0.7	1	23	1182	1204	1182	1204	0.98
16	16	0.00089	0.1	13.4	0.5	3	23	1407	1428	1406	1428	0.94

Sequence Information

Coding Sequence: atggcTCGAGCAATTATATATAATGGACACTCGTCAGTTGTTCCAATTTTTGACGGTAGCCAAAATGGATTTATTCccataataaaaatcaaagaagAGCCAATTGATGacgataaaaatgatgaagaatatACGAATTCTACGGTACGTAATATTTCACATAATTTACGATCAAAACAATCAGCATCGAAAAAGTTTTtggatgaaaataatgaagaattagAATTAACTCCAAAACGACTCACTCGAAGATCAGCTGCAATTGAAGCATCAAAAAGGTTTCTAGATGATGGAGAAAATGCCAAAGGTatagataatgataataacagtaaaaaattatcaaaagaagTATCAACATCTAAAACTATCAAAAATGTTAGTAACTCTCCATCTAATACATCCAAATCTCCATCTCGTCAGACTTGGGAATGTGAGATTTGTTATGCAAGTTTTTCTGATccatattatttgaaaaaacacGTAGGTTACTATACTCCTTCTTCATTAAGATGCCGtaagtgtaataaaatttttggtgATGTATATAAATTGATGCATCATCGAGAAACCGTTCATCGTAACATTGATCTATCAGgcattcataaatttcaatgtgatttttgtaaacatttaaTGAAGACTAAACAGAATCTTCAACAGCATATTTGTCATTATCATAAAGATGAAATTGGAACTACTTCTAGgcaaatacataataaaaatcagacaaaagaaaaagttatatCACCATCAACTCGACTGAATACTTCCGATTCATCAATTAGACAGCATAGAGCAGTAAAAAGGAAAAGAACACAATCTTGTTCTTATGCAGAGAATAGACTAATTATTCCAGAACATTCTATTAATACTCGATTAAATTCAGAAAGAAAGTCTTTATTAGGAATACAAGCGGATAGTCATGGAGACATAACATCATTATCGGACAAAAGTCAACTCTCAAATAGCAACTCGCCAAAAAAATCGATTCCTAATACAAAGTTTCCAGGTACCAACTCCTCTTATCCCCCATTAGTCCAAATTTATGCAATTCCGAACGAAGTCGAGGCTTTATTAAGTGATTGTGAGGAAATTCCGGCGAAGAGAATGAAACTTCAagttttatctaataaaaatagcgATAATGGTACAAAAATagattacaatttaaaaaagactTCTTTTAATACACCTATCAAACTAGAAGATTCATCGCGCACTCTAGCACGAACAATCCAAAcactgaaagaaaattttaattgtttagacTGTAGTGtcaaattagaaaaattaaaaactttaccAGATTCTTCAAAAGGTGGACatgataaattgttaaatacatCCAAATCACCAGAGAAGACACCAAAAAAATCACCAGAAAAatcattggaaaaattacttgataaatCTCCTGAAAAATCTTCAGAAGAAccattagaaatattattcgaCAAATCTCCAGTGAAACCATTGAAAAAATCTTCAGAAGAACCACTAGAAATAATATTCGACAAATCTCCGAAAAAGCCATCAGAGAAATCatcaagagaaaaagaatCATTACCTGTTATTGGACCAATACAAACATCTTCAACAACATTAGATTCAAGAAGTTCTACCCCCACTGTTTGTGGAACAATTGGGATAGAATTAGAGAATCTTGATATTGCTcttaaaaaattggaaactCCTAAAAGAATATCGACTACTAGGAGTTCTTCAAGCTCCATTTTTTCATTGGATGGTATTAATATGGAACACTCTTATTCTGCTGCTCCATCTGTAGTTTctgtagaaaatgaaaaaacggaagaaaaggaagaaaataatGGAGATAAACAACcaggaaaaattaaatctatatatttatcaagCATTTGTCGCACTCGCTTTACAACTCagaaaaaactaatttatcattatttatattatcatagtTATCCTAATTATATTTGCGCTGTGTGTAGAACAGAATGCTCAAGATTAGGTGAACTCAAAAAACATTTAGCAGTACATTGCATTTCAATTGTTAAGTCGTTAGATGATCGATCTCCGATAGACCTAAAAGGTCCTTGcgaaaattcaaagaaaaaatttatgtgcaaaggttgtaaaaaatgttttcctaCGCTTACCTGCTTGGAAGAGCATACTGGACAATGCTCAATATTAGAAGCTAAAAGAGAGAAGAAACGTCAATCTAATACTCACGAAACATCTATTGTTAATGATCAAAATTCTTCTGAAAATTTAGTGATAGATCATAGTGATGAAAGTCCAGCTCTTTCACAACCTTCCTCATCAGAAAGTAAAATCAAagagtttgaaaataattcatcagaaataaattatccatCACAACCTGCTCCACCTGCACTACCTTTGTCAATACCTCCAAATATTGATACACATAAAAATTCGATTAACGCATTAGAACTAACTTTacaaaatatggaaaaatggTCTCAATACACTCACTCAGTAGCTCCGCGTCAGAAATCTAACAACGACTATTTGCAACATCAATGTAAAACTTGTTACTCTCGATTTCTAAGTGAAGATAATCTAAATGAACATGTGAAAAAATACGAGCCAAAACACATGAGTCGATGTGAAAAATGTGGAACGTGTTTTCCATCCATAGGACTATTATCTGCTCACAAGAAATCTGCTCACTCCACTGATTCAATGATTTATAGAAAGTATGGTTGTCTCATTTGTGATCAAGGATTtagcaaaaagaaaaatttacacCATCATACAATGCATATCCATTATGCTGAGTTAATAGTTTACACTGAATCTCCAGAATTAGATACAGAATGCGAAATGACTTGTAAAATTTGTTATGTAGCTTTCAAAACTCGAAAACAGTTTATTGAACATTCAATGTATTATTACGATAATCGTACTGTAACATGTGATGTATGTGGTGAAGAATTTGAGGGTCAATATAAAGCTCATGCTCATATACAACAGGtgcactttaaaaaattttacacatCATATACTTATTCATGCAAAAAATGCCAAGATCGATTTAAATATGAATCACACTTGCGATCCCATATATTTCATGTTCACAAGGATCAAATAGTAAATTCACAATGTACAAATCAACATCAGCCGAGGCAATGCTTTGTATGCTCGGTTTGTACAGAGtgtttttatactttaaaGTTATTGAAAGAACATAAGATGGAATTTTCTAATACTGGACCTTATCAGTGCGACGATTGTGATCGTAAATGTGAAACTCTAAGATTACTCGAAGAACATCAAAAAAGGAGTCACTATAACAGTATACCTCATTTCAAGAAATGTAATCTATGTAGTGAATTTGTATCTCCAAATTTATGGCTTGttcattttaaacattttcatgAGAATGTAACACCTTTAGAACTATATATGAGAAATTATGCTGAATCAAGAAGAAGTCAAGAGCCTAATGTTCTTACTACATATGATAATGACAAAAATCAGAGTAATTTTGGTGTTTGGATTTCTTCAGaacaatttttagaaaatgtcATTGAATATACTTGTGCTATTTGTGACATGAAATTCAAGTCTGATAATGAGTTAAAAGAGCatagaaaaattcataaatataatgatcCAGATGTAACGACACCACAACAGAAAGATGGATCTGAAAATCATGATCTTGTACCATTCACTTTTGTCAATCAAGAATCGTTCGAGCCAGAACCACCAGTGGGAACTTATGAAAGTGATGAAGATACcaagtataatttttcaattgctaATATTTGTTCTGTAGAATTGAAGGAATATGATAGTTTATATAATCCTGATAcaacaaataaagaaatgaattcTATAGGcgataattttaatcattgtgATGCTTGTCATTACAATAGAAAATTAGAATATTCTGATCACACATACCAAAAACTTAAGAGACATGAAGCAACATGTAATGAAACTTTAACTACAAGAAATGTTAAACAAACGTCACTTCCGAATGTTCATCGAGAATTTCCTGCTTCAAATCAACCAGAACTTATTGTGAAGAGTAAAGAAACCGCAGAAGTACCGCAAAAAACTTCAACAAGCAGTACACAATCGAGTTTAGGAAGTGATCCACAACCTCAGCAGAAAAAAACGTCAGGAACGTGTAAAATACAAACTACAATAAATCAATACTTCCAAAAATCTCCATCGGAAAAAAACATATCAGCTTTATGTGACATTTGCGGATTAGCTTTTGAGAAATCTTCTGCATTAATTCGACATAAACACAATGACCATCGTGATGATAAGTCTTCGCAAAACTATCGTCCAACAAAAATCCAAAGCTCCAATACTTCCCAAAATACAAATACTCCTTTTCCTTTATCATTTAAAGATCCGCTTATCATTCAAAAACCTTCAcctcaaaaatatgttattactATTcgtgacgatgatgatgataacgATGATGAGGCACctgttattaataatcatactGATATTTTAACAAGACCTCCACGCACTGATAACTTTCAAAAATCTAGTTCTCTAAGTGGTTCGTCGATggataataatcaatttcaacGAATAACTTTAGTTGATAGCGGAATATTATATTCCTATCTTCAAAAACCagtcaattaa
Protein Sequence: MARAIIYNGHSSVVPIFDGSQNGFIPIIKIKEEPIDDDKNDEEYTNSTVRNISHNLRSKQSASKKFLDENNEELELTPKRLTRRSAAIEASKRFLDDGENAKGIDNDNNSKKLSKEVSTSKTIKNVSNSPSNTSKSPSRQTWECEICYASFSDPYYLKKHVGYYTPSSLRCRKCNKIFGDVYKLMHHRETVHRNIDLSGIHKFQCDFCKHLMKTKQNLQQHICHYHKDEIGTTSRQIHNKNQTKEKVISPSTRLNTSDSSIRQHRAVKRKRTQSCSYAENRLIIPEHSINTRLNSERKSLLGIQADSHGDITSLSDKSQLSNSNSPKKSIPNTKFPGTNSSYPPLVQIYAIPNEVEALLSDCEEIPAKRMKLQVLSNKNSDNGTKIDYNLKKTSFNTPIKLEDSSRTLARTIQTLKENFNCLDCSVKLEKLKTLPDSSKGGHDKLLNTSKSPEKTPKKSPEKSLEKLLDKSPEKSSEEPLEILFDKSPVKPLKKSSEEPLEIIFDKSPKKPSEKSSREKESLPVIGPIQTSSTTLDSRSSTPTVCGTIGIELENLDIALKKLETPKRISTTRSSSSSIFSLDGINMEHSYSAAPSVVSVENEKTEEKEENNGDKQPGKIKSIYLSSICRTRFTTQKKLIYHYLYYHSYPNYICAVCRTECSRLGELKKHLAVHCISIVKSLDDRSPIDLKGPCENSKKKFMCKGCKKCFPTLTCLEEHTGQCSILEAKREKKRQSNTHETSIVNDQNSSENLVIDHSDESPALSQPSSSESKIKEFENNSSEINYPSQPAPPALPLSIPPNIDTHKNSINALELTLQNMEKWSQYTHSVAPRQKSNNDYLQHQCKTCYSRFLSEDNLNEHVKKYEPKHMSRCEKCGTCFPSIGLLSAHKKSAHSTDSMIYRKYGCLICDQGFSKKKNLHHHTMHIHYAELIVYTESPELDTECEMTCKICYVAFKTRKQFIEHSMYYYDNRTVTCDVCGEEFEGQYKAHAHIQQVHFKKFYTSYTYSCKKCQDRFKYESHLRSHIFHVHKDQIVNSQCTNQHQPRQCFVCSVCTECFYTLKLLKEHKMEFSNTGPYQCDDCDRKCETLRLLEEHQKRSHYNSIPHFKKCNLCSEFVSPNLWLVHFKHFHENVTPLELYMRNYAESRRSQEPNVLTTYDNDKNQSNFGVWISSEQFLENVIEYTCAICDMKFKSDNELKEHRKIHKYNDPDVTTPQQKDGSENHDLVPFTFVNQESFEPEPPVGTYESDEDTKYNFSIANICSVELKEYDSLYNPDTTNKEMNSIGDNFNHCDACHYNRKLEYSDHTYQKLKRHEATCNETLTTRNVKQTSLPNVHREFPASNQPELIVKSKETAEVPQKTSTSSTQSSLGSDPQPQQKKTSGTCKIQTTINQYFQKSPSEKNISALCDICGLAFEKSSALIRHKHNDHRDDKSSQNYRPTKIQSSNTSQNTNTPFPLSFKDPLIIQKPSPQKYVITIRDDDDDNDDEAPVINNHTDILTRPPRTDNFQKSSSLSGSSMDNNQFQRITLVDSGILYSYLQKPVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00317685;
90% Identity: -
80% Identity: -