Cfor004437.1
Basic Information
- Insect
- Chelonus formosanus
- Gene Symbol
- Hivep1
- Assembly
- GCA_028641665.1
- Location
- CM054002.1:4338231-4345147[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 5.4e-05 0.0063 17.2 0.6 1 23 68 90 68 90 0.98 2 9 0.0008 0.093 13.5 2.7 1 21 96 116 96 120 0.89 3 9 0.013 1.5 9.7 0.8 1 21 338 358 338 359 0.94 4 9 1.2e-06 0.00014 22.4 1.6 1 23 1157 1179 1157 1179 0.99 5 9 5.4e-06 0.00063 20.4 5.2 1 23 1185 1209 1185 1209 0.92 6 9 6.7e-06 0.00078 20.1 0.2 3 23 1702 1722 1700 1722 0.97 7 9 0.00065 0.076 13.8 1.8 1 23 1728 1752 1728 1752 0.92 8 9 0.0011 0.13 13.1 3.3 1 23 1773 1797 1773 1797 0.93 9 9 0.16 18 6.3 1.0 1 19 1944 1962 1944 1967 0.94
Sequence Information
- Coding Sequence
- atggCAACTGCCGAGATGGTATCTCCggcagaaattaaaaatgaaaatactatTCCAATTGCCACACCACCAGTATCATCAGAGGTGCCTACCAAGAAACGTGACATCACTGATTttcctaaaaatattaaagagtCTTCCAAAAGTAAAGAAACAACTCCGGAATTGGAGGGTGAACACACTGAGACTAAAAAAACGGGATACGTTTGCCCTTATTGCAAATTATCATGTGCCAAACCTAGTGTTCTCCAAAAACATATTAGGGCTCACACTAATGAACGACCTTATCCATGTGTATTGTGTGGATTTGCTTTCAAAACTAAAtctaatttatataaacattgCCGGTCACGTGCTCACGTGCTAAAAATGGAAGGTGGTGATACTAgcaaggTATCTGAGGATTCAGACATAAGTTTATCAGATAGTGCTAGTAACGGAACTGGAACTCCACCACCTACATCAACAGTTACTTCTGCTAATGCTGTGTCTAATGCTAAAATAGTTAAAACTGggaaaatttataaaccaaAGTTTCATACAGCTCTTCAGTGTGTTAATAATGATACAGATATATCACTTGGTCCACCTACTAGTATACcaacaaataattcaacatcTTTAACATCAACATCATCGTTGTCAGTaccaacatcatcatcatccaCAACTGTATCAACAATATCTAAAAGTAATGTTGAACAATTACAAGAGcatattgacaaaataattacTGACAATCAGGCGATAGTAGAAGCAGTTGATCCAAGACTGCATAAACTTGTAAGTCAAAGACAGCAAAGTCTTGTGGAGCAAAATAAACCATGTGAACAGCCACTCAATTTGTCTTCCAGTGAACTAATAGATGTTTCTTCCAAAAAACGATGTTATAGTGAAAGTTTTGTTATAGATGATAAAGAAGGTGAcagtaaaaaacaaaatttccaAGGTTCTATTatcaaagatttattattaaaaaatcgtgGATCTACTGAACCCGTGAATGAAagttttttctgtaatttttgcaaaattttttatgcaagtGCTGATAATTTAGAAACTCATCGTAAATATTATTGCAAACAATCATCTAGTCCGAAACACGAATTGCAATTAACTTTagagaaaaaagatgattttgaTAATAGTAAATCTGAATACTATAGTACAATTCAACCTCTACCCTCACCAGGACCTCTACTAGGTAATACTCGATTGGTTGATGCATCTTATACACCGTCTAAAAAACATAAACCAGATCTTACAATTCCAACAAGCCTTAGATCTCTCGAAGAATTATCCAAATATCCTAGACCAAATTCCTTACAGATGTTCGGAGGTGAAGTTAGAATATTAGATAACACAGGTGAAACTAAAACGATGAGAATAGAACCCAGACAGACTAATTCACCTATATCAAGTGATGATTTAACTATTAATCAGATTAATCAAAAAGGTGCATCATCAGAAACGTCATCAATTGTCGTAAGATCCGGTCTTCATTCAGGAGGTACGATGGTTCATAAGCCACCAGGAACACCAGTAACTACTTCGAATTCTTCCATATCTCTTCCTAATACACCGAAAATGTTAGCGCCTATTATACCAAACATATCAACTCCTAACTTAGCACCAACAATGTCATCatgttacaattattttgaatcaCATATGGTTAATCCTTCAACGAATATTACTGCTTACAGTTCACTACAAACTGTACCTCAGTCTCCAGCGTCTACTGCTGGTATAACCACTATTCTTCATGGTGGCAAAGTGATACCTTATGTTCCTGGAATACCTGGACCACATTCGCTTACAACTGCAGTACCAGTGGTGGACCATGTCATACAATCGTCTTCTCCTTCCGTCCAACAGTCTACTGCTGATCTTGCTGCTAATAAAATTACTCCAACAACATTTCATGTTGCCACCTTACCTTCTCATCAGCCATTAGATCTCGCCAGCTCGATTAAATTTCAACCTCATTCTCTTCCAAAATCTACACcgaatttacaaataaatcatattaacaataataataataatttaaatccacCTGTCCAACCGTTAGATTTGGTGAATTCAACACCAACTTTAGATTCAAAATCTATGAAAGGATTTAAACATAATTCTAATGGTTTTATTAATCTCAAAGTACCACCAAAACtcgaagaaaaattaaaaaatagaggTTTATCATCTAATTCTATTCCAACTACggagtttattaaaaatgatatgttCAATAATGACAATCAGCATCATCAATATGTTAAATCTGGTCAAGTATTCAAATATCAATCACCGGATTCACATAAGgaaatcaatgataaaatattgaaagcagaaaaatcaatgaattatttaaatggagAAAATAGTAGTGTATCATCTAAATTCATAACAGAAAATCGTAAACGATCAGGTAACTGGAGTGATTCAGATTATTTTAGCCAATCATCATCTATTGATAGTTTAACTACAACAAGTTGTAATTCCGCAACAAAAGTAGAGTCATCATTACTAACTCAAGAAAATGGTAAAGTGATTCGTGTACTTTcagatgattttaaaaatccaCAATCTTATGGTAATGTTAATGGAAATTCACGAACAATGTATTCAGAAAATGTTACTCCAGtggttattataaatttagatTCATCCAAAGTATCGTCTATTGATCCTGAATTATCTAAATCAGATTCATTAGATAATGTAATAGtgtatgatgataaatttaattcaaaaaaacttaaaatggataaattagatacagataaaaaatatatgatggatgaaaaagaagaagaagaaaaagaaaatgaaactgaagaagaaaaagtgaatagagttgatagtaaaaatgatcatCAAGTTTCTGTTAAATTTCTGAGGCCAACATCATTGCCATTAAAACCGGGTacatttactccaaaaaaacaTCATGGAATTACTCCTACAGCCAATACTCTTCCTCTAATAAGTCCTGAAACACCAAGACCAAGAAAATCATACGGTCAACTTTATCTCAATGGACATGCTTATACTTATCTTGGCCTAAAATGTTCAACAAGAGTATTTTATTGTACTCTCAATAGACCACAACCAATGTACGTAATTCAACAACATGGTTTATCAATGTATTCTAATTGGAAAATTTGCAAAGAAGCACCACCAGATTTAGATATGGCACATTATGACTCACGGAATCGTTCGTTTGATTATACAATTGCCTGGAAGAAACAAGACGTCATTCTTACCCACTCCTCACAAAGACCAACTACGTTAGTAACTAATAATTCCACCGATAATTGTTTTGAAGAAAATGACGCAACCACCGCATTAATACCAACGACAACAACCGCATtgcaaagtaaaaataaacgtATCAAAATTTTCGATGGCGgatttaaaagtaatgaagATTATACTTATGTACGAGGAAGAGGAAGAGGAAGATATGTTTGTGAGGAATGTGGGATACGATGTAAGAAACCTTCGATGTTAAAGAAACATATCAGAACACATACAGATGTTCGGCCGTATACCTGTAAACATTGTACttttagttttaaaacaaAAGGTAATTTAACAAAACATATGAAATCGAAGGCACATTACAAAAAGTGTGTTGAATTGGGAATAAATCCTGTACCGACTGTTGTTTGTGATGACAATATTGATAAAGAAGCCATTGCTAAATTAGTTGCCGCTGGTGGTGATAATGTGGCGGACGAGTCTTccgaagaagaagaagaaacagATGTTGATGAAAGTGATGAATCAGGAAATGAAGAACAAGAAGCAGCTCAAAGTCTACTTAGTCTTTCGCAACCAAATAGTCATCAGATTAGACTTCCTGGTCTCACGCCTGTTGGACGACCATCAACCTATCCTTATACTTTAACagattttcaaattaataaatcattaaacagCAATGTAATAACTACAACCACCAACACCACGTCTACTAATAGTTCTCTCAGTATTGTAACATCAACAACACTCATTCAAAGTGAAGCTGTTACTAATCGttattattttccatcaaGTAAATCGTTGGAGGATTGTCGAGATAGTGTAATCAGATCAACCAAGTTGGACAATGATATTGAAATTGATACTAAAAATACTTCTATTTCTCGATATCAAtcactatcatcatcatcgttatcttcatcatcatcattatcatcctcatcatcatcatcttcgtCATCATCTCCaccattatcatcattatcacaACCAATGgatttaacaacaaaaacCTCTCAATTACCTGTTCAACTGTCTTCCACTTCGTCTTCTCCTTCATCATCGCCTTCTCTAGCTTATATTAAGCGACCAATTCTATCAGACATTCTCACGCCGGTCTCAGAGCCAATACTCATGCAAACAATTGTACAGACAATGGAGAGACTACCGTTACAAGGCAAAGAATGGAAACCTGATAATGCAAATGGTCATATGCTGCAAGCTTACTTAACAGAGAGACATGTTATGGATAGTAAAATGAAACAACAATATCGTATAGGGACTTGTAATAgtaaacttgataaaaaacaaataacataTTCTAATGTAAATTTTGTCGATTATTCACATAGCAGTGTAATTATAGACCGAAGTTGTGCTTTAACAAATACAGTCAGTACTACTGGTATTATTTATGCGGATCCTAACAGTAGGATGCCACAAATGGTTTTGACAGAAATTGCTTTATCAAGAAAAGAAGACAATGTTAAAGTTGAAACTACATGTGAGAAACAAGCCAATGACATTGATATGTTTTATGTTAAAAGAAAATTAATGAAGATTACTGAAATATCTAAACCATCTTTTTCTATtggagatttaaaaaattctgaaagatcagatatgaaaattaatgtaGATTTATCGAAACCATGTACAATTGATAATTCACTTAAACAAAATGTAGcaagaaaaatgattgttgGAGGTCCTAGATTTCGATCACCATCTCCATCAAGAGGAAATTTACCTAAACCTCAAGCGGAATTTTTACAACCATCTAGTGGGCATACACCTAATTATGTGAGTGTAACTGAGGACGGAAGAAGTATTTGTGGAATTTGCAACAAAATATTCAGCAAACCAAGTCAACTGAGATTGCACATAAACATTCATTACTTTGAACGGCCATTCAGATGTGAGAGTTGTGCAGTCTCTTTTCGTACAAAAGGACACTTGACAAAACATGAACGCTCAGTTTCACATCATAATAAAGTGAGCATGACTTCTACATTCGGAGCAGCTACTACAAGTAATCCAAGACCATTCAAATGTACTGACTGTAAAATAGCATTCAGAATACACGGTCATCTTGCTAAACATTTAAGAAGTAAAATGCATATCATGAAGTTAGAATGCTTAGGAAAGTTACCTTTTGGTACTTACGCTGAAATGGAAAGGTCTGGTGTTAATTTGAATGATATCGACACAACAGACTGTGATAATAGTCTTGCCAGTCTTCagATGTTGGCCCAAAAGCTGTATGAAAAAGATCCAAGTAAAATGAGCCAATGGGACACTGAAGTAGTTCCACATCAGGGAACAAGTGGTGGTGAAACATCATCAGATGAAGGTGAACCAATATCTTCAAATACAATTCAACAAACACAACTACCCTATATTCCTTTGATGACATCAGATATATCAGTATCTAGAGCATATCAAACATCAAATACTTTAGTAAGTGGtaatgatattaacaaacCAGTGAGTGAATCTCACGTGCCAAATTTACgctttgatgataataattcttcTTCTGCTTCATTATCATTACCGTATAAGTGCCAAAtgtgtgaaaaaatattaacaagtGTAAATGAATTAAGAGTCCATTGCTTCGTTGAACATAATATCGAATATAAGAGCATACAAAGTGATTGTGGTAAAGAAAAtgcacaaaataaaaaaatcattgatttagTTGCCGTCCCTTATGACGATAACagtaaacagaaaaataatgatacgTGA
- Protein Sequence
- MATAEMVSPAEIKNENTIPIATPPVSSEVPTKKRDITDFPKNIKESSKSKETTPELEGEHTETKKTGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVLCGFAFKTKSNLYKHCRSRAHVLKMEGGDTSKVSEDSDISLSDSASNGTGTPPPTSTVTSANAVSNAKIVKTGKIYKPKFHTALQCVNNDTDISLGPPTSIPTNNSTSLTSTSSLSVPTSSSSTTVSTISKSNVEQLQEHIDKIITDNQAIVEAVDPRLHKLVSQRQQSLVEQNKPCEQPLNLSSSELIDVSSKKRCYSESFVIDDKEGDSKKQNFQGSIIKDLLLKNRGSTEPVNESFFCNFCKIFYASADNLETHRKYYCKQSSSPKHELQLTLEKKDDFDNSKSEYYSTIQPLPSPGPLLGNTRLVDASYTPSKKHKPDLTIPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPISSDDLTINQINQKGASSETSSIVVRSGLHSGGTMVHKPPGTPVTTSNSSISLPNTPKMLAPIIPNISTPNLAPTMSSCYNYFESHMVNPSTNITAYSSLQTVPQSPASTAGITTILHGGKVIPYVPGIPGPHSLTTAVPVVDHVIQSSSPSVQQSTADLAANKITPTTFHVATLPSHQPLDLASSIKFQPHSLPKSTPNLQINHINNNNNNLNPPVQPLDLVNSTPTLDSKSMKGFKHNSNGFINLKVPPKLEEKLKNRGLSSNSIPTTEFIKNDMFNNDNQHHQYVKSGQVFKYQSPDSHKEINDKILKAEKSMNYLNGENSSVSSKFITENRKRSGNWSDSDYFSQSSSIDSLTTTSCNSATKVESSLLTQENGKVIRVLSDDFKNPQSYGNVNGNSRTMYSENVTPVVIINLDSSKVSSIDPELSKSDSLDNVIVYDDKFNSKKLKMDKLDTDKKYMMDEKEEEEKENETEEEKVNRVDSKNDHQVSVKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVIQQHGLSMYSNWKICKEAPPDLDMAHYDSRNRSFDYTIAWKKQDVILTHSSQRPTTLVTNNSTDNCFEENDATTALIPTTTTALQSKNKRIKIFDGGFKSNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGINPVPTVVCDDNIDKEAIAKLVAAGGDNVADESSEEEEETDVDESDESGNEEQEAAQSLLSLSQPNSHQIRLPGLTPVGRPSTYPYTLTDFQINKSLNSNVITTTTNTTSTNSSLSIVTSTTLIQSEAVTNRYYFPSSKSLEDCRDSVIRSTKLDNDIEIDTKNTSISRYQSLSSSSLSSSSSLSSSSSSSSSSSPPLSSLSQPMDLTTKTSQLPVQLSSTSSSPSSSPSLAYIKRPILSDILTPVSEPILMQTIVQTMERLPLQGKEWKPDNANGHMLQAYLTERHVMDSKMKQQYRIGTCNSKLDKKQITYSNVNFVDYSHSSVIIDRSCALTNTVSTTGIIYADPNSRMPQMVLTEIALSRKEDNVKVETTCEKQANDIDMFYVKRKLMKITEISKPSFSIGDLKNSERSDMKINVDLSKPCTIDNSLKQNVARKMIVGGPRFRSPSPSRGNLPKPQAEFLQPSSGHTPNYVSVTEDGRSICGICNKIFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLASLQMLAQKLYEKDPSKMSQWDTEVVPHQGTSGGETSSDEGEPISSNTIQQTQLPYIPLMTSDISVSRAYQTSNTLVSGNDINKPVSESHVPNLRFDDNNSSSASLSLPYKCQMCEKILTSVNELRVHCFVEHNIEYKSIQSDCGKENAQNKKIIDLVAVPYDDNSKQKNNDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -