Basic Information

Insect: Chelonus formosanus
Gene Symbol: RREB1
Assembly: GCA_028641665.1
Location: CM054005.1:4229209-4239198[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0035 0.41 11.5 0.2 1 23 38 60 38 60 0.96

2 16 0.00013 0.015 16.0 0.3 1 23 74 96 74 96 0.98

3 16 6.9e-07 7.9e-05 23.2 1.2 1 23 102 125 102 125 0.97

4 16 0.25 29 5.7 0.0 1 23 212 235 212 236 0.92

5 16 0.026 3.1 8.8 2.9 2 23 242 264 242 264 0.94

6 16 0.31 36 5.4 0.3 1 20 319 338 319 340 0.93

7 16 0.15 17 6.4 0.1 1 23 449 471 449 471 0.96

8 16 2.2e-05 0.0025 18.5 0.3 1 23 480 502 480 502 0.98

9 16 0.0058 0.67 10.8 3.9 1 23 508 531 508 531 0.97

10 16 0.0011 0.13 13.1 3.1 1 23 910 933 910 933 0.96

11 16 0.00038 0.044 14.6 0.1 3 23 1183 1203 1181 1203 0.97

12 16 0.22 26 5.9 4.7 1 23 1209 1232 1209 1232 0.97

13 16 0.0061 0.7 10.8 1.3 1 23 1270 1294 1270 1294 0.96

14 16 2.8 3.3e+02 2.4 3.3 1 23 1382 1405 1382 1405 0.89

15 16 0.0086 1 10.3 0.4 2 23 1453 1474 1452 1474 0.94

16 16 0.69 80 4.3 8.0 1 23 1480 1502 1480 1502 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0035	0.41	11.5	0.2	1	23	38	60	38	60	0.96
2	16	0.00013	0.015	16.0	0.3	1	23	74	96	74	96	0.98
3	16	6.9e-07	7.9e-05	23.2	1.2	1	23	102	125	102	125	0.97
4	16	0.25	29	5.7	0.0	1	23	212	235	212	236	0.92
5	16	0.026	3.1	8.8	2.9	2	23	242	264	242	264	0.94
6	16	0.31	36	5.4	0.3	1	20	319	338	319	340	0.93
7	16	0.15	17	6.4	0.1	1	23	449	471	449	471	0.96
8	16	2.2e-05	0.0025	18.5	0.3	1	23	480	502	480	502	0.98
9	16	0.0058	0.67	10.8	3.9	1	23	508	531	508	531	0.97
10	16	0.0011	0.13	13.1	3.1	1	23	910	933	910	933	0.96
11	16	0.00038	0.044	14.6	0.1	3	23	1183	1203	1181	1203	0.97
12	16	0.22	26	5.9	4.7	1	23	1209	1232	1209	1232	0.97
13	16	0.0061	0.7	10.8	1.3	1	23	1270	1294	1270	1294	0.96
14	16	2.8	3.3e+02	2.4	3.3	1	23	1382	1405	1382	1405	0.89
15	16	0.0086	1	10.3	0.4	2	23	1453	1474	1452	1474	0.94
16	16	0.69	80	4.3	8.0	1	23	1480	1502	1480	1502	0.98

Sequence Information

Coding Sequence: ATGGATTGCTCTACAAAGGTGACCATTGACAGTGTGCCGGACTCACGTCACAGCAGTGAAAATCAAACTGATGCAGCTTCATCATCATCGgtCGAGCATTCAGACGGATCTCATCCCTGCCCAGCTTGTCCTTTAGTACTGCCTACATCTCATGAACTAACGAATCACTTACGAGGCCACAATTCTCCACGTAGCACAGACTACAGCGGAGAAGAAGACTACTCTTGTGGAGTTTGCCATAAGGTACTAAGTTCCGCTAGTTCTTTAGACCGGCACGTGCTGGTTCACTCAGGCGAGCGACCATTCAAGTGCAAGTACTGCGACATGGCTTTTACCACCAACGGAAACATGAACAGACACTTAAGAAATGCCCATCGTGAGGTTTCACCTCCCAGTTACACTGATTCTGATGGTAGCAATGACTCAGATCGTCCACGACGTCACGTTGATGagtacaataataatgaaattgccAAGACTAATTCAACTGACATTTCAAACCCTGTGTCGCCATCCAGAGGTAAAAGAAAACGAACTGATGAATCAGATGACTTTGAAGTTAGTAGAAAACataagattttattgaataatgcTAGAAATGACAACAAAGATCTTATCCATGCACAAAATGCATTCGTTTGTCCTGTTTGTGAGACTGTAGAATTTGCAACGGTTGCATTATTAGAAGCTCACCTAGAGAAACATCACCCAGACTACACTGCCGAATGTGAGACATGTAAGagaacttttaaaaatcatcgAGTATTAAATCTTCATCGATATATGGTGCATTTCAATGATAatgcaatgaataataataaaagccTTAAAAATTCAGTGGTTGGTTTCAACGATTTGACTTTTGTTGATTTCTCATCAGATAAATTTCCAGCAATTGCAAGAGCTGTTTGTGAGCAGTCTCTTCATCGTCCAGCGTCAGGAGAAAGCGCAACATTTATGTGTTCAAAATGCCTGCGAGCGTTTCCATGTAAATCAGCATTGGAAGCTCATGAAATGGACTGTGGAAATCCTCAACAAATAGCAAATAAATTAGAAGGAGATAAGATAAAAGGTAATGACTTTTTTGCTGGACTTGATCTTCAAAATAAGGCAGCATTGACTGAAGCAAAAGAAGGAAAAGATTTAGCAGACATTCAGTCGATTATTTCTGTAACATCTGGTCCAATACTTCCAAGATCTGATACTAGCACTCCAGATcatcaagtaaaattaaacTCGACAATAGGATCATCAGGATCGTCAGGAGCGGCATCAGAGTATCACGAAGAAGAAGCGCAAGATGCTTTTGCAGCGGAAGTCAGACGAATGAAATTGAAAGGAGAATTTCCATGTAGATTATGTACTGCAATTTTCCCTAATCTTCGTGCTTTGAAAGGTCATAATCGTGCACATATGGGAGTAGGACCTGGAATGCCATATCCTTGTAATATGTGTCCTTATACGTCAACGGACAAAGCTACTTTGGTGAGACACTTGAGATCCCATAATGGAGATAGGCCCTATGAGTGTGCTTTATGCCATTATGCTTTCACGACTAAAGCTAACTGTGAAAGACACGTGAGAAATCGTCATGGAAAGTTGACTAGAGAAGACATCAAGAGTGTATTAATTTACCATCCAAATGAAGATTCAACTAACGAAAATGTTGACAGGGGATCTCCTAGAGTGATGAGAGAAGATTCGAGAAAATCTCTCAATTACTCAAACGATCGagatgatttttatcaacagaTGCACTATCCAATGGAGATCAAACAAGATGTGGGAATAAGTGAAGAAGCTTTGCGACTTCGGCACATGGGAATTCCTACAATGGTTGCTAATTCAGTAAGTCACTATGATAAAACTGAACTATTCTCTAGACCTCCAGTTGTTCATCCTCTAGAACTGACTCACAGAATCTCCGAAAACTCTggaaatcatgattttatgataaagTCTGAGTATATGAAGATGAATGATCAAGACTCTAGATCTTCCGAAGGTAGCATGTCAATGAATGCTAATCAATCTCTAGTCACCGAAGCCAAATCTGAATCGCACCAAAGAATTCAGGCTAGTCCGATTGacttaaagaaaaatgatgtgACAAACGAGGATGCTCCTTTGGATCTTACAATGGATGTATTAGATCTTAGTAAGAAGTCTAAAGAGACTGGATCAGATTTATCAGCTAATTCTGATCACTCTGAGAGAAGTAAAGACTTTTACGATGCAaccaatcaatttttattaactcaaGCATTATTAAAAGCTGGTCAATCTGGAAATTCATCATCTTTAGAGGCACTATATGCCAATGCTCATCTTTTATACAGAAATTTTGGTGGATTCTCGGCAGGGACTGGAATCTTACCTCcgtatttatttaatcctCATTTATTTGGCCAAGATCTTGCTGTAAGAGATAGATTACAAAAAGAATTAGTTAGAGGATTGCAGTTGACCAGTGGAGGCACATTGGTGGAGCCTTCAATAAGTAATCCAAATTTTTCAAGCTATCCAACCAACAGAGACATGCCTCAACCATCACAAAATGAACAAGGTGATTATTCTAAACTTATAGCATCACAGTCAAGTTCTCGAGTTGTTAGTCCACGAGAAAGAATCGATAGCACCTCAACATCTAATTCTGTCAAAATGGTTATTAGAAATGGAGTTCTAGTCCAGAAACAAAAACAAAGGAGATATAGAACTGAAAGACCATTTACTTGTGAGCATTGTACAGCTAGATTCACGCTTAGAAGTAATATGGAACGACATGTTAAACAACAACATCCACAATACTGGTGCCAGAAACCTCGTGGAGGTCATTCTACTCGTGGTAGACCACCAACTTATCCTCCAACACTCTTACGAAGTCTCAAACGATCCAATCGTGCTCTTCAACAACCTTATCCTAGTATTTTGCCGAAATCTGGTTCTAATGAAAGGGGTAAAGATAGTAAGCATGCAATTTCTGATCAAGTTAAATACGCTATTCTTGCTCAGCAACTAAAAGGTAATCATAATGAGGATAATGATACCGAAGAAGAGttgataattgatgaaaatccCGACAAAAGGTCTGAACTTGATGATGAAGATCGTCCTATCAGTCTATTGAGAGgaaaattagaagaaaacaAAGATAATGGAAAGAAAATGGATGAAGAAAAATCAGAAAGTGATGCTAATCCAGAAGATATGGTATTAAGATGTAAAGATGAACCTATGGACGTTGATGAAATCAAAGAAAATGACAAAGAAAATCCAAAAAATGAAGATGGTGCAGATTTGGCGAGTGTTTCAGAGTTATTAGATAATGCCTCACAACAGTATCAACAGTTTAGGCCACAAGATATGAGTGATGAAGAAGGCTTAGTGGCTTCTACTAGTGACTGTAATAATTCAGGAAGTGATGAAAAGTCTGACTcagtaaattcaaataattccgCTAATTCTGTATCATCAAaactaaagaagaaaaaaaagaaaaagaagaagaagaaatctGCTTATTCTATGGCACCAAATAGAGTAATATGTCCATACTGTCAACGACCTTTCCCTTGGACTTCATCACTCAGGCGACATATTCTTACTCATACTGGTCAGAAGCCTTATCAATGCATGTACTGTTCCTTACTTTTTACAACCAAATCTAACTGCGATCGTCATTTGCTCAGAAAACACAAGACTAATCCTAACAATGTTCAACGTGTTAGGAATTCATCTTCACCAGAAGCTCAAGAAATCCCTGTCAATAATAACACTTTTGCAACAAGAAATGTACCAGAGAGACCTTACAAATGCAATCTCTGTCCCAGTTCCACTTTTTCAACGCTAGGAAACCTAAAGAAACACAAAGCTACCAAACATCCACATGGAGAAAAATCATCTAGACCTGAAAGTCCAATTAGCGAGACTCATTCAGAGCAACATCATAGTCCAGCCCCATGTCCAGAACAAAATGATCgaagtgattatgaaagcCAATCGTCTAGTGTCTCAGAAAATATAGAGACTAACaccaatattgaaaataaaattcctaaTATTCATCCATCAAATATGGATGTCTCTAGACCACGAAGACCTTCTCCAAGATCATCTCCTGGACCATCGCCTAGTGATGTCCCTTTCAAGTGTCATCTCTGTGACAGCGGTTTCTCCGAACGACAAGACTGTCTTGATCACATTAAAGATAATCATGAAGAGTCTTATGAAATGCTTTTGGCGAAAGGTGCCCTTGATATGGACACAGAAAATATGGAGGATCATGCACCTGCCCAACATCTCAGTGATGGAGAAGAAAAACGAGGCAGATTTCCTGACTACAGCAATCGGAAGgttGTTTGTGCCTTCTGCATGCGTAGATTTTGGTCTGCAGAAGATCTTCGACGTCATATGCGTACACATACTGGAGAACGACCATACTCCTGTGATATCTGCTGCAGACGATTCACATTGAAACATAGTATGCTTCGTCATCGTAAAAAGCATGAATCAGTTGACTCTACAATCTACGTAGGAACCAGTGGTGATGAGGAAACAAATCCTATTCAACCACCTACCATTACACCACGAAGCCAACAAGTAATGATGACTTCAGCAAATAttggagaaaataaaatccaaGATAGAATTTCACTACCAACTGTGGCAACTGTAGCAACCGGAGATGCAGCTCCAAGTAGACTTATGAGATTTAATCCATATGAATCACTCACAACACTAACTGGTAAATTAACTAATCAACAAAGTTTTCATTCTGAAACAACTCCTGATACAGAAAATGATTTGATCTCCAACTTACTTGGAATCAGGGATAAGAGCATCATTGACAAAGTTCTCCAAGCATCTGCTGATGACGCGGCAAAATTACTTGGAGTAAACAGAAGTCATGATTAA
Protein Sequence: MDCSTKVTIDSVPDSRHSSENQTDAASSSSVEHSDGSHPCPACPLVLPTSHELTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRNAHREVSPPSYTDSDGSNDSDRPRRHVDEYNNNEIAKTNSTDISNPVSPSRGKRKRTDESDDFEVSRKHKILLNNARNDNKDLIHAQNAFVCPVCETVEFATVALLEAHLEKHHPDYTAECETCKRTFKNHRVLNLHRYMVHFNDNAMNNNKSLKNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGESATFMCSKCLRAFPCKSALEAHEMDCGNPQQIANKLEGDKIKGNDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILPRSDTSTPDHQVKLNSTIGSSGSSGAASEYHEEEAQDAFAAEVRRMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECALCHYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENVDRGSPRVMREDSRKSLNYSNDRDDFYQQMHYPMEIKQDVGISEEALRLRHMGIPTMVANSVSHYDKTELFSRPPVVHPLELTHRISENSGNHDFMIKSEYMKMNDQDSRSSEGSMSMNANQSLVTEAKSESHQRIQASPIDLKKNDVTNEDAPLDLTMDVLDLSKKSKETGSDLSANSDHSERSKDFYDATNQFLLTQALLKAGQSGNSSSLEALYANAHLLYRNFGGFSAGTGILPPYLFNPHLFGQDLAVRDRLQKELVRGLQLTSGGTLVEPSISNPNFSSYPTNRDMPQPSQNEQGDYSKLIASQSSSRVVSPRERIDSTSTSNSVKMVIRNGVLVQKQKQRRYRTERPFTCEHCTARFTLRSNMERHVKQQHPQYWCQKPRGGHSTRGRPPTYPPTLLRSLKRSNRALQQPYPSILPKSGSNERGKDSKHAISDQVKYAILAQQLKGNHNEDNDTEEELIIDENPDKRSELDDEDRPISLLRGKLEENKDNGKKMDEEKSESDANPEDMVLRCKDEPMDVDEIKENDKENPKNEDGADLASVSELLDNASQQYQQFRPQDMSDEEGLVASTSDCNNSGSDEKSDSVNSNNSANSVSSKLKKKKKKKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYQCMYCSLLFTTKSNCDRHLLRKHKTNPNNVQRVRNSSSPEAQEIPVNNNTFATRNVPERPYKCNLCPSSTFSTLGNLKKHKATKHPHGEKSSRPESPISETHSEQHHSPAPCPEQNDRSDYESQSSSVSENIETNTNIENKIPNIHPSNMDVSRPRRPSPRSSPGPSPSDVPFKCHLCDSGFSERQDCLDHIKDNHEESYEMLLAKGALDMDTENMEDHAPAQHLSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPYSCDICCRRFTLKHSMLRHRKKHESVDSTIYVGTSGDEETNPIQPPTITPRSQQVMMTSANIGENKIQDRISLPTVATVATGDAAPSRLMRFNPYESLTTLTGKLTNQQSFHSETTPDTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRSHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00317664;
90% Identity: iTF_00317664;
80% Identity: -