Basic Information

Gene Symbol
ZNF341
Assembly
GCA_028641665.1
Location
CM054005.1:1801883-1809267[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00059 0.069 14.0 7.1 1 23 234 256 234 256 0.99
2 12 4.5e-07 5.2e-05 23.8 0.4 1 23 262 284 262 284 0.98
3 12 0.028 3.3 8.7 1.3 1 23 309 332 309 332 0.96
4 12 0.1 12 6.9 0.4 1 23 338 362 338 362 0.95
5 12 0.00029 0.034 14.9 2.0 1 23 367 389 367 389 0.98
6 12 0.027 3.1 8.7 4.8 1 23 401 425 401 425 0.91
7 12 0.00058 0.068 14.0 2.0 1 23 427 449 427 449 0.98
8 12 5.3e-06 0.00062 20.4 0.4 1 23 455 477 455 477 0.97
9 12 0.00033 0.038 14.7 0.7 1 23 483 505 483 505 0.96
10 12 0.023 2.7 9.0 0.3 5 23 520 538 511 538 0.79
11 12 0.16 19 6.3 2.6 1 19 544 561 544 567 0.75
12 12 0.029 3.4 8.6 0.1 2 19 570 587 569 588 0.95

Sequence Information

Coding Sequence
ATGGCACAATCAATTTTCGACGCTTTATCagGCGTCTCCTTTGATAGCTCTACGGTCCAATCTTTACTTGAATCTCAACATCTCATTTCTGAGATCGAACAaacaacaaTTGATCAAGATGAAGAGGATATTTTCCAATGTGGCAAATGCAAatgtcaatttaatttattacattcatttttgcatcataaaaaaagtcatttaaaaaaaccaCAAACTGTTGATTTAAGTCAgtatttaatgaatgatagTAATCAAGTACAAGTCGATGCTGAAATGCCGTGTCAAAATATTACTCAATTTAATTCCGATCATCCTTCGGAatctgaatttattcaaactgATCAACTCAATGAACCAATTATTCTACAAGAAACTGAAATGTTATTCAGtatgGATCAAGAAAGTGCGAATTATCTATCAGCAGAACCGAATTTTGGTGTTCCAATGATACTTAGTTCAGAAAATCTTGAGAGTTTTGCTCCTCCTTCAAatatttctgataataataatctattaaaaGACGATGCTCAAGAACCATGTAACCAATCTATCGATCCTAGTGAATCTTTATTAGATGATACAaccttcaataaaatttcttcatctGATGATAATCTTTCGCCCGAGAGAAATATAACTAAAGTATTGGAAGAACATGTAGATGATAATGCAACCAGTATTACTCCAAATTTGaagTATAAGTGCAATTATTGCCATaagcaattttcaaaaaaattttactggcAACAACATGAACGATCTCATACAGGTGAAAAACCTTATCAATGTGTTGTATGTGGACGTGCATTCGCACAAAAATCTAATGTTAAGAAACATATGTCGTCACATAAAGTATGGCCTGGAACAGCTATTCATTCTTTACCACCAgagGCTCCGCCGGACGGGAATATTGATCGAACGTATCATTGTCAATTTTGTAAGGAAATATTTGATTCTTACAAAGCTCTCAAGGGTCACCTCATAGTCTCTCATATGACgttaaaagtatataaatgtGTGCAAAGCAGCTGTAGCATGATGTTTGCTGATTTAGATGATTTTCTTGAGCATACACGTAATCATCAACGATCAGAGTATCGTTGTCATGTATGTGGTGAAATGTTTCACACCTTATCAGACCTAGGTCTTCATCAATATGTTCACTCCGTccgaaaacaaaaaacaactgaaaaatattattgttgtaCAACTTgtaaatcatcattttctaaTCTCGAAGCTCTACAACATCATACAGAAACAACAACTCATGATTATGCATGTCCTCATTGCGGTAAAAGTTTTCTCATAGAAAGATTTCTTCGGAGGCACTTGAAAACTCATGTTTCTGCGGCTAGATTTACATGTGAAGATTGTGGAAAAGCTTTTAAAACAGAACAATATCTGgctaatcataaattaattcatagtGAAGAAACTCCATATCTTTGTACACAATGCCCAGCCaagtttaaaagaaaagatcGGCTTGGGCGTCATATGTTAATACATGATTTTACTAAGAGATTAAAATGTCCCTTTCGAGGATACCTTGGATGTATGAGTGAATTTTCTAGAcctgataaattaaaaagacatCTCCTTACACATAGTAATATCAAAAGATATCATTGTACTTATTGTAATCGTGATTTTAATCGTACTCAAGCTTTAAAGCATCAAGAAAGTAATAAACATATTCTTAAATGTGAACTTTGTTTACagatatttaaaaataaggaTCAGCTTGTAACTCACGGTGACTGTGTTCAACCGaatgaatcaaataaaaaacattcaaaccCGCAGTTACCAAGAAAAGCAATTGGAACTTTTAAATCACGTAAACCAACTCCAAAGAGACAAACTAAAGTAATTGGACcaactgaaaaagaaaaaattaaactggATGAAATCGACAAACGATTGTTGttgtCATCTTCAGAGAATATAAAACTAAATGATCCAATTGAagaattagataataatttaacgaaAACAAACTCCAAAGAATTTATTCACCTATCTATTGATACCTTAGTGAGATCTGATTTTACAGAAGAAGaaggagaagaagaaaaaatacaacaaGAACAAGagacatttaaaaatcaaatggaaaaaaatgatacatttcgttcagaaaaatataaagaaggGGTAAAGGAAGTAGAATACGTAAATGAGGAAGACAATTTCGATATGTATGTTACTACTACTcaaaaatctaatttaatcTCATCCACTATTCATCAATCATTGGAAACTAGTCAGCTTGACACAAACCGATTGACTAGTACCCCAAAGACTAATGATCTTAATACAATCAAAACTAGTAATACTGATATCACTCAGACTACGACTAGTTTTAATGAGACGTCTTTCACAacagattataataattgcaCTAGTGATGAAAGTAATGATATGAGTGACAACAATACAGTGACACCTCATTATGAGTTTATGACTACTCATGCAAATACCTATCCTGACAGTATACATAATTACAGTTATGAAGATCAATCAACAACAATATTAGACGTAATAACTACCCATGATTGgcttttaattatatcaaacaGCACAACATTAAGTTCTAATGAAATATCTTATGATTATGAATCTACTACTACATCAACAATTGTAGAAagaactgaaaataattatgtgtCAACTCGTAGAGATGATAGTTCCTTAACAACTGAGAATAAGAGTTATGAAACAACTtctactaaaaatattaacttattaattactgaaaattCTGAGTATTCTACAACTGATTCGGCTAGAAGCATTGATGTATCaacaatagaaaatgataACTATGAAACAACTTCTTCAGAGTATGACGTATCAATAACTCAAGACAATTATGATTATACAACTCCTTTTGGTTCATCTTAtcctaaaaataatgataaattaattattgaagataatgGGTATGATAAAATGTCAACTGAAAATGTTGacaatgaattaaaagtaaCTTCAACAGAAACAAATGAACGATTGATCTCTGATGATGTAACTGAAGGAATTGATCGAAATAAGGATAACAAAGTACATATTTGTGAATCTGGTAGCTGTAAACGTTTAGCAAGTAAAATGTTGTCATATATGAATCATTCAGTGGATCCATGTGAAGATCTGTATGAATATGCTTGCGGTGGTCTGGAAGCAGATCCTCAGATAATAAGCCAAGATTTATCGAAACAAGTTTTCGATCAAATCCAAAgatctttaaaaatacatgTGAATAATACATGGTATCAACCCTTTGTTAAATACTTGGATAGCTGTatcaaatataatgaatatttaatagatgATGAAAAACTTAACGaagtaaaaaaatctgTCGAaaattttggatttttttatacgCAAGAAACATGGCCCAGAGATAGAAATTATTCTGATATTCTTTCACAACTTATTGCTGACAcgattttgaataataaCCCACTACTGTTTGATATTGTACCTGAAGTTCATGAAACTAATtcagaaacatttattttacaaataattccAACAATTGGTAActcgaaatattttcaagactCTATAAAACGAAAATTATATGCTCAGAGCATCAATGATAATGTTACTCAGTGGTTGAATGAAGTGGAgagtttgtttaaaaaaattaaacacttcattattgataaagatattgatataaattttcaaactcttCACCAATATTTCATGagtTATCCATCTTCAACAAGTCACATAAATGAAGTATTTGAGGAGAaagattatataattttaactattaaagAATTACATAGTCAAGCGAGCTTAattgaatggacatcaataatttataaactcaCTGGGATAATATTAGAACCAGATGCCCAgcttcaaatttatttccatcatcaaatatttgatGCTTTAAAGAAATTCGAGCACAGTGATGAATCtcatcaaattcaattttataatgcACTTATTGGACTTTATACTACAAATCTTTATAAACAAATGGTTTTCAATAGAATACATTCACATGAACAATGTTTAACTATCtccatgaaatttttaccaagTCAAAGTTCCTCATTATATATGTCTGCACTTTCCAAAATTCAACTATACTACTTTGaacaatttatagatgatatttttatggaaCTGAAGGAAACACTTAAGTTGAAATTCAGAAAATTACAATGGGCAAGTATCGAAGGTCaagaatatcttttaaaaaagttggctgatattaaattatcattaccaGATACTTTGATTTACAATGGTTCACCAGAACAAttaactgataattttttcaccaatACATtagttttgatgaaaaaatatagagAATCAATATATAGTATTTTAAAGAGTGATCCAAATGATCCTAAAGAATTatggaCATATTTTGCAAGTCCTTTTCAAACTTCTCCTCAAACCATTCATAGTCTGAGTGTCATTCTCATACCTTTTGGAGCCATTGACTGGTTTAGTTTTCAATATAATCGAgaatttgattatttcattttcgcAAGTATTGGAAATCTACTAGCTCGTGAAATAGCACATTTTTTTGATACTaatgGTATGAAATATTGGAATAGAACGCGAATTGGTTCTCCATTTGCTTCTATCAACGATGATTGGACTAAAGCTGCTTATCATGAGTTTATTAATTGTCAacggaatattttatttcatgagcCAATTGAAATTACTGTTCCATTAGATAATCAACAAATTCAATATCAGgTACCTCCATCAACACTAAACGAAAGATTAGCTGATGTTATAGGCATAAAACTAGCTCAGGAAACTTTGAATAGAATACACACATCATATGTTTCAAAATTACTTCCTTGGCTACCTTTGAACActcatcaacttttttttcttgcataCACTCAGGCATATTGTACTAAATCTCAACTTGAAGATTTCAACACTTTCTCGTATGAAACATCTACATTACCTAATCGTATCCGTATATTTGCAGTagcagtaaataataaaaatatcggcCAAGCCTGGAATTGTCCGGAAGGGTCACTAACGCTTCCAATATCTCTTTGTGATGTTTTTCCAGATCTTAATTATGAAAGAGATTTAATGGAAAACGTacaaatttctattaattaa
Protein Sequence
MAQSIFDALSGVSFDSSTVQSLLESQHLISEIEQTTIDQDEEDIFQCGKCKCQFNLLHSFLHHKKSHLKKPQTVDLSQYLMNDSNQVQVDAEMPCQNITQFNSDHPSESEFIQTDQLNEPIILQETEMLFSMDQESANYLSAEPNFGVPMILSSENLESFAPPSNISDNNNLLKDDAQEPCNQSIDPSESLLDDTTFNKISSSDDNLSPERNITKVLEEHVDDNATSITPNLKYKCNYCHKQFSKKFYWQQHERSHTGEKPYQCVVCGRAFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPPDGNIDRTYHCQFCKEIFDSYKALKGHLIVSHMTLKVYKCVQSSCSMMFADLDDFLEHTRNHQRSEYRCHVCGEMFHTLSDLGLHQYVHSVRKQKTTEKYYCCTTCKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHVSAARFTCEDCGKAFKTEQYLANHKLIHSEETPYLCTQCPAKFKRKDRLGRHMLIHDFTKRLKCPFRGYLGCMSEFSRPDKLKRHLLTHSNIKRYHCTYCNRDFNRTQALKHQESNKHILKCELCLQIFKNKDQLVTHGDCVQPNESNKKHSNPQLPRKAIGTFKSRKPTPKRQTKVIGPTEKEKIKLDEIDKRLLLSSSENIKLNDPIEELDNNLTKTNSKEFIHLSIDTLVRSDFTEEEGEEEKIQQEQETFKNQMEKNDTFRSEKYKEGVKEVEYVNEEDNFDMYVTTTQKSNLISSTIHQSLETSQLDTNRLTSTPKTNDLNTIKTSNTDITQTTTSFNETSFTTDYNNCTSDESNDMSDNNTVTPHYEFMTTHANTYPDSIHNYSYEDQSTTILDVITTHDWLLIISNSTTLSSNEISYDYESTTTSTIVERTENNYVSTRRDDSSLTTENKSYETTSTKNINLLITENSEYSTTDSARSIDVSTIENDNYETTSSEYDVSITQDNYDYTTPFGSSYPKNNDKLIIEDNGYDKMSTENVDNELKVTSTETNERLISDDVTEGIDRNKDNKVHICESGSCKRLASKMLSYMNHSVDPCEDLYEYACGGLEADPQIISQDLSKQVFDQIQRSLKIHVNNTWYQPFVKYLDSCIKYNEYLIDDEKLNEVKKSVENFGFFYTQETWPRDRNYSDILSQLIADTILNNNPLLFDIVPEVHETNSETFILQIIPTIGNSKYFQDSIKRKLYAQSINDNVTQWLNEVESLFKKIKHFIIDKDIDINFQTLHQYFMSYPSSTSHINEVFEEKDYIILTIKELHSQASLIEWTSIIYKLTGIILEPDAQLQIYFHHQIFDALKKFEHSDESHQIQFYNALIGLYTTNLYKQMVFNRIHSHEQCLTISMKFLPSQSSSLYMSALSKIQLYYFEQFIDDIFMELKETLKLKFRKLQWASIEGQEYLLKKLADIKLSLPDTLIYNGSPEQLTDNFFTNTLVLMKKYRESIYSILKSDPNDPKELWTYFASPFQTSPQTIHSLSVILIPFGAIDWFSFQYNREFDYFIFASIGNLLAREIAHFFDTNGMKYWNRTRIGSPFASINDDWTKAAYHEFINCQRNILFHEPIEITVPLDNQQIQYQVPPSTLNERLADVIGIKLAQETLNRIHTSYVSKLLPWLPLNTHQLFFLAYTQAYCTKSQLEDFNTFSYETSTLPNRIRIFAVAVNNKNIGQAWNCPEGSLTLPISLCDVFPDLNYERDLMENVQISIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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