Basic Information

Insect: Chelonus formosanus
Gene Symbol: L
Assembly: GCA_028641665.1
Location: CM054006.1:15606874-15612520[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6e-05 0.0031 18.2 0.9 1 23 98 120 98 120 0.98

2 18 0.36 42 5.2 3.9 1 23 126 148 126 148 0.97

3 18 5.6e-07 6.5e-05 23.5 4.1 1 23 154 176 154 176 0.99

4 18 6.1e-05 0.0071 17.1 0.8 1 23 182 204 182 204 0.98

5 18 6.5 7.5e+02 1.2 0.1 9 23 284 299 276 299 0.84

6 18 0.005 0.58 11.1 2.9 1 23 344 367 344 367 0.97

7 18 0.036 4.2 8.3 0.1 3 23 378 399 376 399 0.89

8 18 0.075 8.7 7.3 0.1 3 23 445 465 444 465 0.97

9 18 0.0022 0.25 12.2 0.5 2 23 477 498 476 498 0.97

10 18 0.00036 0.042 14.6 0.2 1 23 507 530 507 530 0.95

11 18 0.051 5.9 7.9 0.6 1 23 535 558 535 558 0.91

12 18 4.5 5.2e+02 1.7 0.0 9 23 590 605 589 605 0.91

13 18 0.061 7.1 7.6 3.9 1 23 631 653 631 653 0.98

14 18 0.0026 0.31 11.9 0.4 1 23 658 681 658 681 0.94

15 18 0.33 38 5.3 0.2 1 23 738 762 738 762 0.92

16 18 7.4e-05 0.0085 16.8 0.7 2 23 777 798 776 799 0.94

17 18 0.033 3.9 8.4 0.1 1 14 808 821 808 831 0.77

18 18 0.0013 0.16 12.8 0.8 1 23 1037 1059 1037 1059 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6e-05	0.0031	18.2	0.9	1	23	98	120	98	120	0.98
2	18	0.36	42	5.2	3.9	1	23	126	148	126	148	0.97
3	18	5.6e-07	6.5e-05	23.5	4.1	1	23	154	176	154	176	0.99
4	18	6.1e-05	0.0071	17.1	0.8	1	23	182	204	182	204	0.98
5	18	6.5	7.5e+02	1.2	0.1	9	23	284	299	276	299	0.84
6	18	0.005	0.58	11.1	2.9	1	23	344	367	344	367	0.97
7	18	0.036	4.2	8.3	0.1	3	23	378	399	376	399	0.89
8	18	0.075	8.7	7.3	0.1	3	23	445	465	444	465	0.97
9	18	0.0022	0.25	12.2	0.5	2	23	477	498	476	498	0.97
10	18	0.00036	0.042	14.6	0.2	1	23	507	530	507	530	0.95
11	18	0.051	5.9	7.9	0.6	1	23	535	558	535	558	0.91
12	18	4.5	5.2e+02	1.7	0.0	9	23	590	605	589	605	0.91
13	18	0.061	7.1	7.6	3.9	1	23	631	653	631	653	0.98
14	18	0.0026	0.31	11.9	0.4	1	23	658	681	658	681	0.94
15	18	0.33	38	5.3	0.2	1	23	738	762	738	762	0.92
16	18	7.4e-05	0.0085	16.8	0.7	2	23	777	798	776	799	0.94
17	18	0.033	3.9	8.4	0.1	1	14	808	821	808	831	0.77
18	18	0.0013	0.16	12.8	0.8	1	23	1037	1059	1037	1059	0.97

Sequence Information

Coding Sequence: atgttgtttaAAGGAAATAGTTCTCGGCTAGAATTtcttatagaaaaaattcaagctCACAAAGAATCTCCATCGCCACTTCCTGAAGAAAAATGTGTTCTAAAATCTAAAGAGGGATTATTGGCTACTGGAAGTTTCTCTTGGAGGAATGAAGATGACAGTCTCACTGGTCAAAGAGGTGGTGGAACTCCATCTTCGTGCACAACTTCCACATCGATGAGTTTCTTATCTGAACCAGAAGCTGATGTTGACATCAAAATAACCACTGatacaaataattcatctgGTCCTTATCCATGtcaattttgtgaaaaatcaTATCCAAGTTTAAGCCAGTTAAAAAAACATGAGCAGaGTCACGGTGATCAGATGCCCTATCGATGCAGCTGGTGTGCACGACTGTTTAAACATAAACGCAGCAGAGATCGACATGTAAAACTGCACACTGGAGACAGAAGATATCGATGTAATCATTGTGAAGCTGCATTTTCTCGAAGtgaCCACTTGAAAATTCATATGAAAACTCATGATAATCAAAAACCCTATCACTGCTCAGAATGCTCTCGAGGTTACAATACAGCAGCAGCTTTAACATCTCATATGCAGTCTCATAAACGTCCAGCATCTTCTAATCAATACTCTAAGGCGTCTGATGAtcgaaagaatttattttggtCGAGTAGAGGATCATCTCCAAGCATAAGCTCCCCTACACCACAAACCCAATCATCATCAATACCCCAAAGATTGTCATCTAATTACTCTCCAGACACTTCAGCAATCGATTTGCCAACAATCTCCTTATTGAGGTCATCCTTAACCCTAGCTTGTATGTATTGTGCTAAAGATACCTTTACAACTATGGAACAACTTCAACTTCATGTTCAAGCAGTTCATGAGACGcttttaaatggaaaaagcCCTTCTACATCGCCTTTGAATATTTCTAATGGCAATAAACGACGAAGAAAACgagaaaaagatgaagatgaatcgaaaaaagggaaaaaaaaaaatttcgaacaACTTTTTTCTTGTAGTGAATGCACAATGAagttttctaaattaatttgcTTAAGAGATCATTTAAAATCAGTTCATCAACAAGAAAATGCTGACTTTGTTATAAATTGCCCGCTTTGCGGGATTCCTTGTTCATCACCCAAAAGTTATGCTGAGCATTATGTTCTCGAACATTgtgaaaatcatcaaaaagttgaaaaaagttCGAAGGAAGTCAATGAATGTGGTAAAATGAATATTGGCAGTCTAAGTAAATTAATTGGCAGTAATTCAAAACCTTTGGATAATTATTCTCCTAGTACGTTGCTTTGTGGCCAATGTGGTGCTGCTTTAAAGGACTTTGAATCATTCCGAGCACATCTAGCACGTCATCTGCAAACTAATCAACAAAAATCAATGACTATTTATTGTCCCAAGTGTGAATTGAGCTTCCAATCACGTCAAGATATGTTGAATCATCTGATGAAGCATTTCTTAGGTCAAGTAATGAAACAATACTCTTGTGAAGCgtgtgatgaatttttttttgacccTGATTCACTCCAGAAACATTTACTTGAGTCGCATGCTCATCACTTGTATAGATGCTCTCTTTGTAGAGAAACGTTTGACTCTAGAGTTGGTATTCAAGTGCATTTTACCGTGAAGCACACGCGAGAATGTAGTGTCTATCGATGTAGTGGTTGTACAAGTTCAAAGAATGGAGAAGAGCCTCGTGAAAATACTTTGGCAGATACTTTGAATGTTTTCAAAACTCCTGCGGAATTAATGGAGCATGTAGCAAGTATTCATGCACCTCAGTCTCATAATGATGAAGTTGCATCACCAGGAAATGCTGTATCTATCCCAGGTGTTATTGGAGAATTTTTTAGGTGCTGTTTCTGTGGTATTTATTGCTCTTCTGACATAGATTTACAACGTCACTTAGAGAGCCATTCCACGTGCCTTTACAGATGCCCAATTTGCCGAGAAGGATTTACTGTTGAATTCTTGCTGGACAAGCATATTGCTCATTCTCATAATATCGTTGAAAATGACATCTTggataatcaaatttattctgtAACTAATTTGGCTGAAGAATCATCtcgattgaaaaaaagatattctcCAGACACAACAAATATGTTAAGTCAATTTGACAATATAAATCGCTCGATTTGCCGTCCGAGTAATCTCTCAAGCCTGTATTATTGTGAATTTTGCGAGGGATTAAATTTTTCGAGCGAACCTGAACTACGAGCTCATAAGAAGCTTGCTCATAAATCTCCAATTAAACTCCAAACTAAACCTACATCTCTCCAAGTTTGCAGTTATTGTGGAGAAACATCACGATCAAGAGGAGAGTTAGAGGCACACACGCGTCTCCATCATGCCCTAAATGATTTAGGGAAGAGGTATAAGTGCAATATatgtgatgaaatattttcatctggTGCTATATTAGCAGAACATAAGCTTGAAAAGCATTGTAAAATTCAGCTAAGTGATGTCTGTATTGTTTGCCGCGGAAGTCTAGGAAGTGAAGCAGATTTTTTGGAGCACGTTCAGAAACATAGTTTGGAGGGCATTGATCCTCAACAAAGACTTGACGGTTTACTTCCTCATATTCCTGCGCACTGCGTCGTCTGCAGACAAACCCTTATCAGTGAATTAGAATGTCAACTCCATGCCAAGTATCACCTGAGATCGTCAGTAGATATTTCAAATTCTAAAAGACATCAAAGCTGCTCTTTGTGTCTTGGAGCACTTGAAAGTGACGACGATGCAATCAGCTTACCTTCTAAATATATTACGACAACTGATCAACAGCTTAAAGTCTGCAAAAGGTGCTACATAAGACATTGGCATGGCTTACCTATCTTGGGCTCACTTTATAACATTGATAACAAGTGGGACGACCAGATTTCTAAAAGCAAAGaagatgaaaagaataatGGATCTGTAAAAAGTAACGAATATGAGACCAAGTCCATCAAGTTTGAAGGAAATGAAGAAATGCATACCACTGGTACACTGCATGAAAAGATACCAGtgacttttgaaaattattcgcATGAGAAAAATAGTCTTGGCGCCCGTCCATATAACTGTCCTTCCTGCTCTCTCAAGTTTTCCTTTAGAGTCGAACTGGAGCATCACCTTGCTATTCACAACGATGAAAAAGCATCTTCTGCAACGAGTGTTTCACAAGAGATATTGGTGGGAAATTCGCGAGCTCTAGAGGACAATCAGTCTTTAGACAATGTCATTGTAAAAGAAGAGATTATTGTTAATCCTGAAGAGGAGGAGATGGAAGAGGAGAAGCAGCAGGAGAGCAGTGGAAATATGCAGTTGGATCTTAAAGAATCTCAAAATCAACGTTACGATGAGAAATCTGTTTTagtgaataataatgttgattaa
Protein Sequence: MLFKGNSSRLEFLIEKIQAHKESPSPLPEEKCVLKSKEGLLATGSFSWRNEDDSLTGQRGGGTPSSCTTSTSMSFLSEPEADVDIKITTDTNNSSGPYPCQFCEKSYPSLSQLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCNHCEAAFSRSDHLKIHMKTHDNQKPYHCSECSRGYNTAAALTSHMQSHKRPASSNQYSKASDDRKNLFWSSRGSSPSISSPTPQTQSSSIPQRLSSNYSPDTSAIDLPTISLLRSSLTLACMYCAKDTFTTMEQLQLHVQAVHETLLNGKSPSTSPLNISNGNKRRRKREKDEDESKKGKKKNFEQLFSCSECTMKFSKLICLRDHLKSVHQQENADFVINCPLCGIPCSSPKSYAEHYVLEHCENHQKVEKSSKEVNECGKMNIGSLSKLIGSNSKPLDNYSPSTLLCGQCGAALKDFESFRAHLARHLQTNQQKSMTIYCPKCELSFQSRQDMLNHLMKHFLGQVMKQYSCEACDEFFFDPDSLQKHLLESHAHHLYRCSLCRETFDSRVGIQVHFTVKHTRECSVYRCSGCTSSKNGEEPRENTLADTLNVFKTPAELMEHVASIHAPQSHNDEVASPGNAVSIPGVIGEFFRCCFCGIYCSSDIDLQRHLESHSTCLYRCPICREGFTVEFLLDKHIAHSHNIVENDILDNQIYSVTNLAEESSRLKKRYSPDTTNMLSQFDNINRSICRPSNLSSLYYCEFCEGLNFSSEPELRAHKKLAHKSPIKLQTKPTSLQVCSYCGETSRSRGELEAHTRLHHALNDLGKRYKCNICDEIFSSGAILAEHKLEKHCKIQLSDVCIVCRGSLGSEADFLEHVQKHSLEGIDPQQRLDGLLPHIPAHCVVCRQTLISELECQLHAKYHLRSSVDISNSKRHQSCSLCLGALESDDDAISLPSKYITTTDQQLKVCKRCYIRHWHGLPILGSLYNIDNKWDDQISKSKEDEKNNGSVKSNEYETKSIKFEGNEEMHTTGTLHEKIPVTFENYSHEKNSLGARPYNCPSCSLKFSFRVELEHHLAIHNDEKASSATSVSQEILVGNSRALEDNQSLDNVIVKEEIIVNPEEEEMEEEKQQESSGNMQLDLKESQNQRYDEKSVLVNNNVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00317649;
90% Identity: iTF_00317649;
80% Identity: -