Basic Information

Insect: Chelonus formosanus
Gene Symbol: salm
Assembly: GCA_028641665.1
Location: CM054004.1:314542-323748[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.3e-06 0.0005 20.7 0.9 1 23 410 432 410 432 0.98

2 9 8.6e-06 0.001 19.7 2.1 1 23 438 460 438 460 0.98

3 9 0.054 6.3 7.8 3.8 2 23 869 890 868 890 0.98

4 9 3.7e-08 4.3e-06 27.2 0.6 1 23 896 918 896 918 0.97

5 9 5.2e-05 0.006 17.3 2.6 1 23 928 950 928 950 0.98

6 9 0.0018 0.21 12.4 1.9 2 23 1262 1283 1261 1283 0.97

7 9 0.031 3.6 8.5 1.0 1 14 1289 1302 1289 1303 0.92

8 9 8.9e-07 0.0001 22.8 2.1 3 23 1528 1548 1526 1548 0.96

9 9 1.7e-07 2e-05 25.1 0.9 1 23 1554 1576 1554 1576 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.3e-06	0.0005	20.7	0.9	1	23	410	432	410	432	0.98
2	9	8.6e-06	0.001	19.7	2.1	1	23	438	460	438	460	0.98
3	9	0.054	6.3	7.8	3.8	2	23	869	890	868	890	0.98
4	9	3.7e-08	4.3e-06	27.2	0.6	1	23	896	918	896	918	0.97
5	9	5.2e-05	0.006	17.3	2.6	1	23	928	950	928	950	0.98
6	9	0.0018	0.21	12.4	1.9	2	23	1262	1283	1261	1283	0.97
7	9	0.031	3.6	8.5	1.0	1	14	1289	1302	1289	1303	0.92
8	9	8.9e-07	0.0001	22.8	2.1	3	23	1528	1548	1526	1548	0.96
9	9	1.7e-07	2e-05	25.1	0.9	1	23	1554	1576	1554	1576	0.98

Sequence Information

Coding Sequence: ATGCAACTTATGAGATGGAGTATTACTACTAGACTTGAAAATCGTGGCATTAAACGACGAGACTCGAAAAATTGGCAACCTATTGATAACAGTATTAACGCGTCGGGATTTTCATGCCCTCGATATTCtgAGGATGACAATGACACGACGTCAGAGGGTGAAGACAGCAGTGGTGGAGGAGTTGGTGGTGAAGAAGCAGTAGATTTGACATCAAATCGATCTCAtcaagaagatgaagatgaacgTGAACCTGAAGAATTACCGATGGAAGAAGACGAGGAGGAGGCAGTGGATGAGCAAGAAGATCAGGAGGATGACGATGAAGGTTCTCGAAAGCAAATGAGGAATCGTCAAGATGcagaaaataataacagtTTCATTGAGAGTGGCACGTCAAGCGGGATATTCACCACGCCTGCAGGCACTAGTCATGTCACTCTCGAAGCATTACAAAATACCAAGGTCGCAGTGGCACAATTTGCAGCGACTGCATTGGCTGGTGGTGCTGATAGTGAAGCGGCTTTGCAAGATCTTGCTCTTCTTCAGAGCACCCTTTATACTCTCCAACATCAGCAGGTATTCCAGTTACAATTGATTAGCCAACTGCAACAGCAGCTGTCTATCACTCAAGGAGCAAGTACTGGAAGTCAAACGACTGCTCCAGAACCAGTGACTGAGACTAAAGAAGTGACTACGCCTCCATCTCCCTTAATTCATCCCAAGTCTTTATCCAGTCTCACATCACCACCTTCCTCACGACCGTCAAGCCATCAAGCATCGTCACCTTTAACTGTACCAAGCATCACTCAAGAACGTCCAGTAGGATCAAGTAGTACATCACCTGTAAGTCTGAATATTCCTACGGTAACAGGAATTATTTCGACTGGAACTTCAACCGCCTCAACTAATGTTAACACCAGCACTACAGTCAGTAATACTAGTACAAGTGTTCAGACAGCTTTATCTCATCAAATGCCATCACTTTGCTCCATCAGCTCATCCCTTGCTTCGTCCATCATTACCAACAATGATCCGGTGCCGCTTAACGAGCCAAATACTCTAGAGATGCTACAAAAAAGAGCACAAGAAGTATTGGATAATGCAAGTCAAGGTCTCCTTGCAAATAACCTTGCAGATGAACTTGCATTTAGAAGTGGCAAGGGTGGCTCACGTCTCTCTCCCTACGATTCAAAGTCTGCAAGTGGTCGTGGCGAGCCCTTCTTCAAGCATCGGTGTCGGTATTGCGGCAAAGTCTTCGGCAGCGATTCAGCCCTTCAGATCCACATAAGATCCCACACAGGTGAGCGTCCCTTTAAGTGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCGCACGTAAAGATGAATCCAAATCCTGTGCCTGAACACCTCGACAAGTACCATCCTCCTCTGCTCCAGCAGCTCGCGGCTTCCGGTCAGAGACCCCTCCCGTCTCCGCCGCCCCCATCGGCACCGCCTACCGCGGGATCGGTGCCGTCGTCGCATCACGCTTCGTTTCATCCGGCATCGGCCCACGGTTTTCTCCCACCTCAACCTCCTCTGCCCTTAAGTCTTGCCCTTCCAGCCGTCGCTGCTGCAGCAGCCGCGGCTGGCATGCCAACCCTTTACCATCGGGGATCCATCGTTAGTCATCGCGATGATCAGGATATACCAGAAAATCTGAGCAAATCAACTAACACCACATCGTCGATAGTCTCTAATTCCACAACAACAATCACTGTAACGACTACGTCTGCGACGACATCAACAACACCACCTATGTCTATGCATTCACCAAGATCACCTGCCTCGATTCCAACAACGACCAGCAACATTATCTTTTCCAATTCACATCATTCCTGTCAAGATACTCAACGAGCAGAGCTGAAACGAGAACAACCATCACCTTTTCCTAATCGACCAAGTAGTCGGGGTATAGACGAGACAATAACACCGAAGAAGGAGCCAGAAGAACCAGTTGATGAACTTGCAGAAGATGAAACTGATGAATTTGAACCGCCATCTCCAAGACGATACTTGGAACGTTCTTCGCCAATACCTAATAATCCAATGATCTCACAGAATCAACCTTATGAGGATTGCAGTATGGATAGTAAAACTAGTGGACGACTGGATGCTGATGGAGAGATGGAAGGAGATGAAGAAATGGAGGAACAACCAGAAAATCTTTCCAGTAGAGGTACCAATAGTCGTTTGTGCCAACAGACAATAAACTATCCTGGTGCCTCGCCGGCAAGTAGCACCGCCAGTAGTGGAAGTCTTCAAACCTCCTTTGCAGGACTTCTTTTTCCTTCTGCCCCACCCAGTCATCAACAGTCATTGCCTCATATTCCATCATCCAATACTACAACAGCATGTACTAATACTAGTGAAATGATGGTTGATCCTGCAAAAGATCCTGCtatttattccaatttatTACCTCGTCCTGGAAGTAATGATAATTCTTGGGAGAGTCTTattgaaattacaaaaaccTCAGAAACATCCAAGCTTCAACAGCTTGTTGACAATATTGAGCATAAGCTCACTGATCCAAATCAGTGCGTCATATGTCATCGAGTACTGTCGTGTAAAAGTGCTCTTCAGATGCACTACAGAACGCACACAGGCGAACGGCCGTTCAAGTGCAAAATTTGCGGGCGTGCATTTACCACAAAGGGTAATTTGAAGACACATATGGGTGTACATCGAGCTAAACCACCACTCCGAGTACTTCACCAATGTCCAGTGTGTCATAAAAAGTTCACCAATGCACTGGTACTCCAACAACACATACGACTTCATACAGGAGAGCCTACAGATCTCAGTCCGGAACAAATTCAAGCAGCTGAAGTTAATGAATTCCCACCAGGATATCCATCACATCCACTGGCATCATTTCTTCCGCAAGGTTTCCCGGGACTTCATCCTGGTCCAGGCACATTTCCACTGGGGTTTTCCCCTTCTCGACATCCAGCATTAGAACGACATATGCAAGACAATGAAATGGACATGAAAGATATGAGCATTCAGCAGAAAAATCTTCATATTCAACATCAACTCCAACAACGACGATATTTAGATGAGCAATCAGAAGATATGGAAGACCAAGAAGACGATGACGAAGACCATAGGGAAGATGATGAACGATGCGAAGATTTACGAGATCATCagaaacaaaatgaaatagaagaaGACATTGATAATGAACGAGAAGAAAAAGAACCACCAATAACATGTTTTTCAACTTCTCTTGCAGCACTCGAAAATCAAGTAAGAACAATAACGACAATAGCTTCTGGAGGCTTAATTACTCCAGGTGGTTCTACATCACCTCTAGATCGATATAACAGCAGTGAAAAAAGCACCAGTCCACCAAGCTCAATAGCAGGTGCTCCACTTGATCTAACGCCTCGTGCTTCCTCCACCCCCGGTTCAGTAGTCTCTGCATCgacaccaccaccaccactaCCACCACCGCCTCTGCATCATCCACATCCTTTCGGGATGTTTGCAGGCCTCTTGCAAGCAGTatcctcatcatcatcaccttCAATCAACAACATTCAAGCTGCTACCAGTGCAATTAACAGCGTTGCATCGATAAATCCAGTTAGTCCAGGTGGCAATAATGGCGGAGCACTAGCTTCTCTAACGACGTCCGCTGTACTTGCCGCATCCTCGACCTACAATCCGCTCGGCCTCGCTGTTGGAGGGCCAGCAGTACGTGGCAACACAACGTGTAATATCTGCTACAAAACATTTGCATGTAACTCCGCACTGGAGATACACTATCGAAGTCACACGAAGGAGCGGCCATTCAAGTGCAGCATTTGTGACAGAGGCTTCTCCACCAAAAATGACGACTCGGTAATAAGAGCGTGTAACTGCTTGGACTCCCGAGATGTCGTAACCCCGCAAGATGAACCAGTTCCTAAACCAAAACGCAAACGACGGAGGGCCGAGGAGAAGAAGACCCGGGGGCGGTCAGGAAGCGGAGGGCGGTGGGCTCTATCGTCTTCGTGTCCTGCTGTCCACTTGCCCCCGCTGATGTCTCCCGCCCTCGGACTTCTCACCTCGGACCACGTCTTCTTGgGCAATATGAAGCAACACATGTTAACCCACAAGATTCGAGATATGCCAGCACACTTATTCAGTGATGGTAAGCAACCTGGACAACCTCCACGAGAGCAACAACCACCACCACCTCAATCACAACAATCTCAACAACAACTCTCACCATCATCACAGCAActacaacagcaacaacaacaacaacaaccaCCACCACAACCACCATCACAGCCACCAATTCAACAGCAGCTTCAACAGCATCAGGATCCAGAAAATTCACAAAATTCAATGAGTACTGATGAGTCAAGTCTTCCGCCTCCACCACCACCTCCTCCTCCACCACCGCCACTTCCACCTTCGTTGCCTCCGTCTCCACTAGAATCACCGGTGCCGGTAAAACGATCACCACCGGAAGGTGATCTTCCAGCACCAAAAAGACCCAGCATGTCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCCTCGGCGCTCCAGATCCATATGAGAACGCATACGGGTGACAAGCCCTTCCGGTGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATTTAAAGGTGCACATGGGGACTCATATGTGGACAAACGGAGCTTCTCGACGCGGACGACGAATGTCACTGGACCTACCACCACTACCCATCACACCCAAGGATTCGGAGTTTCTTCAGCGTCGACCGGATCTCTTTTATCCATATCTACCCGCGCCGTTCCTTAACGGAGTTCAGCAAAAACTGAACGAGATATCGGTGATTCAAAGTAACAACGGACTGCCTGGAACGCACCCAGTGAATGCCAGCAAATATGCAGGACTTTTTGGAACAATTTACGGTGGAACTGCTGGGGGATTTCCAATGGAGAAATCACCAATGGCAGCAAGTAATGGTCCTTTGAGTGATGGAAAACCAGTGATACCTTCAGGTTCAATGCTGTTCCAAACGCCATCACCATCACACTCACCTGGAACACCGTCTTCCAATACTGGCAATCAAAACTCTGCTAGTGTTCCAGCATGGAGTGGTGATAATATTCAGCATCACTTTGAACGAGAAGGTCCGTCCAGATcggaaaataattctacaccACCAACAGCACGTTTGCCAACAACTTCAGCTCCAAGAGGTGAAGGTTTAGCAGCGTGA
Protein Sequence: MQLMRWSITTRLENRGIKRRDSKNWQPIDNSINASGFSCPRYSEDDNDTTSEGEDSSGGGVGGEEAVDLTSNRSHQEDEDEREPEELPMEEDEEEAVDEQEDQEDDDEGSRKQMRNRQDAENNNSFIESGTSSGIFTTPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITQGASTGSQTTAPEPVTETKEVTTPPSPLIHPKSLSSLTSPPSSRPSSHQASSPLTVPSITQERPVGSSSTSPVSLNIPTVTGIISTGTSTASTNVNTSTTVSNTSTSVQTALSHQMPSLCSISSSLASSIITNNDPVPLNEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGGSRLSPYDSKSASGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPSAPPTAGSVPSSHHASFHPASAHGFLPPQPPLPLSLALPAVAAAAAAAGMPTLYHRGSIVSHRDDQDIPENLSKSTNTTSSIVSNSTTTITVTTTSATTSTTPPMSMHSPRSPASIPTTTSNIIFSNSHHSCQDTQRAELKREQPSPFPNRPSSRGIDETITPKKEPEEPVDELAEDETDEFEPPSPRRYLERSSPIPNNPMISQNQPYEDCSMDSKTSGRLDADGEMEGDEEMEEQPENLSSRGTNSRLCQQTINYPGASPASSTASSGSLQTSFAGLLFPSAPPSHQQSLPHIPSSNTTTACTNTSEMMVDPAKDPAIYSNLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPSHPLASFLPQGFPGLHPGPGTFPLGFSPSRHPALERHMQDNEMDMKDMSIQQKNLHIQHQLQQRRYLDEQSEDMEDQEDDDEDHREDDERCEDLRDHQKQNEIEEDIDNEREEKEPPITCFSTSLAALENQVRTITTIASGGLITPGGSTSPLDRYNSSEKSTSPPSSIAGAPLDLTPRASSTPGSVVSASTPPPPLPPPPLHHPHPFGMFAGLLQAVSSSSSPSINNIQAATSAINSVASINPVSPGGNNGGALASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKNDDSVIRACNCLDSRDVVTPQDEPVPKPKRKRRRAEEKKTRGRSGSGGRWALSSSCPAVHLPPLMSPALGLLTSDHVFLGNMKQHMLTHKIRDMPAHLFSDGKQPGQPPREQQPPPPQSQQSQQQLSPSSQQLQQQQQQQQPPPQPPSQPPIQQQLQQHQDPENSQNSMSTDESSLPPPPPPPPPPPPLPPSLPPSPLESPVPVKRSPPEGDLPAPKRPSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPGTHPVNASKYAGLFGTIYGGTAGGFPMEKSPMAASNGPLSDGKPVIPSGSMLFQTPSPSHSPGTPSSNTGNQNSASVPAWSGDNIQHHFEREGPSRSENNSTPPTARLPTTSAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00317647;
90% Identity: iTF_00317647;
80% Identity: -