Basic Information

Insect: Chelonus formosanus
Gene Symbol: -
Assembly: GCA_028641665.1
Location: CM054005.1:2710582-2713079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00023 0.027 15.2 3.9 1 23 229 251 229 251 0.98

2 11 0.02 2.4 9.1 11.8 1 23 257 279 257 279 0.95

3 11 5.4e-05 0.0062 17.2 6.6 1 23 285 307 285 307 0.99

4 11 0.00037 0.043 14.6 1.6 1 23 313 335 313 335 0.95

5 11 1.6e-06 0.00018 22.1 2.3 1 23 341 363 341 363 0.97

6 11 3.6e-05 0.0041 17.8 0.3 1 23 369 391 369 391 0.97

7 11 7.1e-05 0.0082 16.9 1.6 1 23 396 418 396 418 0.97

8 11 0.00099 0.12 13.3 0.1 1 23 424 446 424 446 0.97

9 11 2.6e-05 0.003 18.2 0.1 2 23 456 477 455 477 0.97

10 11 4.8e-06 0.00055 20.5 2.5 3 23 544 564 542 564 0.96

11 11 2.3e-05 0.0027 18.4 4.6 1 23 574 596 574 596 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00023	0.027	15.2	3.9	1	23	229	251	229	251	0.98
2	11	0.02	2.4	9.1	11.8	1	23	257	279	257	279	0.95
3	11	5.4e-05	0.0062	17.2	6.6	1	23	285	307	285	307	0.99
4	11	0.00037	0.043	14.6	1.6	1	23	313	335	313	335	0.95
5	11	1.6e-06	0.00018	22.1	2.3	1	23	341	363	341	363	0.97
6	11	3.6e-05	0.0041	17.8	0.3	1	23	369	391	369	391	0.97
7	11	7.1e-05	0.0082	16.9	1.6	1	23	396	418	396	418	0.97
8	11	0.00099	0.12	13.3	0.1	1	23	424	446	424	446	0.97
9	11	2.6e-05	0.003	18.2	0.1	2	23	456	477	455	477	0.97
10	11	4.8e-06	0.00055	20.5	2.5	3	23	544	564	542	564	0.96
11	11	2.3e-05	0.0027	18.4	4.6	1	23	574	596	574	596	0.97

Sequence Information

Coding Sequence: ATGTGCACAACCCCTGGCAATGCCGGCACAGGTTTTGGGTATGCGTGGTCATTTGGTCCTGGTACAGAAACCAGGGATAATGCACAAGGGGAATTGACAGCAAACATTAACTACGCTGTCAACAATAATCAAGATCAAGGTACCAGTCAAAAGATTCAGATTGATGTTAAACCAGCTAAAATCATCAATAGCACAGGAAGAAGGGCGGTGTTTACAATGAATGAGAGCTGTCAGCAAACACCAACATCTCATGGCCATACTGGAGCTCATAATCAAACGCATGTCACTCATGCACGAGTGAAAAAACATTCTGACGTCTTCACGCTTACCTGCGATAAGGGTGGATGTAACTGTGATGCAGCACACTCGACACCGGCTTCTACAACTCTCTTTCCTAATGCTTTAGTTTTTACTACTACGGGTGATAAACATGCCATGAGCAAACCTTTTATGACACCAATCGGGCCGCTTCAACTTACTGCTGAAGAGtgcaatgaaatattgatgaaaagaGCTGCGGCTGCTTCGAATCAAGCTAGCGCTAACAATGTGTCTACGAGTCAGACTGATACAACAGCACACTTTGGCCACGTGCTCACTCACGTCAATACCACACAGATAGATACTAAGATTAAACAACAGCAGGACATGGGAAGTCAAGCACGCGTGCCAAAGGAGAGGCCTTATTCATGCTCTGAGTGTGGTAAATCTTTTCTCCTTAAACACCATCTTACTACTCATGCGAGGGTTCATACAGGAGAAAGACCTCACATCTGTGTCCATTGTGGCAAAAGTTTTGCGCACAAACATTGTCTACATACTCACCTCTTGCTCCATAGCGCCGAGAGACCATACCAGTGTCGGGAATGTAAAAAATCCTTTACTCTGAAGCATCATCTGGTTACGCACACACGTGTACACACGAGAGAACGGCCGTTTGTTTGTCAAGAGTGTGGTAGAGCTTTCCCGCTAAAACGTCATCTAGTTACACATAGCAAGTTTCATTCAGGAGAGCGACCATTTGTTTGTTCTGAATGTGGCGAATCTTTTTCTCAAAAAGACCACCTTACTATGCATTCGCGCTTCCATGGCAGTCTCCATCCTTTTGTGTGCTCTGATTGTGGGGCAACCTTCCAGAGAAAATTCGAGCTTGTCAATCACGGTCGTCTCCATGGTCGAGTTCCACACTCTTGTACTGTATGTGGAAAAGAGTTCCTGCAAAAAAGAACTTTGCTGGCTCACATGCGTCTTCATACTGGAGAAACTCCATTTGCATGTACTGTATGTGGTGATGCTTTTGCAAGGAAAGTAGATCTGGTGACTCATTCCAAGATGCACAACACTATCATTGATGACAAAACCATTACGTGcagGGAATGTGGCTTGGACTTTTCTAATCAGGAAGCACTTACTTTACATTTGAGGTTACACGGTGGTGACAGGACTCTTGTGACGGATTTGTGTGGATTGGCAGCAGCTTTTCAACAAACACCAGGTCATTTTCTATCACAAAATACCACTGGAACTCAAcatataaatgGACCAACAATCAATAATCCTGGAGTGAGTCACATGCAATGTGCAACCCAAACATCACCCCCAGCTGGACCGAAACCCAAACCTCACTTGTGTCCTGATTGTGGTCGTGGATTCGCTCAGAAACACGGGCTATCTCAACATCAACGACGTCATACTGATGGTAGTTGTCATATAAGATCACATGTCTGTGATAAATGCGGCAAAGCTTTCTTCCaaaagaatcatttattattacatcaaCGTCAACATATGGATCCACCTCCAAGTATATTAAGACAACAACAAAGATTAGCTGCTCAAGCTGCTGCTCAAGCTCAGCAACAAAACCAACAACAAAATCAAGTCCAACAACAATCGCAACAGCCTCAACAACAATCGCAACAGCAACAAAATCAGGCTCAACAACAAGCCCAGCAAGTGCAGCAACAAGTGCAACAGGCACAGCAAGTTCAACAATCACAACAAAATCAACAACAAGTGCAAACAACTCAACAACAACAAGTGCAACAGCAACAGCAGCAGGCCCAACAGCAAGTTCAACAACAAAATCAGCAGCAGGCCCAACAACAAGTGCAACAACAATCTCAACAATCACAACAAACGTGTAATGTTGATACTAAAACTATTCAGTTGCAAGCAATACAACAACAAGTTCAACAGCAAGTTCAACAGCAGGTTcaacatcaacaacaacagcagcagcaacagcaacagcagcagcaacaacaacagcagcaaGCGCAACAACAGGTGTGCTCAGTGGACGCAAAAGCAATACAATTGAATGTCACTATgtga
Protein Sequence: MCTTPGNAGTGFGYAWSFGPGTETRDNAQGELTANINYAVNNNQDQGTSQKIQIDVKPAKIINSTGRRAVFTMNESCQQTPTSHGHTGAHNQTHVTHARVKKHSDVFTLTCDKGGCNCDAAHSTPASTTLFPNALVFTTTGDKHAMSKPFMTPIGPLQLTAEECNEILMKRAAAASNQASANNVSTSQTDTTAHFGHVLTHVNTTQIDTKIKQQQDMGSQARVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCSECGESFSQKDHLTMHSRFHGSLHPFVCSDCGATFQRKFELVNHGRLHGRVPHSCTVCGKEFLQKRTLLAHMRLHTGETPFACTVCGDAFARKVDLVTHSKMHNTIIDDKTITCRECGLDFSNQEALTLHLRLHGGDRTLVTDLCGLAAAFQQTPGHFLSQNTTGTQHINGPTINNPGVSHMQCATQTSPPAGPKPKPHLCPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRLAAQAAAQAQQQNQQQNQVQQQSQQPQQQSQQQQNQAQQQAQQVQQQVQQAQQVQQSQQNQQQVQTTQQQQVQQQQQQAQQQVQQQNQQQAQQQVQQQSQQSQQTCNVDTKTIQLQAIQQQVQQQVQQQVQHQQQQQQQQQQQQQQQQQQAQQQVCSVDAKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131010;
90% Identity: iTF_00317626;
80% Identity: -