Basic Information

Insect: Chelonus formosanus
Gene Symbol: -
Assembly: GCA_028641665.1
Location: CM054001.1:3843734-3847107[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1e-05 0.0025 18.5 0.7 1 23 150 172 150 172 0.95

2 15 0.00079 0.091 13.6 1.1 3 23 180 200 179 200 0.99

3 15 6.8e-05 0.0078 16.9 0.0 1 23 325 347 325 347 0.98

4 15 0.5 58 4.8 0.1 2 23 354 376 353 376 0.95

5 15 0.00018 0.021 15.6 1.9 1 23 403 425 403 425 0.98

6 15 1.4 1.7e+02 3.3 0.0 1 23 441 463 441 463 0.86

7 15 0.44 51 4.9 0.4 2 23 470 492 470 492 0.94

8 15 0.0033 0.38 11.6 3.0 2 19 500 517 500 521 0.95

9 15 0.00016 0.019 15.7 3.5 3 23 529 549 527 549 0.97

10 15 0.012 1.4 9.9 0.1 3 23 556 576 555 576 0.97

11 15 6.8e-06 0.00079 20.1 0.4 1 23 585 607 585 607 0.98

12 15 0.003 0.34 11.8 0.2 3 23 615 635 613 635 0.97

13 15 0.0026 0.3 11.9 0.2 3 23 643 663 641 664 0.94

14 15 0.063 7.3 7.6 0.0 1 23 678 700 678 700 0.92

15 15 0.0048 0.56 11.1 0.0 1 20 1077 1096 1077 1099 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1e-05	0.0025	18.5	0.7	1	23	150	172	150	172	0.95
2	15	0.00079	0.091	13.6	1.1	3	23	180	200	179	200	0.99
3	15	6.8e-05	0.0078	16.9	0.0	1	23	325	347	325	347	0.98
4	15	0.5	58	4.8	0.1	2	23	354	376	353	376	0.95
5	15	0.00018	0.021	15.6	1.9	1	23	403	425	403	425	0.98
6	15	1.4	1.7e+02	3.3	0.0	1	23	441	463	441	463	0.86
7	15	0.44	51	4.9	0.4	2	23	470	492	470	492	0.94
8	15	0.0033	0.38	11.6	3.0	2	19	500	517	500	521	0.95
9	15	0.00016	0.019	15.7	3.5	3	23	529	549	527	549	0.97
10	15	0.012	1.4	9.9	0.1	3	23	556	576	555	576	0.97
11	15	6.8e-06	0.00079	20.1	0.4	1	23	585	607	585	607	0.98
12	15	0.003	0.34	11.8	0.2	3	23	615	635	613	635	0.97
13	15	0.0026	0.3	11.9	0.2	3	23	643	663	641	664	0.94
14	15	0.063	7.3	7.6	0.0	1	23	678	700	678	700	0.92
15	15	0.0048	0.56	11.1	0.0	1	20	1077	1096	1077	1099	0.94

Sequence Information

Coding Sequence: ATGGATGTTTCCGGCGATTTGACTCTTCAGTGGGTTGAAGAGGTAGGAAATGTTATTCACGAAGAAGTAATATGTGGATTAGAAGCTGATCTTGCCCAAGAAGGTGAAGTTATTGGAGCTTGTGAAGAAGTATGTGTCGAAGAAACTGTTCAGACTTCACCTGATACCAATTCTTCATCTCATAATCTTCCTCCGGATACTGAAATATTAATGGTACCACAATCAAGTGACATGGAATCAATTTATATCGTTCCACAAGATCAAGGACATGACTATCTTAATATTCAAGTAACAGAGGAAGTAATTAGTGATAATTGGGATCGATCAGGTCCAGATGATGGCGTTGAAATTCCAGAAACAAAAGTGTcacatgataatttattggaatatgATGATATGGAAATACCTTTACCAATCGATCAAGATTCTTACACTAATACACGACCATATCCCTGTGATTTTTGTAGTCGAAGATTTCGAAAAAAAGCTAATCTCATGAATCACATGGTTGCTCATCAAACTGATCGACCACATGGTTGTAATCTTTGTGGCGCCCGTTATGTTCGAAAATGTGACTTAATGAATCACTTGAAAATACATGCTTACGCTCCATCACGGGATGGTCTAgaagaagaattaaatgatgaagacTCTTTGGTTCCCGATGAAGAAGAAACTGCAAAAGGTCGTCGTAAAAAAGCTCAGCTTTCAACATCAGCAAGGAAGCGTAAAAATACAACCGGAATGATGAAACGAAATATCAGTCTTGATGGTTTAACTAAACTAGATGGTAATAAATTTAGTTCAAAATCTTATGAATATGTCGTCGAAGATATGCGTTTATTAGAAGATGACACAGAGCAAGAATCAGATGTACGGGGTGATAGTATTGCTTCGAGTTCAAGATGGAATGATTCAATGATTACAGAATCTCATGCTCCACGATGGCCAATTACTGATCCTACAAAACCTTATGTATGCCAATATTGTGGAGTTGGTTTTGCTCGAGAAAAAGCTCTAGCTTCACACGCGCGAATTCATGGAGGTGACAGTCCACTAGAATGTACAAATTGTGGTGACATGTTTTGGGATGCTAATGTTCTTCGTGAACACGTACGAACGAAACATGGTATTATCTCATCTGATGGAATAAATGTAGAGTACGAAACCAATGAATCCTTTACCAGTGATGATAGAGTTGGTGAATTTTATTGCGATACGTGTGGTGTCCCATTTCACCGAATGGATCTTCTTAAACGTCATCGAAAAATTCACATTAAACAGGAAACTGATGAATCAATAGAAGAATCAAGTCATCATCATGTTTGCAATGTTTGTGGTGAGTGGTTTGAAGAAGCTCTTGCTCTTCTTGCACACGCTGAGTTGCATGCTCGATCACCCACTAGACGTTGTTTATTGTGTGGAGAACGGTGTAGAGATGATGCCGAAGTTGCTGAACATGTTCGTCAAAATCATGCTGAAGATGCACCTCCTAATACCTGCACGCTTTGCGGTAAAACGTGTAAAGATAAACgaagtttattaaaacattcatGGGTtcataatgttgataaaaccTTCGGTTGTACTAAATGTGGAAAACGTTTTCATAGTAAAGCAAGACTTCGACGACATATGGTATCACATCGTAATAAAATGGTTGCTTGTGATGAATGTGGCGAAGAATTTCCCGATGGTCGTGCTCTTGTTAGTCATCGTCATTCacataataaagaattagGTGGAAGAACTTTTCCTTGTCGAGAATGTGGTAAAACTTTTGGTAGTCGCAGTTCACAACAAATTCACATACGCATTCATACTGGCGAAAGGCCGTATGGCTGTCGATTTTGTTGGAAAGCTTTTGCTGATGGTGGTACTTTAAGAAAGCATGAAAGAATACATACCGGTGAAAAACCATACGGATGTGCTATATGTCCTCGAGCTTTCAATCAACGAGTAGTACTCAGAGAACATGTACGTGCTCATCATTCAGGTCCTGATCCAAAATGTCATGGAAGTTTAACTCCATATCTTTGTAAAGTATGTGGTGATTCGTTCGCCACATCTGAAGAAATTGTTTTACACATAGTTCAACATTGCGATGACAATACAGCACTTCGTCGACAACCACAAGTGGGACCAAGAAAATATAAACGAAGGCGTAAAATTAAAGCTCATGAATCATCAATACCAGTTCTTGTTTCacaatcaaatgaaaattttaatagtataGAAGGTTCAGAGTCTGATGACAATACAAAAAGAAAACTTGGTAagagaaataaacaaaatcgcTCGAATGTTGAAGAAGGATAtcaaaatgtattgaaaagcTTCGAAAGTTCAttgcaaaatattaattcaatagtaAATTCCAAAGCTTTAAGTACAGCTAAATCAAAAATCtccaagaaaaagataaaaaaagaagagaaaaagacTCCAGAAACGCCATCTCAAGCTCCACCTGGTCGGCCGAAAATGATTCATACTCAAAAAACTCGTGTTCCTGTAGAGTTAGGTAGTGATGGTGTCAAAAAAggacaaaaaacaaaaactatGGTTACAAGAACACCTAAAGTAATACCTGGCGAACCAAAGCTTGGAATATTTCCAGGAGGCGAAAGAAATCGTCCAAGAACTAAAAATGTGAGTTATCATGTAGAAGGTAAATTCCAAGTAACTCCAGCAACTTTTCCACGACCGAAAGGTTCATCAGAAATCGCACCATTAACCCAATCATTTTCcgatgtaaaaataaaaacggaATATAATGCAGTAGCGAGCAAATCAAGTAATTATGATAGTCAAAATggtaatattgaaaatacgAAAACTCTtgatgataagaaaaaatctcCTATTAAAGGAAGAACATTAAGAcgaacaaaaatgaatattaaacaaGAACCAGaagaaatattaacaaatgaaGTAGTGCAAAATAACGAAAATGAAGAGCCAGgaacatcaaatatttttaatcaacctGAAATCGATGGTAACAATATGGAAGTTGCATTTGAAGCGCATGTTATTGCAGATGAAGTAACAGAAAACGAAAGTATTCTCCCTGATTTAGATAACGTAAATCATACAGAAGAAGTGTcgaatagtaataaaatgaaattgagtGTTAAAGTAGAGTCAACATTACAACATGAACATCTTCTTCAAAATGTATCACAAGATATACCAGAAACTATCATACCTGATGCTGTCGAGTATACGTGTGAAATGTGCTCAGCTGTATTTGCAACTCGTGCAGAGCTTTTAATTCATGTACCAAtacatatttga
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEADLAQEGEVIGACEEVCVEETVQTSPDTNSSSHNLPPDTEILMVPQSSDMESIYIVPQDQGHDYLNIQVTEEVISDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEEELNDEDSLVPDEEETAKGRRKKAQLSTSARKRKNTTGMMKRNISLDGLTKLDGNKFSSKSYEYVVEDMRLLEDDTEQESDVRGDSIASSSRWNDSMITESHAPRWPITDPTKPYVCQYCGVGFAREKALASHARIHGGDSPLECTNCGDMFWDANVLREHVRTKHGIISSDGINVEYETNESFTSDDRVGEFYCDTCGVPFHRMDLLKRHRKIHIKQETDESIEESSHHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGERCRDDAEVAEHVRQNHAEDAPPNTCTLCGKTCKDKRSLLKHSWVHNVDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRTFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSLTPYLCKVCGDSFATSEEIVLHIVQHCDDNTALRRQPQVGPRKYKRRRKIKAHESSIPVLVSQSNENFNSIEGSESDDNTKRKLGKRNKQNRSNVEEGYQNVLKSFESSLQNINSIVNSKALSTAKSKISKKKIKKEEKKTPETPSQAPPGRPKMIHTQKTRVPVELGSDGVKKGQKTKTMVTRTPKVIPGEPKLGIFPGGERNRPRTKNVSYHVEGKFQVTPATFPRPKGSSEIAPLTQSFSDVKIKTEYNAVASKSSNYDSQNGNIENTKTLDDKKKSPIKGRTLRRTKMNIKQEPEEILTNEVVQNNENEEPGTSNIFNQPEIDGNNMEVAFEAHVIADEVTENESILPDLDNVNHTEEVSNSNKMKLSVKVESTLQHEHLLQNVSQDIPETIIPDAVEYTCEMCSAVFATRAELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00317629;
90% Identity: iTF_00317629;
80% Identity: -