Cfor002719.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chelonus formosanus
Gene Symbol
-
Assembly
GCA_028641665.1
Location
CM054001.1:8270036-8276780[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 5.5e-06 0.00064 20.4 1.0 1 23 162 184 162 184 0.98
2 31 0.0024 0.28 12.1 1.9 1 23 207 230 207 230 0.96
3 31 0.0002 0.023 15.4 1.0 2 23 237 259 236 259 0.96
4 31 0.00021 0.024 15.4 0.5 1 21 279 299 279 300 0.95
5 31 0.078 9 7.3 0.1 3 23 396 416 394 416 0.92
6 31 0.013 1.5 9.8 0.3 1 23 422 445 422 445 0.91
7 31 0.0001 0.012 16.3 0.1 1 23 512 535 512 535 0.96
8 31 0.018 2.1 9.3 0.2 1 23 541 564 541 564 0.96
9 31 0.13 15 6.6 1.9 1 23 577 599 577 599 0.97
10 31 3.6e-05 0.0041 17.8 1.1 3 23 643 664 642 664 0.96
11 31 0.0067 0.78 10.6 1.3 2 23 726 749 725 749 0.94
12 31 2.7 3.2e+02 2.4 0.0 2 23 758 780 758 780 0.84
13 31 0.016 1.8 9.5 0.1 2 23 787 809 786 809 0.95
14 31 1.1e-05 0.0013 19.4 1.2 1 23 817 839 817 839 0.98
15 31 0.032 3.7 8.5 2.7 2 23 868 891 867 891 0.93
16 31 0.00019 0.021 15.5 3.3 1 23 894 917 894 917 0.97
17 31 0.016 1.9 9.4 0.5 2 23 924 946 923 946 0.95
18 31 0.0014 0.16 12.8 5.0 1 21 972 992 972 993 0.95
19 31 0.0024 0.27 12.1 1.8 2 23 1007 1028 1006 1029 0.93
20 31 0.32 37 5.4 1.1 1 23 1032 1055 1032 1055 0.94
21 31 0.029 3.4 8.6 3.2 2 23 1062 1085 1061 1085 0.92
22 31 0.85 98 4.0 0.2 2 23 1093 1115 1093 1115 0.95
23 31 9.5 1.1e+03 0.7 0.0 2 23 1122 1144 1121 1144 0.89
24 31 0.2 23 6.0 2.7 2 23 1153 1175 1153 1175 0.96
25 31 3.4 3.9e+02 2.1 2.6 2 23 1181 1203 1181 1203 0.92
26 31 0.0075 0.86 10.5 0.3 1 23 1266 1289 1266 1289 0.97
27 31 0.0011 0.13 13.1 3.1 1 21 1315 1335 1315 1336 0.95
28 31 0.44 50 4.9 1.3 2 23 1435 1457 1434 1457 0.94
29 31 0.6 70 4.5 0.9 2 23 1464 1486 1463 1486 0.95
30 31 0.61 71 4.5 2.5 1 23 1497 1519 1497 1519 0.97
31 31 0.77 90 4.2 0.1 3 20 1528 1545 1528 1547 0.95

Sequence Information

Coding Sequence
ATGTACAATCTTGagaatttttatgactttaGAACGGCATGTGTTAATGCTGTAGCATTACTTGAAAGATCTCTTCCACCAAAGGCACCAtcaaATGGTGGTACTCATAATGACATGGAAAAGCATTCAGAATTACGTTCAGAATTGCttaaagaaaaggaaaaaatgcCAATCTTGATACCTGAAGCACCAATAGTGAATCCAAATGCTGCATTAGGCACGCCACCAAGACTTAATTCAGATGGTGAGGCAGATCAAGAAATTGAAGAGATTCTTGAACACAGTGGTACTGATGAAGgATTGGATGATGGAGAGGACAGAAAATCAGATGAGTACGAGATGGATATGGAGACGAATCCAAGTGACTTTCTAGAAATGCCACCGATGGTCACCGAAGATCCGGAAGAAACAGATGGAAATCTTTTACAAGTTAACTCTCAATCATCTAGTGTCTTCCAACATACATCAGAGCAACATGAAGTCTATGTATGTTCATTGTGTAATAAGGCGTTTAGTTCAAAAGGACATCTATCCCTTCACGCGAGAATTCACGTAGGTGCAGGTGACGTGATAGGCGAGAAAGTCATCACAGACGATCATACATCATACAAACGTCCTTACCAATGTGATCTCTGTAACAAATCGTACTCCACTGCTAAACATAGGTGGGGACATGTATCAACGACACATCGGGGTCATCCGGCTGTAACATGTAGATATTGTTCGAGAATTTATTCAACTCGAACTAACTTAGAAGAGCACATTAAATCTAGACATACAGGTTTACCACCTCCTCCAGAGACTACAGTTCCTTATATTCAACAAGACACACGATATCAATGTAAAACATGTCCTAAAATGTATACTAACATTACTGATTTGAATAAACATAGTCGAATATGTCTTGGAGATCGTCTTAAAGAAACATCTAAATCAAATCTCCAACCAGTTCAACAAAAAGGAAAAAGTCTTATGGATACTTCTGAGGCATCTAGTGTAGATTCTGATGAAGATAGTAAAGATTATAGAAATGCTGAAGCAAAATTATCGAAAAATCCacaattaactattttaaaacaaGCCTTAACAAGAGGAGAAAGTTCAAAGCGAGATACTGATGGAAGAAATGCGTATAAATCATTAAgagttgataataatgaaggtGATGGACAAAAACGATGGTTTTGCGAGACATGTCCGCAGTCATTTACCTCAATAGAAGTATTGAAAGAACATGAAGTAAGTCATGAAGGAGATAAACCTTACATCTGCATTCTTTGTGAGAAAGATTTTGTCCTAAAGTCTTCCTTAAGCCGACATATATTGTCTTCTCATGGTGTTGATCCTGTGCCAATCGTTGACAGTGATAAGTGTTTGAAAAAGACAGTGATGGCTCAATTGAATGCTAAACATAGTAGAGATGAACTCAAAATTAAAAGAGAACCGTCTGAATCTTCATTTTCTCCGGAATCTcgtgaaaatgatgaagaaggAGTGAGTGGTCATGATAATATGATTGAAATTGAAACTGTTTTTGTTTGCGAAATATGTACGCGTGATTTTAACGATCGTGCATCATTATGGCTTCATATTCGTGCCACCCACAAAGAATATGCAGCATTTGCTTGTGGAGTTTGCTTGAAAATTTGTCCAGATAATGAACAATTGTTGAATCATGTAAATATGTATCATGGAGGATCAAAGTTGCTAGTCTCGGAACAACGGAGATACAGTTGCACTATTTGCGGAAGGCAGCATGACtcaagaaaaaagttaatgaCTCATGTTTCTATTCACAACGTAGACCCAAGTTACGATCCAGCTGCTTTTGTCCAACTTAATAGCAATTATTACAACGAAAACATCAATAGCAATGAAGGCCATGAACAAGGTGATTTTGATGCTGAAGATGGTGAAAAAGTTGACTGTTTTATATGCTACAAATCATTTCCTAATGAAGATCACCTTATTCGTCATCAACGAAACGCACACAAATCCGAACCAATATCTTTAAACAACGATTTCAATAATTCCAATGGCTCCGGAGTCAATCCGAATGGTAATAAAGCCCAATATCATCTTTTCTTTGTTTGTGAACTTTGCGGTAGTTCACATCCAAGCAAATGGGAACGTTGGCTTCATGTGAGCAGCGTTCATAGTGAAGAACCTTTGATAAGATGCGAACGAGAAGATTGTGGAAAGATTTTTGCTACAAAATCTCTAAAGAATGAACATACTCAACATCATATGATTCAAGGTGTGTCTCCTAATACGTGTGAAATTTGTGGGAAACTTTGGGGTAGCCGGGTTGATTATTGGAAACATGTAATGGGTGTTCATTCGGATACAGTTCCATTAATATGTGGAGTTTGTCTAAAAGTGTTCCCTGATGTGATACAACTCAGTAACCACGTTAAAACCAAGCATTGGCCATTAACGAATGGTGATTTTAGCTGTGATATTTGTGGACGTccttattcaaataaatctaaaatgtCACGGCACAGAAAGATTCACGGATTGGAAGCTGAAGGTTATAATGGTATGAGCGAATCAGCAAATGAACCAGCACACTTAGAATCAAATCCAGAAGTTGATTTGACGTGTGAACTTTGTACAGACATGGTATTTACCAGTTGGGAAGATCTTTGTCATCATCGAAGAATGACTCATGGTTTGTTTCCTTGCGATTTATGTAACAAATGCTATGGACGTACGTCACACCTATGGAAACACGTTAATAGAGTCCACAAAGGACATAAAGATGTTACTTGTAGATACTGTATGAAAACAAGCGCATCTAAAGATCATTTAGCCGCGCATATTGCCAAGATACATCGATATGAGCCTGACACTAAACAAACATTGAAAGACGCCAATTATAAATTACCTAATAGTGAAGAAGAAGCTGTTCATCATTGTGAAAAGTGCAATAAAGCTTTTCACAAACGTTATTTACTTAGACGTCACATGAAAGGCTGtcaaaattatagaaaagatCCAGGAGCACTTTTAACACGTTGTCGAGCAtgtgaaagaatttttaaagatcgTGCAAGTCTTCAAAAACATATTGAAAATCATCACAGTAGTTATACGTGCCATTTATGTAATGAAACTATTACTTCTAAGCTTGGAATTATGACTCACAATCGAGTTAATCATATGAACCATCCAGATCTTACTTGTGATCATAATAATTGCAAGAAATTATTTAGGACTAAAGAAGATTTGGAATCTCATAAAAAAGatcataaatatcataattctCCAAATGTTTGTGATTTTTGTGGTGATACAGTcgaaaataaacttaaattaaaaatgcatattttatcattacatCGAAATGAGATTGGAGTTTCTTGTGGAGTCTGCTTGATTCCTATGAAAGATCCTCAAGACTTAAAAAGTCATGTAGAGAACGTTCATCCAGGCATTCTTTTAAAGCCAAACACTTGTCAAGTTTGCGGCAAACAATATGCATCTAAATGGAAAGCTTTCGACCACACTAAAAAATGTCATGGGAAGGTTTTCAGAACATGTAAACAATGTTTAGCAGTCTTTACAACAGATACAGACATAAAACATCATTATGAACATGTTCACAATGTTCCTAAAGATCAACTTGCAGGTTTTGAAAATCATATGGATTTATCAGGAAaagttgatgataatgaaCAATCAGCCATTACAATTAAAGAAGAACCTGAAGATATAGAATACGAAGATGGTCTTTATGATGATATGCCTCGCATTAAATCGTCTAAAAGAAAACGATCTCCTCACGATACTTATGATTGTGAAATTTGtccagaaatatttttaaattgtgatACTCTAGCTGAACATTATCGAACAATTCATAATACAGATccagaaaaaatgtttaaaaaatctaaattaaataatacaaagagAAAGATGAGAAATCGAGAAAATTTCGaatgtaaaaattgtaaaaagcAGTTTTGtacaaaaacattattttggAATCATATCAATGTAtgtacaagaaaaaattcattaagagATGATCAATTAACTAACTATAATACTTCAATACTTGAATcacacttaaaaaataataatcaaatcaaGAAAGAGCCGTTAGATTCCATTTTGAACgagaatttaaatataccGGATTTTAACTTGTTTGAGGGAATAAACTTACAGCTGTCGGGTCAAAAACCGGTACCAAATTTAATGCCATTGTCTCATATGAAAATGTCTCAAGGTATTAAATGCTATAGAAAAGATTCAAGAAAGGTCTACGACGAATCAACAAATACAGTGTGTGCTTGTGAGGTTTGTGGTAAACAATGGCCAgctaaaaaacatttatggCAGCATTTAATTCGTTTTCATCGAGCAGAAGCTGCAGTAACATGTGGAGTCTGTTTAAAGCTTTGTACAACATATAAAGGACTTTCGCAACATCTTAAAGAAGCACATGAAGCACTTTTGTCATGTGAAGGTAATAATTTCACCTGTAAAACTTGTGGAAGATATCACAATGCTCGGAGCAAGTTATTACTACATATGAGTATTcatattaacaataatgagCACATCTGGTGTCAGAAGTGTGCAGCAAGTTTCGATTCTGAGGAGAAACTAAAGCAACATGTGGCCAACTGTGTAATAAAACGACGAGGTGAAGAGTTTGAAGAACAGAGTATAGATCCAGAAGATGTTAAGCTTGAAGGTGATGAAGATAAGGGTAGTTTAATTGGAGATAGTGCTTCGTTACTTGGAGAAGGTGAAGAAGTAGAATTCGATTCTGAAGTTGAGGATGCTTCAGAGAATGGAGAAGAACACAGTAATGATACTGATCACTCTGAAGATTCTGAAGATAGCACTAATGGGAGTGCGACTGAAGGTGAAAATGAAGAGGAAAATGAAAGAGAATCTCGAACTGACAGTAGAACTCTTGAAGAAAGAAATTGTCAAACAGATAGTGAAGAACAAGAGATGAATGAATCTGAAGTTGAAGATGAAACAACTGGTCGAGATTCAACTATAATTGTGGAAAATAAAGACATGGAAAAGTCAGAAAATGATAATGCTCCAAAGAACAATGATAacgaagaaaatgaagaagaagaagaagacgacaatgataatagtaataatcataatgaaaaagaaaaggaaagtcatagaagtgaaaaagaagatgatgattatgaagatgatgatgggCCACCAATATTAAGTCCTATAATGCCTATAGTTATTTCTGATGAAGGTGAAGAGAGAAAAGATAAGGCTGACGATGATtcaaatcatcaattaaactCTGAAAAATCACcaaatattgaagaagaaaatgaagaagaaatccCGGAGCTAGATGGTGtagaaaatacagaaaaagaaattttatcaatgaattcaaatACAATCGATTATTATGAGGACTCATCAACTGTTAAATCGAATGCAAGTGTTGTAGATGAATTAGTAGAGTCGGAAGGTGAAGGAAAGGATACGGAAATGGAAGATGATGACAGCAGATTACAAATTGAACAGAGTAATGGAGATTCTTCATTAATGAAGACGTCTGAACAGGAAGAAAACTTAAGAGATGATGAAGATGTTGGTGATGAAATGTATGAAGAAGATATTGATGCTGGTGAAGGTGACAATGACATGCAACTCGATGATTTAGACGGAACAGTTTTAATGGTTGAAGGACTTGACGTTGAaggaaatgaaatattgattcaaCAAAGTGTTGCGGAAATGGATAACGAAGATTCCATACAAGAAGTCACaggttttatttatcaagatgAGAATGATGGGGAAAATTATGACGATGGACAAGAACTTGAAAGTCAAGAAGTTGAAATGGATATGGACAAAGATGATCAAGAAATGGAAATTCagtatgaaaatgataatgataaacatACAGATGAAGAAATTAACGATAGTGATTTGGAGATCAATTTGAGTGCCAAAAATGATGTGTCAAGGACGtag
Protein Sequence
MYNLENFYDFRTACVNAVALLERSLPPKAPSNGGTHNDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTDEGLDDGEDRKSDEYEMDMETNPSDFLEMPPMVTEDPEETDGNLLQVNSQSSSVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPPPETTVPYIQQDTRYQCKTCPKMYTNITDLNKHSRICLGDRLKETSKSNLQPVQQKGKSLMDTSEASSVDSDEDSKDYRNAEAKLSKNPQLTILKQALTRGESSKRDTDGRNAYKSLRVDNNEGDGQKRWFCETCPQSFTSIEVLKEHEVSHEGDKPYICILCEKDFVLKSSLSRHILSSHGVDPVPIVDSDKCLKKTVMAQLNAKHSRDELKIKREPSESSFSPESRENDEEGVSGHDNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICPDNEQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPSYDPAAFVQLNSNYYNENINSNEGHEQGDFDAEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSEPISLNNDFNNSNGSGVNPNGNKAQYHLFFVCELCGSSHPSKWERWLHVSSVHSEEPLIRCEREDCGKIFATKSLKNEHTQHHMIQGVSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSNHVKTKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEAEGYNGMSESANEPAHLESNPEVDLTCELCTDMVFTSWEDLCHHRRMTHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRYCMKTSASKDHLAAHIAKIHRYEPDTKQTLKDANYKLPNSEEEAVHHCEKCNKAFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMNHPDLTCDHNNCKKLFRTKEDLESHKKDHKYHNSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQDLKSHVENVHPGILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDTDIKHHYEHVHNVPKDQLAGFENHMDLSGKVDDNEQSAITIKEEPEDIEYEDGLYDDMPRIKSSKRKRSPHDTYDCEICPEIFLNCDTLAEHYRTIHNTDPEKMFKKSKLNNTKRKMRNRENFECKNCKKQFCTKTLFWNHINVCTRKNSLRDDQLTNYNTSILESHLKNNNQIKKEPLDSILNENLNIPDFNLFEGINLQLSGQKPVPNLMPLSHMKMSQGIKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYKGLSQHLKEAHEALLSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCQKCAASFDSEEKLKQHVANCVIKRRGEEFEEQSIDPEDVKLEGDEDKGSLIGDSASLLGEGEEVEFDSEVEDASENGEEHSNDTDHSEDSEDSTNGSATEGENEEENERESRTDSRTLEERNCQTDSEEQEMNESEVEDETTGRDSTIIVENKDMEKSENDNAPKNNDNEENEEEEEDDNDNSNNHNEKEKESHRSEKEDDDYEDDDGPPILSPIMPIVISDEGEERKDKADDDSNHQLNSEKSPNIEEENEEEIPELDGVENTEKEILSMNSNTIDYYEDSSTVKSNASVVDELVESEGEGKDTEMEDDDSRLQIEQSNGDSSLMKTSEQEENLRDDEDVGDEMYEEDIDAGEGDNDMQLDDLDGTVLMVEGLDVEGNEILIQQSVAEMDNEDSIQEVTGFIYQDENDGENYDDGQELESQEVEMDMDKDDQEMEIQYENDNDKHTDEEINDSDLEINLSAKNDVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00317620;
90% Identity
iTF_00317620;
80% Identity
-