Cfor015822.1
Basic Information
- Insect
- Chelonus formosanus
- Gene Symbol
- sens
- Assembly
- GCA_028641665.1
- Location
- CM054005.1:12288809-12303163[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00013 0.23 11.8 0.6 14 39 249 271 242 278 0.80 2 4 0.098 1.7e+02 2.6 1.3 19 29 282 292 273 299 0.82 3 4 9e-06 0.016 15.6 2.1 3 41 295 329 293 331 0.86 4 4 0.055 95 3.5 0.0 18 38 337 354 334 360 0.75
Sequence Information
- Coding Sequence
- ATGTTAGTAAAAGaaaCAGTACCAAGAACATGGCTAAGCAAACCAGAATTACATTACAGTAGTATAGGAGTTCCTGCAAGTTCACTATCACCTCCTGCTACCCTCTCGCCGCCAAGTAGCCCGAGTATTTTGCCAACATCACCCTGGAGTCCAGGTGGTCTTACCGGTGGTAGTAATAGCTCCTGCAACGGAATCCCAAATCCACCGACGGCTGGTCAGCTTGCACCTGACCAACGATTTGGGGCCTTCACCTTTGTATCCAGCTATAATTCTGATTTAAAACTTCAGAAACAAACACACACCCCAGAAGCTACATCAAGAAATcTTACAGACATGTGTTGTGGTTTGATGTATGGTGGATACGGCACAACCTGGTGGGCTCATCATGCGGTGGGCCTTTTGCTGCCTCATTCTCTTTTACCGCCACGAATTCCTTCTCAGTCGACGACATCCACAACTGAATGCACGCCAATTCATCACGAACCAGCTAGTCCAGCCAAAGCAACCTCACCCATCAGATGCACACCTGATCGATCTCCATTCGTTGATGAAGTACCATTAAATCTTAGTACGAAACCAAATGATGTATCGTCAAGTATTAATCGCAAGTGCGAGATATGGTCACCAGGTTCAGTATGTGAACGTGAAGCGAGGGAAACTACTACTCAGAATTCACCGTTAACTACCACACCAATAATAACACGGCAGATTCACCATTCACCCCTCACGCCTCCATCATCTAACGAGCGAACATTTCAGtgCAAACAATGTGGTAAAGCGTTCAAAAGATCTAGTACATTAAGCACGCATCTTCTCATTCATTCAGATACCCGACCATACCCTTGCCAATACTGCGGTAAAagatttcatcaaaaatctGATATGAAGAAACATACGTATATTCACACTGGAGAGAAGCCACATAAATGTGTCGTATGTGGAAAAGCTTTCTCACAAAGTAGCAATTTAATAACACATATGCGAAAGCATACAGGTTACAAACCCTTTCAATGTGGACTTTGTGATAAAGCATTTCAAAGAAAAGTCGATTTAAGGCGACATCGAGAAGGACAGCATCCATCTGCACCTGCTTTAGATTATCGTTCAATTCAAGCACTCAGTTCTCCATGCCAACATTCACAATCACCACCAATTCACGTTCCAACTTCAAATTATCTTATGATATCTGCTCAAGATAGCAGCTGa
- Protein Sequence
- MLVKETVPRTWLSKPELHYSSIGVPASSLSPPATLSPPSSPSILPTSPWSPGGLTGGSNSSCNGIPNPPTAGQLAPDQRFGAFTFVSSYNSDLKLQKQTHTPEATSRNLTDMCCGLMYGGYGTTWWAHHAVGLLLPHSLLPPRIPSQSTTSTTECTPIHHEPASPAKATSPIRCTPDRSPFVDEVPLNLSTKPNDVSSSINRKCEIWSPGSVCEREARETTTQNSPLTTTPIITRQIHHSPLTPPSSNERTFQCKQCGKAFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCVVCGKAFSQSSNLITHMRKHTGYKPFQCGLCDKAFQRKVDLRRHREGQHPSAPALDYRSIQALSSPCQHSQSPPIHVPTSNYLMISAQDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00317026;
- 90% Identity
- iTF_00317026;
- 80% Identity
- iTF_00317026;