Basic Information

Gene Symbol
-
Assembly
GCA_028641665.1
Location
CM054005.1:10156914-10159623[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.052 61 4.1 0.0 2 14 647 659 646 672 0.72
2 3 0.09 1.1e+02 3.4 0.0 27 45 703 721 700 722 0.91
3 3 6e-08 7.1e-05 23.1 0.1 3 43 729 770 727 773 0.86

Sequence Information

Coding Sequence
atggagaaaaatttgcaaaataattctcggaaggaaaaaaaacataaattagaTAATTCAACTGAGCAATATCTTGATTTGAATACCACTACGTCTGAAGATGGCTCATTGACAAAAgtcaaaaagaaaagaaaaagaaaacgagatCATAGCTCAGGAAGAGAAGCTACAGAGAAAGTTGAAGTagacaatgataataattctgaTGAAAGTGAAGTAACGCACAAATTTTTGAAGACTAAATCTGTAGGTGAtgttgatagtaaaaaaaggaaaaaaatacaaacggAATCAGacattgaaaaacaaaataaatataatgataacCATGCATCTGATCTCTCTAGTGATGATAGAtcgaaaaagaagaaaaagaaaaaacataaaagagTCGAAACTTCAGAATTGtctttgaatgaaaattttaatgatgttGAAGCTAGTAGTGCTGATAAGGGAAAAGCTAAAATAGAAAGTGAAATGGAGACCGATCGTGCcatgaaatatcttgaaaatgaaaatttatatattgatagtGAACTAGATACCCTCAGTATTAAaaccaagaaaaaaaaaaaaaagaaagaaagaaatgtaCATACGAATGAGGACCTAGATGatattaaagttgaaaatcAATTGCAATATACAAATAGTCAATTATTAGATATTGATTACTCaactaataatattgatactagtgttaaaaaaaagaaaaagaaaaaacatgaaGACGTAAAAATCGAAAACGCTCTCTTAGATAATCAATCTGAATCAAAAACTGAAGTCGAAATGAAAGTacaagttaaaaatgaaaccaATCAGGAATCATCCATCAACTCATCAAGTGAGTTACATATCATAAGAGACAAAAAAGAgcataaacatttaaaatgtgATAAAGTTAATCGTTGCTTAAATGATTCAAGTATTAAAACTGCACAAGAAAAGATAAAAGGGATTGAAGATGAAAACAATACTGATgacaatcataaaaaaagtaaaaaaaataagcaaaaacAAGAAGCAAATGATGGAGAAGTAGAAATAGATTCttcaatagaagaaaaaacCTGTATTCAAGAAGAAGATGGTCCGGAATCATtccaaaaagtaaaaagtaaaaagaaaaagaataaaaagcatGGTAATAATAGTGAAATAGATGttattaaagaagaaattgatgcaaaaaatattgaactcATTGAACCTCaacacagaaaaaaaaaaaagaaaaaacataaaaaggAATTAGTACAAGAAAAATCAGAATCTGTGCATCTAGATTTAGATTATGAGACTCCTAATCAGCCTAAAATTAATGAGGACCATGTGGCTAATCaaaattgcaagaaaaaaaataaaaaacattcgaAAGAATCGGAATCTATACATCTAGACTTGGATTATGTGGCTTCTGATCAAGGAAGCACAAAAAAAGACCAGTTCGATAGCCACggttatgagaaaaaaaagaaaaaacataaacGCCATAAGGAAACAACAGCATTTGAAAACGAAACAGACTGTGATTCACCAAAGACAAGATataaaaagatggaaaaaatcCTTCAAGAAGAAAGTTCCATAAAAGATACATTAGATAAACAGCCTGAAGAAAGTAGTGGTTTTGAATCAGAAGAAGGCGATTATAGTGAAAGTGAAAGGATTCCTAGAATGAACAAAACAAAACCatcgatttttattaaatatcctAAATTAGCTAGGATTATGCAAGATTCAGATAGTGATGACAATTATCCACATCTACAGCACCGAAAACTAACTTTATCTGAGGCTCtgAAACTGTCAGAACTTGAAATTCAATTACGTCATGAACCACCACCACAGCATCAAATAGAAAAGTATCCTGGTACTTGTACTTTGACtgcagaagaaaaaagaaagtttatgGAACATTGCGTATTAAAGAGTGGTAGATTTACTTATGAAGAAGATCAGAGAATAGTtcataattggaaaaaattctgCAAAacGCACGGATGGAGAAgatcaataatttatccatTCTTACATCAAACAAAGAAAGGATTCTTTTATATTGCTTCAGTTGAAGGAAGAAAGAAATTCGTTCAATTTTTAGCAAAAGGTTTACCTAATAGAAGTCTGTACAGTGTTTATACTcgttttagaaatttatatgCTACTCATAAAACATCtagGTATAcaaaagaagaagatgaaataCTAATGAAAGAACTTAAAGATCAGTATGGTCGTAATAGATTTTCGGCGATTGGAAGAAGATTAAACAGAACAAGAGCATCTGTATGGCGACGTTATAAATTGTTGCttgcaaagaaaaaagaaaactcaGATACCGAAGATGAAGTAACAAATGAATcgatcgataaataa
Protein Sequence
MEKNLQNNSRKEKKHKLDNSTEQYLDLNTTTSEDGSLTKVKKKRKRKRDHSSGREATEKVEVDNDNNSDESEVTHKFLKTKSVGDVDSKKRKKIQTESDIEKQNKYNDNHASDLSSDDRSKKKKKKKHKRVETSELSLNENFNDVEASSADKGKAKIESEMETDRAMKYLENENLYIDSELDTLSIKTKKKKKKKERNVHTNEDLDDIKVENQLQYTNSQLLDIDYSTNNIDTSVKKKKKKKHEDVKIENALLDNQSESKTEVEMKVQVKNETNQESSINSSSELHIIRDKKEHKHLKCDKVNRCLNDSSIKTAQEKIKGIEDENNTDDNHKKSKKNKQKQEANDGEVEIDSSIEEKTCIQEEDGPESFQKVKSKKKKNKKHGNNSEIDVIKEEIDAKNIELIEPQHRKKKKKKHKKELVQEKSESVHLDLDYETPNQPKINEDHVANQNCKKKNKKHSKESESIHLDLDYVASDQGSTKKDQFDSHGYEKKKKKHKRHKETTAFENETDCDSPKTRYKKMEKILQEESSIKDTLDKQPEESSGFESEEGDYSESERIPRMNKTKPSIFIKYPKLARIMQDSDSDDNYPHLQHRKLTLSEALKLSELEIQLRHEPPPQHQIEKYPGTCTLTAEEKRKFMEHCVLKSGRFTYEEDQRIVHNWKKFCKTHGWRRSIIYPFLHQTKKGFFYIASVEGRKKFVQFLAKGLPNRSLYSVYTRFRNLYATHKTSRYTKEEDEILMKELKDQYGRNRFSAIGRRLNRTRASVWRRYKLLLAKKKENSDTEDEVTNESIDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-