Cfor010823.1
Basic Information
- Insect
- Chelonus formosanus
- Gene Symbol
- retn
- Assembly
- GCA_028641665.1
- Location
- CM054003.1:20481735-20485029[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-20 1.2e-16 61.2 0.0 16 89 14 85 8 85 0.94
Sequence Information
- Coding Sequence
- ATGGCGGCAGCGCCCTTCATCCTCCATACCGCCGATCCTGATGgCACACCAATCAATCGATTACCAATAATGGCAAAGTCAGTTCTAGATCTTTATGAACTTTACAATTTAGTGATTGCTCGAGGTGGATTAGTAGACGTTATTAACAAGAAATTGTGGCAAGAAATCATCAAAGGACTTCATTTGCCATCTAGCATTACTTCTGCTGCATTCACATTACGTACACAatACATGAAGTATTTATATCCATATGAGTGTGAGAAACGTCGACTGTCTACTCCAGCTGAACTCCAAGCAGCAATTGATGGAAATCGAAGAGAAGGACGTAGGAGCAGTTATGGAGCATATGGGGGCGGTGGTGACAGTATGATTCAAAGAAGTCCTCACACACCTAATACACTGGCTTTACATGCTCAAATGTCTCCATTATCTCTGGTCACAGGGGTAGGTGGACAGCACCAAGCATTAGCAAATGGAAGTGCAGCACATACTCCATTACCACATCATCCTCATCATCCTCAACATCCACAAGGACATCCATCCACTGGGCTGATTCCAGGTTTAGCACCAGCTGAATTAGAAGCCAGAATGGTAGAGTACGTGAAACTTCTCAACAAAGAATTAAGAAATGCAGGTGCAGGAACACCTCCACCAATGATACACCGACAAGGGAGTGTAACATCACCATCCGGAACGCCGCCACGTGATAGTGCTTTAAATGCACTAGAAATGTCACGATTAACACTGTggaatatgtataataataatacattatatCCTGGTGTAGGACAACAACCACCACTATCGCCTCAAGCTCATTCGCCACACCCTCAAGCATCAAGCCCGGAACCACAAAGTGAAGCTTTGGATTTAGGACGTAGATCTTCGTCTGTATCATCGTCTCCTGTGAGACACAGTCCTCCATCATCTAGTGGGAGTATTCAAGTTAAGAGAGATCATGATCTGACTGGTACACCTGGACTACAAAATCTCAAAAGATCCTTCTCTGATGATGAGGGacttatagaaaaaaataacatgcCTACCGTTGGTGGTGGTACTCATATCAAGATCTCAAATCGTGGTGACGGTCGTAATGGTGACAATTCTCTAGTTGTTAGCATGGAAATCAATGGAATTATGTATGAGGGTGTTTTATTTGCGCAAAGTGAAGGCAGAACAACTAATCCTAcaaacaacaacaataatacAAAAACACAGCGAAGTTTAGTTtctcaataa
- Protein Sequence
- MAAAPFILHTADPDGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGGDSMIQRSPHTPNTLALHAQMSPLSLVTGVGGQHQALANGSAAHTPLPHHPHHPQHPQGHPSTGLIPGLAPAELEARMVEYVKLLNKELRNAGAGTPPPMIHRQGSVTSPSGTPPRDSALNALEMSRLTLWNMYNNNTLYPGVGQQPPLSPQAHSPHPQASSPEPQSEALDLGRRSSSVSSSPVRHSPPSSSGSIQVKRDHDLTGTPGLQNLKRSFSDDEGLIEKNNMPTVGGGTHIKISNRGDGRNGDNSLVVSMEINGIMYEGVLFAQSEGRTTNPTNNNNNTKTQRSLVSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -