Cfor008196.1
Basic Information
- Insect
- Chelonus formosanus
- Gene Symbol
- Jarid2
- Assembly
- GCA_028641665.1
- Location
- CM054003.1:2648216-2654344[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3 9.3e+03 -2.6 0.6 45 83 147 183 140 184 0.57 2 2 4.6e-23 1.3e-19 70.7 0.1 6 89 1326 1407 1322 1407 0.94
Sequence Information
- Coding Sequence
- atggTGTTAGGGAGAAATGacaaaaggaaaagaaaagcTGGCGATCTGGTTGATCTTGTGGATCCTCTCTCTGAGAGTCCAAAAAAagCCAAAATTCATGCACAAAGAAAATTCGCACAAGGAGCTGCAACAATGTTTACTTCATCTCCAACTtttgttaaagaaaaagataaaccTAAATCTACTGTAGTGAGAGAATTAATACCACATAAACGACCCAATCCTACagattttttaacatttttgtgTTTCAGAgGTACATCTATATTGCCACCAAGTCTCGATTTTTTTAATCCCAGTCATacaaaaaaagcaaaaacaGAAACAAAAACTTCTCCAACACGAAATTCTGATCGTAAGAGTGGATCAATCAGTACAAGTACATCAACTGAATCGccaaaaaaagaatcaaatcaAAGTACAGTGTCTAAAAACAAATCTACAGAACCTGTTAAAAAGAAAGTGGCTAATCACAATGTgcaaaataaagttaataaatataactcaGCTACTTCAACAGTTCAagcattaaagaaaaaatatcaagagcAACGTCTGGCTAAACAGCGAATCAAGAATCATATGAAGACTCCATGTGTTATAAGAACTCGTTCTGCTACAGAGCGATCAATGTCTAGTACTATCAGAAAATTAGCTCCTAAGAAATTTTTACCGCGAGTCGAATCTAAACGACATTGTTTACGCAGTAGTACAATACTGAAAAATCTAGAAAAaaaattggcAAAAGAGCAAAGCAGCGAATCATCTGAATCAGAATCAGATTCTGAAGAAGATAATAAATCAGATATAAAGCCACCacatgtattaaaaaaatcaacaaagaCTGTTAAAAAGATTACTTCTCCAGCAAAAATTGAACATAGGAGAATTACAAGATCTCGAAGTGATGTGTCTTCAAATCAATCTCAATCTCAACGACCTACCAGGAAAACTAAAGAGGCAGCTGCTGTTTATATGGAAATACTCAGTCGAAAATTAGTCAGTCCTGATTTAGATGCTGacgataatttatcattagatAGCTATCCTGAATTACCTAATACTCGAAGAAACgtagaaaatgataataaaactaaaataaaagcCAATGGAAGAGTCAATAAGGAtctagaaaaatatgaaacttCAGGAAATAAAACTACTGACAAGCAGAAAGGTGAGAagaatgtgataaaaaataaaaagacaatGAAAGAATCATCTGAAAGCGATGGAGAATCTGCAAGTTCTGTAGAGAGTAATAGAGTAAGACCAATAACAAGACGAAGTAGTAGCAGTCAGATAGTGAAACCAGCAGTCCGAAGTCTTCGATCGTCATCTCGAAATTCTccacaaaaaataaaacctcCTGAAGCTACAAAACCTGTTCAAAACAACAAGACTTGGGTGAAAAGGAAACGAGAAAATAAATCGTCGCCAACAGAGAAGGCTCTAAAAGAGAAAAAGCCGATTaaagaagagaataaaaattcagaagATGATTCATTGAGTaatttgacaaataaaattaaaaagatacGAGAATCAGAAGAATCTGAAGAATTGGAAATACGAGAAAagaaatctaataaaaaagataagattgaatctttaaaaatatcagatgATGAGGGATCTTTTAGAGGATTTACAACAAAAGCTACGATGAAAGcgagaaagaaaattttatataaatcaggTTTTGTACCATTAACTCAGTTAAAATTGcagaagaaagaaattttatcagGTGAAGTGTTTGTAGAGTCATCATCTTCAAGAGCTAGTCCTTCagatatagataaaaaatctcTTTCTATCATAAGTAGTACTATTACTACTCCAGtaaatgataattcaaatgatttgAAAACACAAAATACCATTTCAACGGAGACTTCATTGAATGagcaatttttcaaatcaaactTTAGTGGAACTCTGATTTCTCCAATAGTTCTAGATGATAACGATCAGAGAGATTCAATATCTTCAGGAAATATTCCTTTGGGTTCATTGTCTTCAAGACCAAGTCTTACAGAATCagaaaagaaatatcattttatttcaaatcacaaccctaataatttaattgttgagATTCCACCATCAACTTCTTTAGGACGTAAAGAGCGAGTCAGTATGACGACAGAACAGATTGAAAAGTGGTTACAAGAAAGTTCAATAGCTATGGAAGAAGGTGGAGTGGAGATAGAACTACCTTTAAACTATTCTTATGAACTTCCTGAGAAAATAAAACCAGATGGTAATCATTTATCAATCCCAACAAAAATCCAACATCTGGTAAGGCCAGTTAATGTGGCAATCGCAAAAATAGCCGATAAGGCTATCTCTAAGGACCGCATGGGCAGTTCTACTATAATTTCTGGAACTGGCATTGCAATAGCTAAGCCTACGAATCTTACCAATCCTATACCAaccaacagaaataaaataaatgcagacataaaagaaatcattaaagGAAGAATTGCTAAAGCCAATGTGATTCCTAATAAAGAAACTAGTACTGCTGAAGATAGTGATGTGAGTTCGAAAGCAGATTTAACATCAATTGAAGGATCTCCAGACAAGAAGACACCtgagaaaaaatcaaatgttcAACCACGTAAAACATTTGTGTCTAAAATTAAGGAACGTAAAGCAGCTCCAAGTGTCAATGCATTCTCACCAGAAAATGAAAGCTCTGTCTATGCATTTGAAAGTGATACTGAAGTTCCTGTTAGTACACCTTTTAGAAGAAAACAACGAGATAAATCTAGTATTTCAGGGTCGGATTTGGATTTGTCTAAGAGCGAAAATGATgagaaaagtttaaaaattgtatataaaccggaaaaagatgaaaaagaaaagatttcaAAAAGTGTTGGAACCACCTGTGACGATGAAATTGAATCTAAGAAGTTTATAAATGCTTCAACTTCTTTTGATTCCCATCAATCTAACAGCTATGAGGTACCtgaaaattatagaaataaatctaATGTTCAAGTTCTACCTCTAGGAAAAATTCCAACTGTTTGGAATAATGTTAACTGCAGCGCATCCATAGCAGTTCAAGTTAATTTTGAAGATCAAGTTCAAGATAATGATAAGaaggaaataaatgaagatgGAACTCTGAAAAGTACAGAAATTTCAACTCAAACAGAAAACACAACTGAAAACGAAGACGAAAATGATGATCATGTATTCTATATTCCTTTACAAGCTGTTGCACGAAACGGACGAAATTTAGTTCAAGGACAACCGTTAATACAAGGAGTAGAGGTAAAGTTTGGTAAGAAAGGACCTAATGGGCCCAATCAAAGAGTTTTATTGAGAGCACAGCTGGTGACTAAACCACCATCTGCTGCTCGATGTCCACCTGTTGGGACAGTTCAACCAACAACTAGAACTCCACCAACTATTACTGCTGATCCAGTTCCTTCTACTTCTACTTCAACATCTACATCTACATTGTCTACATCATctacatcaaatattttacctGTTCAGTTTGATATAAAGACTCAAAATACtgagaaaattattacaagtaAACAAACTAGTATTAATACGCCTATAGAAAAGGTTTCTAAGTCTCCAAAAGTTTCTAGAGAGAGAAAAAGCTCAATAGATggtacaaaaaataataaaaagactcaaaataaatctaaaaaagtGTTAGATGTTATTACGAGTATTGAATCAACATTCCCAAGCATGGAAGTCAAAGGAGAGGCTCGTTTAGTTGAAGCGCCAACATTTCATCCTTCtgaaaaagattttcaagATCCTCttgaatatattgaaaaaattcggCCTATCGCTGAAAAATATGGAATATGTAAAGTTGTTCCTCCATCAAACTTTAAGCCTGAATGTAAGGTATCTGATGACATGCGATTCACCGCTTATAATCAGTACATTCATCGAATGCTCCATCGTTGGGGTCCAAACGTTAAAGAAATGATGGCAATCAAAAAGTATCTAGCAACTCAAAGTATTACATTAAATCAACCACCTTGGATTGGTGGTATGGAGGTGGATTTACCTCATCTTTATCAAACGGTTCAAAGCCTTGGAGGTTTAAAGGAAGTAATTGAGAAGAAGAAATGGCAAAAGGTTGCTGATGGAATGAAAATACCTAAATCAGCTCAAGATCGTGTTACTAAACTGGAtgatatatattgtaaatatttattaccttATGATACATTATCAACGGGAGAgcgagaaaaattatttgatgaagTTGAGGAAGAATGGAAAAAACGAGAAAGCAAAGCGTTACAAAGACTTAATCAAACTCCATCTgaaaatgaagatgatgagGATGATGATAGCGATGACGATATTGAGGAATGTATTGTTAAAGGTCGAAATATGCCTCTCAATGCTTTTTACCGAATAGCTAGAAATACTCAGAGAATGTGGTTTGGAGAAAATCAAAGTTCAGCTAATGAAGCTGAAGGAGCTTCAGCTATTGATGTTGAAAGTGCATTTTGGAAACATGTTTCTGAAAGAAAACGCCACGTTTGTGTTCATGCAGCAAGTATAGATTCAAGTGGACGAGGATTTGGATTTTCTGTAGCTAAAAATAGTCCATTTGCTCGTCATCCTTggaatttaaaagttttaacaaACAATGCAGGCTCAGTTCTTCGAGCATTGGGACCATTAATGGGTGTGACCGTACCTACTTTACATGTTGGAATGCTCTTTAGTGCTTGTTGTTGGTATAGAGACCCTCATGGGTTGCCTTGGATTGAATATTTACATACGGGAGCTAAGAAAATATGGTATGGAATACCTGATGAGCATAATGACAATTTTAGAGAAGCTTTATCTAAAATGGTTCCTcgattttgtaaaaataaaaaaatttggttgCCTTCTGATACTGCTATGGTACCACCAGAAATGTTAGTCAGTAATGGTGTTCCTTTATGTAGAACTGTTCAAGAACCCGGTCAATTTATTATAGTATTTCCTAAAGCATTTACTTCCAGTATTTGTACTGGATATGTCGTTTCAGAAAGTGTTTATTTTGCACAAACTACATGGCTGGAACATGctgaacaaatatttacgGATCTTCAAGATAGCTGTGAACCATCTATGTTTTCGTTTGAGAGATTACtctttagtattattaatgattccAGATCTcatattgatgttttaaaacAGattttacCAGTAGTTATAAAAATACGTGAAAGAGAATTAAACTATCGACAACACCTAGAATCTTACGGGTTAGTTAATAAAGAGAAACTTCCACTGCCAGGAAATGCAAAGCGTAAAAAAGGACAGAAAGTTgtagaagatgaagatgattaTGAGTGTGATAATTGCCGAGCTAATTTGTTTGTATCATTAGTTACCAATTCGAAAGACGATAGTACCTGGTGTTTACGTCATGGATTGGTAATGATTGCACAAAAAAAGCAAATCGTTAAAAGCTGTTTACTAAAATACACATATAGCGAGGATGAACTGGatgaattaattcataaacTGGAAGATAGAATCGAAGCCAAATCTAAAAGGACTAATCAAAGTAGACAAACTAGACAATAA
- Protein Sequence
- MVLGRNDKRKRKAGDLVDLVDPLSESPKKAKIHAQRKFAQGAATMFTSSPTFVKEKDKPKSTVVRELIPHKRPNPTDFLTFLCFRGTSILPPSLDFFNPSHTKKAKTETKTSPTRNSDRKSGSISTSTSTESPKKESNQSTVSKNKSTEPVKKKVANHNVQNKVNKYNSATSTVQALKKKYQEQRLAKQRIKNHMKTPCVIRTRSATERSMSSTIRKLAPKKFLPRVESKRHCLRSSTILKNLEKKLAKEQSSESSESESDSEEDNKSDIKPPHVLKKSTKTVKKITSPAKIEHRRITRSRSDVSSNQSQSQRPTRKTKEAAAVYMEILSRKLVSPDLDADDNLSLDSYPELPNTRRNVENDNKTKIKANGRVNKDLEKYETSGNKTTDKQKGEKNVIKNKKTMKESSESDGESASSVESNRVRPITRRSSSSQIVKPAVRSLRSSSRNSPQKIKPPEATKPVQNNKTWVKRKRENKSSPTEKALKEKKPIKEENKNSEDDSLSNLTNKIKKIRESEESEELEIREKKSNKKDKIESLKISDDEGSFRGFTTKATMKARKKILYKSGFVPLTQLKLQKKEILSGEVFVESSSSRASPSDIDKKSLSIISSTITTPVNDNSNDLKTQNTISTETSLNEQFFKSNFSGTLISPIVLDDNDQRDSISSGNIPLGSLSSRPSLTESEKKYHFISNHNPNNLIVEIPPSTSLGRKERVSMTTEQIEKWLQESSIAMEEGGVEIELPLNYSYELPEKIKPDGNHLSIPTKIQHLVRPVNVAIAKIADKAISKDRMGSSTIISGTGIAIAKPTNLTNPIPTNRNKINADIKEIIKGRIAKANVIPNKETSTAEDSDVSSKADLTSIEGSPDKKTPEKKSNVQPRKTFVSKIKERKAAPSVNAFSPENESSVYAFESDTEVPVSTPFRRKQRDKSSISGSDLDLSKSENDEKSLKIVYKPEKDEKEKISKSVGTTCDDEIESKKFINASTSFDSHQSNSYEVPENYRNKSNVQVLPLGKIPTVWNNVNCSASIAVQVNFEDQVQDNDKKEINEDGTLKSTEISTQTENTTENEDENDDHVFYIPLQAVARNGRNLVQGQPLIQGVEVKFGKKGPNGPNQRVLLRAQLVTKPPSAARCPPVGTVQPTTRTPPTITADPVPSTSTSTSTSTLSTSSTSNILPVQFDIKTQNTEKIITSKQTSINTPIEKVSKSPKVSRERKSSIDGTKNNKKTQNKSKKVLDVITSIESTFPSMEVKGEARLVEAPTFHPSEKDFQDPLEYIEKIRPIAEKYGICKVVPPSNFKPECKVSDDMRFTAYNQYIHRMLHRWGPNVKEMMAIKKYLATQSITLNQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSTGEREKLFDEVEEEWKKRESKALQRLNQTPSENEDDEDDDSDDDIEECIVKGRNMPLNAFYRIARNTQRMWFGENQSSANEAEGASAIDVESAFWKHVSERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNDNFREALSKMVPRFCKNKKIWLPSDTAMVPPEMLVSNGVPLCRTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQTTWLEHAEQIFTDLQDSCEPSMFSFERLLFSIINDSRSHIDVLKQILPVVIKIRERELNYRQHLESYGLVNKEKLPLPGNAKRKKGQKVVEDEDDYECDNCRANLFVSLVTNSKDDSTWCLRHGLVMIAQKKQIVKSCLLKYTYSEDELDELIHKLEDRIEAKSKRTNQSRQTRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00317256;
- 90% Identity
- iTF_00317256;
- 80% Identity
- -