Cver023658.1
Basic Information
- Insect
- Cheilosia vernalis
- Gene Symbol
- Pias1
- Assembly
- GCA_949126925.1
- Location
- OX421361.1:62959942-62963769[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.28 4.5e+03 -1.7 0.4 20 38 276 294 266 297 0.83 2 2 1.5e-26 2.4e-22 79.3 5.8 1 50 399 448 399 448 0.98
Sequence Information
- Coding Sequence
- atgcgAAAAACCCGTTCACAGACGCAAGCGGAAAATGGTACGGCTCCCCGAGGCCCTACATCATCTCATGCCGCCACTTCTGCTGTGTCTGTGCATCAAAATCAAATGGACAAATCTCCCAATAACACTCCACACAACTCAACAACGCCTGCCGTACAACCACACGGCCAGCCGCCAGCAGTAGATGCTGCTAAGCTAAAGGAGTACCAGGAAATGATCCAGACTCTTCGAGTAGTTGACCTACACAAGATTCTTCAGTTTTGCAGTTTATCGGTAGCAGGAAGGAAACACGAACTTCAGCTGCGCGTTGTCAATTTGTTAAAGACAAACTTTGATCTGATTTCGGCTAAGTTACGCGAAATCTACCGAAGCACATTAACTGATTTCTATCCCGATACAAACGTTCAATACGGACCGACCGAGCCTAAGAGAATGTTTTCGCACATGCAGATGCCCACGGTGCAGTCGTCGGCGGAAGTACGCTCTGCTATGGTCAGCGTGGGCAATGTaggcggtggtggtggcggcggcggcggcggagtACCCGGCAACATGGGTGTCCCATTCCAACATGCAATTGGATCGTCAATGCCAATACATCCGGATGTGCGTCTTAAAAAGTTGGCATTCTACGATGTGCTGGCGACCCTCATTAAACCATCATCATTGCTACCGCGCACCAATCAACGCATACAGGAGGTCCCCTTCTATTTCACACTGACGCCCCAGCAGGCCACAGAGATTGCAACAAATCGTGACATTCGCAACGGCTCCAAGGTGGAACATTCAATACAGGTGCAACTAAGGTTCTGCCTGCTGGAGACATCGTGTGAACAAGAGGACTGTTTTCCATCGAACGTCATCGTCAAAGTCAATAACAAGCTTTGTCCATTACCTAACCCCATTCCAACAAACAGGCCAAATGTTGAGCCAAAGAGACCACCGCGACCGGTCAATGTCACATCGAATGTTAAACTCTCTCCCACCGTAACAAATACGATAATCGTGCAGTGGTGTCCGGATTTCACACGGGGCTACTGCCTGGCCGCGTATTTGGTAAAGAAGCTAACATCGGCACAATTACTGCATCGCATGAAGACTAAAGGTGTCAAACCGGCTGACTATACAAGGGCATTAATTAAGGAAAAACTAACAGAAGATGCCGACTGTGAGATTGCCACAACAATGCTAAAGGTCTCGTTGAACTGTCCGCTGGGCAAGATGAAGATGTCCATCCCATGTCGCGCTTCGACCTGTATGCATTTACAATGTTTCGATGCAAATCTCTTTCTGCAGATGAATGAGCGCAAACCGACATGGAATTGTCCGGTCTGCGACAAGCCAGCGATCTACGATCATTTGGTTATCGATGGGTATTTCCAAGAGGTTTTGGCTTCGTCGTTGCTGGGATCGGAAGATACCGAAATTCAGCTGCACAAGGACGGTTCGTGGAGTACGCATAATTTAAGGAACGAAACACAGCTGGTGGATACACCATCCAAACCTGTGGAGAAGgtggaagttatttcagatgaCATTGGTGAGTTGGTTTGGTGGGGGATATTTATCTAA
- Protein Sequence
- MRKTRSQTQAENGTAPRGPTSSHAATSAVSVHQNQMDKSPNNTPHNSTTPAVQPHGQPPAVDAAKLKEYQEMIQTLRVVDLHKILQFCSLSVAGRKHELQLRVVNLLKTNFDLISAKLREIYRSTLTDFYPDTNVQYGPTEPKRMFSHMQMPTVQSSAEVRSAMVSVGNVGGGGGGGGGGVPGNMGVPFQHAIGSSMPIHPDVRLKKLAFYDVLATLIKPSSLLPRTNQRIQEVPFYFTLTPQQATEIATNRDIRNGSKVEHSIQVQLRFCLLETSCEQEDCFPSNVIVKVNNKLCPLPNPIPTNRPNVEPKRPPRPVNVTSNVKLSPTVTNTIIVQWCPDFTRGYCLAAYLVKKLTSAQLLHRMKTKGVKPADYTRALIKEKLTEDADCEIATTMLKVSLNCPLGKMKMSIPCRASTCMHLQCFDANLFLQMNERKPTWNCPVCDKPAIYDHLVIDGYFQEVLASSLLGSEDTEIQLHKDGSWSTHNLRNETQLVDTPSKPVEKVEVISDDIGELVWWGIFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672553; iTF_00671894; iTF_00673175; iTF_00689101; iTF_01396164; iTF_01522260; iTF_01116838; iTF_01045146; iTF_00241844; iTF_00315613; iTF_00311478;
- 90% Identity
- iTF_00315613;
- 80% Identity
- -