Cver001037.1
Basic Information
- Insect
- Cheilosia vernalis
- Gene Symbol
- gata3
- Assembly
- GCA_949126925.1
- Location
- OX421358.1:14655155-14662727[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.14 6.4e+02 0.9 0.6 11 26 421 435 408 443 0.81 2 2 3.4e-17 1.6e-13 50.8 5.9 1 34 468 500 468 502 0.97
Sequence Information
- Coding Sequence
- ATGGAAGGTCAGCAACAAcaccagcaacagcagcaacaacccATCGATCTAATTACTGAAATCAAAACAGAGCCCCTCAGTGAGCAAGTACCGTCCCGGACACCAACGATTGAAGAACAGCATCAACaggagcaacagcagcagcaacaacaacagcaacaacaacagcagcaacaacaacaacaacaacagcagcaacaacaacatcaacaacaacagcagcagcaacacttacagcagcagcatcagcaacaaCTCCAACAGGAacatcagcagcaacagcaacgcAAGGATAACGCGCTGAATGTATCTAGGCTCTTGCGTGGCGACCTAATCGATCAATCGTCAGGACCAATTGTGCGAACCCAACAGCGACGCATTCTGACAACATCTGGGACTCTGAGAGAAGTGAGCGATCCGGTGCGAGACGCCGACGCCGATTCAGACTACAACAGCCATCAGCACTCTCCCTCGGACTTTGTTCAAATGACCCCGCGCTCAGAGGAGTCCACCACCGTCTACACCTACGAGACAACCCCCACGGGAACCGCTCTAATCGCATGCGAAAATCCAGCAATCAAGATCGAATCGCTGGAAAaggagcaacagcaacagcagctgCACCAGCAAACCGATCAGCCAGCAGCTGGTGCGACAGCAGTTTTCACCGAAACCGCAGTAGTTTCAGCTGCAGCGCTGCAAAACCATCACAGCCAGCATACGCAACATCATACCACGCTACGTGCTTACGAGGACGAACGTTTTCCAACGGCCATAGAAAACGGTGACCAAACTCAAATCATCTACTACGATGGCGGCCTGAACGGCGCCACTGTCGTCGATGCCCACAACGAGGGCAAAACCTTTACCAACCTAGGTCCCGCTGCAGGCAGTCTGCCACCTCCCGGCACCGAATACTCAGTCTCGAGCAACTACAGCGCAAACGGCTCGTATGGCTTAGCACAAACCTACAACATGACTAACGCCAATCCGCTCCTGTACAAATCGGATCCGACTTTGAGCTCGATTCGGCCCAACAGTCAGTTCCCGCTCACAGTGTACGAGAATCCCAGTGTGTCCGAGTCCTATTGGACCAACACCTCCATTGAGTTCTCCAATATTAATCCCTACAATCCGGTGATCACCGATGAATACGGTTCGCCGAATGGCGGCTCTTGGGTGCAATCGGCAGGCGGCTCCAGTGTCACATCCGCCTTCGATCCGAATGGTGCCGATTTAAAGTGTCAATACTGTGGCAGTCAACTGATTCGAAAGGACAATAACGAGTACATCTGTACATCGTGCTCGGCATCGCGTATGACGTATGGGACGCGGCTGCCACCGCGTCAAACCAAACCGAAGGCGTCCACTGCGAACAACAATCGACGAAATGGAGTTAGCTGTGCGAACTGCTTCACCACATCGACCACGTTGTGGCGACGCAACAACGAGAGTCAACCGGTTTGCAATGCATGCGGATTGTACTACAAGCTGCACAACATGAATCGGCCGCTTACCATGAAGAAGGAGGGCATCCAGAAGAGGAAACGCAAACCGAAGCTGACGAATGGAGCACCAATGAGGAGCCCTCTGCCAAGTATTCTTGCGCCCCAACATGCGATGTATCCGTCACAAGTCCAGAACATCGGACTACCGATGGTTTCTACACACGAGCTGCATGACATACCAAACCCGGGCAGCAACGGCACCAATCGCATCGGCATCAGCCACAACGATGTCAATTCAATAAACGTCAGCCGTCATCATCTGACATCGGAGGTGCCAACCTCAGCTGGAGAAAATCTTTCCGCGCAATACAGCTGTCAGTCGCCGTGCCAATCACCACATTTACCAAACTCCAGCACTCTCAATCGACAGATCACACAGACAGTTCCACCAATAGATGGCGGCAGATCAGTCAATGGTGAGATCACAACCAGTGTCATAACTAGTACTGGCATTCCAGAAAGGTCCTCGAATAATTAA
- Protein Sequence
- MEGQQQHQQQQQQPIDLITEIKTEPLSEQVPSRTPTIEEQHQQEQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQHLQQQHQQQLQQEHQQQQQRKDNALNVSRLLRGDLIDQSSGPIVRTQQRRILTTSGTLREVSDPVRDADADSDYNSHQHSPSDFVQMTPRSEESTTVYTYETTPTGTALIACENPAIKIESLEKEQQQQQLHQQTDQPAAGATAVFTETAVVSAAALQNHHSQHTQHHTTLRAYEDERFPTAIENGDQTQIIYYDGGLNGATVVDAHNEGKTFTNLGPAAGSLPPPGTEYSVSSNYSANGSYGLAQTYNMTNANPLLYKSDPTLSSIRPNSQFPLTVYENPSVSESYWTNTSIEFSNINPYNPVITDEYGSPNGGSWVQSAGGSSVTSAFDPNGADLKCQYCGSQLIRKDNNEYICTSCSASRMTYGTRLPPRQTKPKASTANNNRRNGVSCANCFTTSTTLWRRNNESQPVCNACGLYYKLHNMNRPLTMKKEGIQKRKRKPKLTNGAPMRSPLPSILAPQHAMYPSQVQNIGLPMVSTHELHDIPNPGSNGTNRIGISHNDVNSINVSRHHLTSEVPTSAGENLSAQYSCQSPCQSPHLPNSSTLNRQITQTVPPIDGGRSVNGEITTSVITSTGIPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314811;
- 90% Identity
- iTF_00315601;
- 80% Identity
- -