Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_949126925.1
Location
OX421361.1:55218496-55256513[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.6e-49 1.8e-44 151.0 2.2 2 116 55 167 54 167 0.98
2 3 0.53 1.7e+04 -3.7 0.0 17 42 990 1014 984 1021 0.77
3 3 0.073 2.3e+03 -0.9 0.2 68 105 1826 1864 1820 1869 0.77

Sequence Information

Coding Sequence
ATGTCTTTTTGCTCGCAATCACCTCTGAGCTCTGAAGGGAGAACTCTTCGCAAGAAAGTGAATGTTCGAGAGGGTAAACGCTTTGCCAATGAGGTTGATGGTGAACCTATTAAACTCCCGGACAACCTTGAGAGTTTACCCCGTGCTGACAGCTTTCCCTCACAGCGGCACCGGTGGAACACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGACAAACACTCCGAGTGGCAGTCGAAGGAAGTCAAAACAAGACCCAAAAGCGGATCACTCCTACTGTATTCAAGGAAGAAGGTGCGCTATCGACGCGATGGCTACTGCTGGAAGAAGAGAAAAGATGGCAAGACTACCCGAGAGGATCACATGAAGTTAAAAGTTCAGGGAACCGAAtgCATCTATGGATGTTATGTCCATTCCGCAATTCTGCCAACATTCCATCGCAGATGTTACTGGCTGTTACAGAATCCTGACATCGTGCTCGTTCACTACCTCAATGTTCCTTATCCAGACGACAACAAGATGGCTGTTATAGCGCCCAGTCTAACACTTTGGGGTGACAAGAAGGAATGGACCAAGGAAGAGTTGGTCAGTCAACTGAAACCCATGTTGTCGACGGTATTTAGTGATGAGGACTCGGATTCGGGAAACGATATTGAGATTTCCAACGCAGAGACAGTGGAATCGATAGTAAGTCAATTAATggagaaacagcgattggcacgACAGGCGGCCCTGGTGAAGCAGCTCGAATGTGGGTGCCCTGATTCGACGTGTGCCGATGGAAAGTCTTGTTCGCACCCAATGCGAAGAATTGGCATGATGAAGTCGCTCTCGGAGAAACGCAATGATGCCTACAATCAAGTGACTAGTACGACACCAAATGTACTGATTGGAACTAAGCTCTACTCACGCTGGCCAGATCGCAAAAATCGCCTTATGGCAACTGCCGAGGCAGAGCACGAGCGTCAAAGTGGGGAAATCAAATTTCAAGTTATACCGCCTCACATggaacagcaacagcagcagcaacaacaccaacagcagcagcagcatcagcaattTAACTTAACTCGCCACACACAACAAATGTTTGCTGCTCGTAATAATTTAATAGCAACCCCCACCCAGGTGGCAGGGGTTAGTGGCGCTTCTAGTGCCAATGCTGGTAACTTCAATCAACAGACCTTCGCCAATGCGTCTAATCAAAACAATCAAATGAATTTAAATCGCAATAACATGAATCAGATAGTaatcaaccaacaacaacagagTCACCTAAGCGGGGTGGGCAACAATGCAATTGCCACTACAACGGCGGTGACCACATTCTCTGCCTCTGTCGCCGCCGCCTCCAATGCTGCTGCACACAGTAGTggcaataataacaacaacagcaaccagCAATTATCGGTCCTGTCGCCTCAGCAAATTAGTTTGCAAAACTCCAATGAACGAAGTGAATTAAGTAATAATAACTCGATAAACCCCAGTCAGGGTCATATGCAACACCAATCatcccagcagcagcagcaccaccaccatcatcagcaccaccaccagcagGCACAAAAGCATGATTTAAATATGTCATTAGGAGGCAACCCATCCTCGGCATCTCAAACCGAACACCATTCattcaaacaacaacaacaacaacaccaacagcaTCATCTTCTTCGTGCGACTTTAGCATCGACCCCGTCAATCACAACCATTTCAGCAGCATCGACATCGAGCATCACCCCATCGGCCAATGTACAGCAGATGAGTAAGAGCCAGCAGCAACACCCTCATCCCCATCAGCAATTGgaccaacagcagcaacagacTCAGCACCAACTTCATCCCCATCATATGCACCACtcccagcagcagcagcagcagcagcaccaacagCAGGCGTTAATTGAAAGTAATAGCATCAATCAAGGGCAATCATCGAATCTAATTAGCAATACCTCGGATGACAATGGTAATAGCATGGGAGGTGATAGTACGGTTGGCGGAAGAGTGGGTGCCAGTGGTCAAACGAGTCAGCCAATGTCTACCGATGTCGGGGGATCCATGCTCAATTTGTCCCAGGTAAACGATTCGGAGCATATCTTGGAAGCAGAGCTCGATGGCGGCGATTCCGCCTTCCACTTGCAATCGCGTGCATCCACTTGCGGCGACACAACGGCTAGCGCTGTGATTTCATCCAACCAATCCCCGCTGATAGAGAAAAAGGAACCATCCCTGTCCGCTTCGGACCGGACAACTTCCGACGTCAGTGATTCACTGGCATTTTTCAACGAAACCTTAGATCTGTCCCAGGAGGACATCCAAAGAACTCTGATTGCGAATATGCCATTCGGCGGAGGCAGCGATGTGGCGGTGAACAGTCAACATGATAACCGTGTTGCGTCTGATCTGAATCCTATGGATTTTATTGCGAACGTCTGTGACGTTACAAATGATGTGAAACGCAACACTCGGGGAGTTGTTCATGACGAAGACGACGATGTGTTTGTGAACTTGGATGCATTCGATATGTTGGTAGAGTTTCCCGAATTGGAATTCGATGGGAAGCATGAATCCGCATCGAGTTTGTCCTTCGAGAGCAGCCTGTCGAAGGTGTTTTCGAGTGCGAATCGGCGAATTCTAACAATCAGTGACTACAGCCCGGAATGGGCCTATCCAGAGGGAGGAGTGAAGGTTCTAGTCACCGGGCCATGGAAGATGTCCAGCACGTATACAGTACTCTTTGATTCGGTGCCGGTACCGACAATTCTCGTACAGGAAGGTGTTCTTCGGTGTTTTTGTCCAGCTCATGAAGTTGGTTTGGCCACGTTACAGGTGGCCAGCGATGGTTTTGTGATTTCCAACTCGGTTATATTTGAGTACAAGTCGAGTCCACACCCAGAGGCCACTTTCGATGGCACCACCAATGATTGTCTCTACAAGTTCACGTTGTTGAATCGCTTGTCGTCGATCGACGAGAAGATGCAAATCAAGATGGAACCTAAGGATTCGCCCGAAGATGCTGCATTGATGATGCAATCGAACTTTGAGGAGCGAATGGTTAGCTATTGCCACCAGCTGACCAGCAAGCTGTGGCGATCCAATGCTCCCGTCTCCTGGTCGTCTAGCGGATTCAAGGGAATGACCCTATTGCATTTGGCGGCCGCACTTGGCTATGCAAAGCTGGTGTGTGCCATGCTCAATTGGCGGTCAGAGAATCCGAATTTTATTCTAGAAACGGAGATTGATGCTTTGAGTCAGGATGTGTATGGGTACACTCCAATGACTTGGGCATGTGCCAGAGGTCACACCGAGACGGCTTTGATTCTCTACAAATGGAATCACAACGCAATGAAGATCAAGAATCTGGCACTGCAAACTCCGCTGGATGTGGCCAAGTCGAAGGGGTTTAGGTATCTCTTGACTGAGCTGTCGCGATTGGAGTGTGAACGAGGCAGTAGCAGTGGCTCAAGCATTTCGTATGACTTGAGCAAACAGATGAAGCAGCATTGCAGTGATCTGTTGAATGGCCAAATCATTAAGGACGAGCTAGCTGGGAGCAATAATTCGGATAATTCGTCGGACAGTCAGAATACCGATGCTGGGGACATCAATAGGAGTCATGATGGGGTTTTTCTCAGACCAATCGCTGTTGCTAGCAACCAAAGTCCACCAACAAACAGTCGGTACTCGAAGAGGTCCTCTATCGACAGTGGCATCAACATGGACATGAGGTCGTTCACGAAATGCGGAAAACCTTTCAAGGATCAAAACAAGTTAACCAGTTTCGACAGTAACGACAACTACCCCCTCTCTGTGGACTCGGCCCTCGATGGCTTCTCCACACTGAACAGCTCCAGTTCGCTTCTCTCGCCGCTTCGCAAAATGGACTTTGCCTTGTGCGAAGTATCAACCGGTGGGTCTAGCCCCATTGCCGATAAGCACGACCGATCGATGTCAGACGACGAAGATGATCCTGACGTCACATGTAAAAATGAATCAGAGCCGAGCGTAGGGGAGTCCGATGCCAAGGTGTTGACGCTGGCTGAACACATAATTGCTGCGATGCCAGATAGGATTAAGAATGAATCCGATGAGATGATGATTTTGGGTAGTCCCATGTCGGAGTCGCTGCACGGGGACAACTCTGGCATTGGCAACATGCAGGACAGCTTTATGGATCCGCTGTTGGACTCTCTGCCCAATACACACTTTGACAACGACTTCAATTTCGACTTTAGCGATCATAACTATCGCTATCATGATGTGAGCACACCATGTTCGAGTTTAAGTCCAGCCAGCTCTGGACCACTACAGTCGCCGGCTAGTTACTCCATACCTCCAGATCCGCCAATGAATTCACCAAGTCCGCCACCATCGACTAAGCAACTGACGGAGTTTCTTCAGGCATCGAACAATGGCCAGCGGCCTTTTGAAGCTGATTTTTCCAAGCTCACTTTGACTGATAGCGAACAACGAGAACTGTACGAGGCTGCAAAGTGCATTCAAAAGGCCTATCGCTCCTACAAGGGTCGCCAAAAGTTGGAGGAGCAAAATAAAGAGCGTTCCGCCGCCATAGTCATTCAAAACTATTATCGTCGCTACAAGCAGTATGCATATTTCCGCCAGATGACAAATGCTGCTCTGGTTATCCAACATGGTTATCGGTCGTACTGCAAGAACAAGCGATTTAAGAAGTCACCACAGACGAACAGCCTGTCGCCGGGCAACAGTTCGAACTACAACGAAAGCTCGTCACAGTGCTTGTCGAGCTACTACTATCAACAGCAAGACATTTCCCAACCAAGTACGCCGAAGGAAACCAGTCCATCGGGCCCGTTGAAGCGAACCTATTCCCAGTCAACGCAAAATCAAGCTGCCAGGAAAATTCAACAATTTATGAGACAATCGAAACTAAAACTTCAGAGAGAACGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGAGGAATACCTCCAAAGCTTGCAGTATCAAGAGCAACTGGAAATTGCGCACAATCAAGAACAAAGAACATTTAGGGTGAAGATTGCAAACATAGTCAGCGAGGAGAAGAAGAGCATCTATGGCGTTCCACAAGGGTCCAAACTGGGCCCTATATTGTTTGTTCTGTTCACAAACGAACTTCTTCGTGTTTTTGAACAATCTACTGCATTTGCATACGCAGATGACATTGCTATAGTGGTCAAACATCAACAACTCGAAACGGCGATTGCAATAATGCAGAAGGAATTCGACAAAGTGTCAAGATGGTGCCACGATCACAACTTGGTGATAAACTCGGAGAAGACAAAGCTGATACACATACGCACACCGAACCAAAGAACGGCAGATATAAATATCTTTCATCAAAATGAAAGCTGTCCAACCACACATAGGTGCGAAGCAATTGAGGTCGTCAAATCTATCAAGTATTTAGGTATAACCATCGACGAGCATTTCATTTGGCACGAACACATTCAGCGTTTGCGCTTGCAGTTAAAAAGTGCTGTTTTTGCGATGGTTTATCTGAAGAAGTACACTACAACAGATGTCCAAAGGCAAGTGTACTACTCACTGGCTGAATCGAGAATTCGGTACGGCATTTTGGCTTGGGGAAATGCATCGAAAACGCACTTGGACAAAATACATAACCTCCAACGACGTCTGATCACTTCCCCGGAGAGCACTAATCTGAATCACATATACCTGCTGTTGTTGCAATGCACACCTCGTCTAAGATGCGCACACACCAAGCCACTTCCACCTCCGCCGCCAGGCCAGATGCTGTCCAAAAGTGATGACAAGAAAATCACATTAGGCTCTGATTAA
Protein Sequence
MSFCSQSPLSSEGRTLRKKVNVREGKRFANEVDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSLTLWGDKKEWTKEELVSQLKPMLSTVFSDEDSDSGNDIEISNAETVESIVSQLMEKQRLARQAALVKQLECGCPDSTCADGKSCSHPMRRIGMMKSLSEKRNDAYNQVTSTTPNVLIGTKLYSRWPDRKNRLMATAEAEHERQSGEIKFQVIPPHMEQQQQQQQHQQQQQHQQFNLTRHTQQMFAARNNLIATPTQVAGVSGASSANAGNFNQQTFANASNQNNQMNLNRNNMNQIVINQQQQSHLSGVGNNAIATTTAVTTFSASVAAASNAAAHSSGNNNNNSNQQLSVLSPQQISLQNSNERSELSNNNSINPSQGHMQHQSSQQQQHHHHHQHHHQQAQKHDLNMSLGGNPSSASQTEHHSFKQQQQQHQQHHLLRATLASTPSITTISAASTSSITPSANVQQMSKSQQQHPHPHQQLDQQQQQTQHQLHPHHMHHSQQQQQQQHQQQALIESNSINQGQSSNLISNTSDDNGNSMGGDSTVGGRVGASGQTSQPMSTDVGGSMLNLSQVNDSEHILEAELDGGDSAFHLQSRASTCGDTTASAVISSNQSPLIEKKEPSLSASDRTTSDVSDSLAFFNETLDLSQEDIQRTLIANMPFGGGSDVAVNSQHDNRVASDLNPMDFIANVCDVTNDVKRNTRGVVHDEDDDVFVNLDAFDMLVEFPELEFDGKHESASSLSFESSLSKVFSSANRRILTISDYSPEWAYPEGGVKVLVTGPWKMSSTYTVLFDSVPVPTILVQEGVLRCFCPAHEVGLATLQVASDGFVISNSVIFEYKSSPHPEATFDGTTNDCLYKFTLLNRLSSIDEKMQIKMEPKDSPEDAALMMQSNFEERMVSYCHQLTSKLWRSNAPVSWSSSGFKGMTLLHLAAALGYAKLVCAMLNWRSENPNFILETEIDALSQDVYGYTPMTWACARGHTETALILYKWNHNAMKIKNLALQTPLDVAKSKGFRYLLTELSRLECERGSSSGSSISYDLSKQMKQHCSDLLNGQIIKDELAGSNNSDNSSDSQNTDAGDINRSHDGVFLRPIAVASNQSPPTNSRYSKRSSIDSGINMDMRSFTKCGKPFKDQNKLTSFDSNDNYPLSVDSALDGFSTLNSSSSLLSPLRKMDFALCEVSTGGSSPIADKHDRSMSDDEDDPDVTCKNESEPSVGESDAKVLTLAEHIIAAMPDRIKNESDEMMILGSPMSESLHGDNSGIGNMQDSFMDPLLDSLPNTHFDNDFNFDFSDHNYRYHDVSTPCSSLSPASSGPLQSPASYSIPPDPPMNSPSPPPSTKQLTEFLQASNNGQRPFEADFSKLTLTDSEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERSAAIVIQNYYRRYKQYAYFRQMTNAALVIQHGYRSYCKNKRFKKSPQTNSLSPGNSSNYNESSSQCLSSYYYQQQDISQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSKLKLQRERAEKEKLVHQRREEYLQSLQYQEQLEIAHNQEQRTFRVKIANIVSEEKKSIYGVPQGSKLGPILFVLFTNELLRVFEQSTAFAYADDIAIVVKHQQLETAIAIMQKEFDKVSRWCHDHNLVINSEKTKLIHIRTPNQRTADINIFHQNESCPTTHRCEAIEVVKSIKYLGITIDEHFIWHEHIQRLRLQLKSAVFAMVYLKKYTTTDVQRQVYYSLAESRIRYGILAWGNASKTHLDKIHNLQRRLITSPESTNLNHIYLLLLQCTPRLRCAHTKPLPPPPPGQMLSKSDDKKITLGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00310245;
90% Identity
iTF_00313469;
80% Identity
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