Basic Information

Insect: Cheilosia vernalis
Gene Symbol: ct
Assembly: GCA_949126925.1
Location: OX421360.1:10446091-10489220[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.3e-26 2.1e-22 79.7 0.0 3 71 781 850 779 856 0.94

2 3 5.3e-32 8.5e-28 97.0 0.0 3 77 1209 1284 1207 1286 0.96

3 3 6.9e-31 1.1e-26 93.4 0.0 3 77 1422 1497 1420 1499 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.3e-26	2.1e-22	79.7	3	71	781	850	779	856	0.94
2	3	5.3e-32	8.5e-28	97.0	3	77	1209	1284	1207	1286	0.96
3	3	6.9e-31	1.1e-26	93.4	3	77	1422	1497	1420	1499	0.96

Sequence Information

Coding Sequence: ATGCACAGGACAGCGCGCGAAAACGGGGTTATCCGCTATCCTGCTGGTGTTGCCGCCGCCAGTGACCTTGAAATTGGGAGGGCTACTTTGGCTGAAAAGGAAGTTAACACTTTGAAGGAGCAATTGTCAACAGTTTCGACCGCAACCACAACAACTTCAACGTCTTCgaccacaacaacaacagcgtCTTCGATACATTCGTCGCCACCGTCTCCGTCGTCGGCGAACACAACACCCATACCAAATATCAAACTATCACCAACgataaacaacaacagcagtttcagtaacaacaataacaacaacaacaacaaactaaACAGTGTTGCCATATCACAGCATCTGCACCAGAACGGAAATTTGCTGGCGGCAACACCGTCGCCGTCCCCACCATTGTCCGAGAACGGCAGCACACTGAACGGTTGCCTCAACTCGGTGGCGGCTAAATTGCTCTTCAATCATAATCAAATAATGGACACAACCGGATCGGGCACACCGACCGACGTGGTAACGACAACCACTGCGCAGCACAGCGGTCCCGCAACCGATGCTAGCAAGCTCATAACCGCGATGACCGCCGAAATGAATCTCCACCAAGACTCCAGCGAATCGGCAACCCTGGCGAGCAATCAAATATCAAACCAGTCGCACAGCCCCCTCCTCTCAATGGAGGGCAGTGGCCACGAGGCAACGcgaaacaacaataacaataatagcactagtaacaataataacaatacaAATAGTAATAGCAGTAGTagttgtaataataatttaGCTGATGAATTGGCTGCCAAAGAGAAAGAGATTAAAGCACTTATCGACGAGGTTAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTGGAAGCGAAGCGTCAACACATTCTGAGACTGGAGGATCGCCTGGAGAAGCAGCAGTTCCCCGCAGTGCCGCAGAAACCAAGTCCGGACTTGTACCGTGAGGATGGCGACCAACATGCGGCATCAGCTGCTGTGGCCGATTCGCAACCGCAACCACCCTTGCCACCGCCGCCACCAGCAGCTCTGCCGGAGGAGGTGGTTCACATCAAGACGGAAACTCAACcgccaacagcaacagcaatagCACCAACAATCGACATCACGGCTGCTGCGAGCGACCCCAAGCAGTTCCAGGAACTTTTGCTCGAGCGAACAAAGGCGCTGGCGGCCGCCGTTGCCCAGACCTCCAGCGAGTCGACACTGAAAGCCGAAGGAAGTTGCAGTGATTCGATTGCAGGGGAGACCTGTAATGAGCCGCCTGCAGCCTGTGTGGTCCTTGATAGCGACCCGAACGAGTCGAATCAGCAACAGCAGGAGGCGAGACCACCATCGGAAGCGGGGTCGGTCGAGCAAATTGCGTCCTCGAACTTCGCAAGTGTCGATCAGTTTGGTTCGCTGCTGGGCGGTGAGCTGGTGAACTCGTATTGGCGTCGTGGCTTTGATTTGTCTGCGGAACTTAAGTTGCCGCCTCCGCCGCATCACCTGCCGTTAGCGCCACCACTTGTGATGCCAACGCAACAGCCATCACCGGCAGTAGCCGCCGTTTCGATAGCACACCCACCACCGCCGCCGCTACCATCAATAGCTACGACAAATCCAAACTCTAAGACGCCAACATCGATTTTCCAAAATTTCTCATCAATCCTTTCGTGCCGATCGCCTCCACCACTCTCGATGGCCGCTGCTGGACCATCAACCACCACTCTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCCAATTCAACTCCTTCTCTTCGAACAGATAACCATCCttcgttgttgtcgtcgtcatcgtcgtcgtcgaccGCAACCACGGGCAACCACCTGCACCAGTCttcacagcagcagcagcagcaccacccccaccaccaccacctccaTCATCAGCACCCACTTCAGCATCAGCATCCTGCCCTACAACATCAACAGCACCAGGACTACGAGAAGGCAAACAGCCATCACGACTCGTCATCAACGGCGAGCACGCCCAATCTGCAGGACCAGCGCTCCAACGACGGCCACCTAAACGGCGCCAAGTCGGCCAAGGCAGCCCTTGAGGACAACAACAACTCGTTGGGATCGTTGGCACATTTACCGCCAGCATTCCTGCCAGGCCTGCCATTCCAATTCCAAGATCGCGGTCATTTCCGTTTCGCCGAAGATATCCAGCTGCCGCCCGGCGCCTCGATGGCCGGCCGCCTCGGAGAGTCGCTCATACCCAAGGGCGACCCGATGGAGGCCAAGCTCCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAATCAAAGTCTCGACACTCTTCACATATCACGCCGGGTGCGCGAACTTCTCTCCGTGCACAACATCGGACAGAGGCTCTTCGCCAAGTACATCCTCGGACTGTCGCAGGGCACCGTCTCCGAGCTGCTGTCCAAGCCAAAGCCCTGGGATAAATTGACTGAGAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTAATGCTCCTAAAGTCGCTGATACCCAAAAAAGACTCGGGCATGCCGCAGTACGGGCGCAATGAGGACTCCATGTCGGACGACCGCATTGCACACATCTTGAACGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGACCAGGTGCACAGCTGCAGCAGCAGCTGCAGCACGAGGCGCAGCGTCAGCACCAGCAACAGCACTCGTCCTCGCTGGACGACTCGCAGCACAGCAACGAGGACTCCAAGTCGCCGCATGCGTCGTGCACTTCGCCATTCTACAAGGAATCACcagtgcagcagcagcagcaacagcagcagcagcagcagcagcaacagcaacaacagcagcagctgcTGCGACGAGACGAGGCACAGCGGCGGAGCGTGAAGCCCGATGAGATGTCCCAGGACAAGATGGCGCGCATATATCAGGAGGAGCTGGCAAAACTGATGACGCGCACACCACGCGACACGTTTCCAAGTGCGGCTGGTGGCCTCCCGCCCGCCAACAGTGCGATGCCACCCGACGACAACATTCGCATGGCCTTCGAGGCCTACCACCGTGAAATGGCCAAGCTGCAGCAGAACAACAGCGGCAACATGCCCAGCTTCCCGAACTTCTCCAGCCTGATGGCCCTGCAGCAACAGGTGCTAAACGGCGCACAGGACCTGTCCGTGCCGAAGGAGAACGAAATGAAGTTGAACGGGCAGCGCAACTCCATGGAGAGCTGCGATATGAATCAAACCAAAGAAGCCAACGACGAGGCCGTTCTGCGTCACTCAAGTGCATTTAGCTTAGTTCGAAACAAACCGGACACCACACCAGCACCGAGTTCCAACTCGAACCCCAACACAAACTCAGCCGCTCCCAGTCCACTCAGCAATTCGATTCTGCAGCCGGCTATGACGCCGACTGAGGACTTCTCCACAGCGGCCAGTCCACTGCAGCGAATGGCGTCGATCACCAACTCCCTGATCACGCAGCCGCCGGTGACGCCTCACCACACCCAGCCGCAGAGGCCGACGAAGGCCGTGCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACTTGAACACAGAAGACATTGTGCGCCGAGTGAAAGAAGCCCTTTCGCAGTACTCCATCAGCCAGAGGCTGTTCGGCGAGTCAGTTCTGGGGCTGTCGCAGGGATCCGTGTCGGATCTGCTCGCGAGACCCAAGCCCTGGCACATGTTGACCCAGAAGGGCCGAGAGCCGTTTATTCGCATGAAGATGTTTCTCGAGGACGACAACGCCGTGCACAAGCTGGTGGCCAGCCAATACAAGATTGCGCCTGAGAAGCTGATGCGCACCGGCAGTTACAGCGGCAGCCCGCAAATACCCCAAGGCCTTGCCAACAAGATGAACAGCATTCCAATGCAGAAGATGATGAACGAGCTCAAGATGCAAGAGCCACAGGCGCAGCATATCATGCAGCAGATGCAGGCTGCGTCCGCTATGGCAGCCGCCGCCGCTGCCGGCCACATGCAAAACGCCCAGCACCAGGGCATGCTGCTTACCACTCCCGGACTTCCGCCACAGCACGCCATAAGCCTGCAGCAAGCCGCCAACGAGAAGAAGCCCATGATGATGCCCATTCACTCGCCGCATCAGGCCAATGTCATGCGGAGCAGTATGCACCAGCACATGTCGCCGACGGTGTACGAGATGGCGGCTCTCACACAAGACCTCGACACGCAGGTGATCACAACCAAGATAAAGGAGGCGCTGCTGGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGTTGGGGTTGTCGCAGGGCTCCGTCTCGGAGCTTCTTTCGAAGCCGAAACCCTGGCACATGCTCAGCATAAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTTTCCGATGCCAACAACGTCGAGCGGTTGCAGGTACTTAAGAACGAACGTCGCGAGGCCAGCAAACGTCGTCGCTCCACGGGCCCCAACCAACAGGACAACAGCTCCGACACCAGCAGCAACGATACCGCCGACTTCTACACCAGCAGTCCCGGACCAGGGTCGGTCGGTTCCGTCGGCGCACCGCCCAACAAAAAGCAGCGCGTCCTCTTCTCCGAGGAGCAAAAGGAAGCCCTGCGCCTGGCCTTCGCCCTCGATCCCTACCCCAATGTGGGCACGATTGAATTTCTCGCCAACGAACTGGGCCTGGTAACGCGCACCATCACCAACTGGTTCCACAACCACCGAATGCGCCTTAAGCAACAGGTGCCGCACGGCCAGCCCACGGAACCGGTGCCCAGTCGAGAGAACACCAACGGAACTCCCTTCGATCCCGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTACAGAAAGAGCGCATGGGACTTAGCGGCGCACCGATCCCCTACCCACCGTACTTCGCCGCCAACCCCAACCTCGCGGCACTCATCGGTCGCGGCCTCCTCCCCGGCGGCGGCGAACCCGATCTGCAGGCCCTCAACAACGCCTTCAAGGAACAAATGAGCGGCCTCGATCTGTCCCTTAAGCGGGAGCGCGACGATGACTTCGAGGACGACGGCGAGGGCGACAGCCACCTCTCCGACAACGAGTCCATCAACGGCAGCGACGAAAAGTCCGAAATGAGCGAAACACCCCGCTCCTCCCTGTCCGGAACTGGCATGCAATCGCGAACATCCAGGCGCAAGCCGGCCGCCCCCCAATGGGTCAACCCCGACTGGCAGGGCGACGGCAAATCCGGTGGATTAATGCCGCCAATGCCGATCGGCGCCACCGACAAAGAGGTCATCATCAACGGCGTCTGCGTCATGCAGCAGCAGGCTGCCGACTACAGTCGCAAATCGACCAACGcagacgacgatgatgacgacgatgacgccTCCGATGCCAACGACGACGAACCATCTGCCCATCACCGCACCCAGTCATCGGACTGCGACGACCCACCCGCCGACATCGATCAGCGATTCATGGAGCCCGAGGTCCGAATCAAGCAAGAAGAAGACTGCGACAGCAACGACAGCCATCAGGACGATCATGATTCCGACCCCCGGAAGCCCCCACACCACCGGGACGACGAGGACGACACCCCCGGCGCTTGGAACTACTAA
Protein Sequence: MHRTARENGVIRYPAGVAAASDLEIGRATLAEKEVNTLKEQLSTVSTATTTTSTSSTTTTTASSIHSSPPSPSSANTTPIPNIKLSPTINNNSSFSNNNNNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSVAAKLLFNHNQIMDTTGSGTPTDVVTTTTAQHSGPATDASKLITAMTAEMNLHQDSSESATLASNQISNQSHSPLLSMEGSGHEATRNNNNNNSTSNNNNNTNSNSSSSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHILRLEDRLEKQQFPAVPQKPSPDLYREDGDQHAASAAVADSQPQPPLPPPPPAALPEEVVHIKTETQPPTATAIAPTIDITAAASDPKQFQELLLERTKALAAAVAQTSSESTLKAEGSCSDSIAGETCNEPPAACVVLDSDPNESNQQQQEARPPSEAGSVEQIASSNFASVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPPHHLPLAPPLVMPTQQPSPAVAAVSIAHPPPPPLPSIATTNPNSKTPTSIFQNFSSILSCRSPPPLSMAAAGPSTTTLLSQLVNSTFSSNSTPSLRTDNHPSLLSSSSSSSTATTGNHLHQSSQQQQQHHPHHHHLHHQHPLQHQHPALQHQQHQDYEKANSHHDSSSTASTPNLQDQRSNDGHLNGAKSAKAALEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGAQLQQQLQHEAQRQHQQQHSSSLDDSQHSNEDSKSPHASCTSPFYKESPVQQQQQQQQQQQQQQQQQQQLLRRDEAQRRSVKPDEMSQDKMARIYQEELAKLMTRTPRDTFPSAAGGLPPANSAMPPDDNIRMAFEAYHREMAKLQQNNSGNMPSFPNFSSLMALQQQVLNGAQDLSVPKENEMKLNGQRNSMESCDMNQTKEANDEAVLRHSSAFSLVRNKPDTTPAPSSNSNPNTNSAAPSPLSNSILQPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAANEKKPMMMPIHSPHQANVMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLVTRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNGTPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGTGMQSRTSRRKPAAPQWVNPDWQGDGKSGGLMPPMPIGATDKEVIINGVCVMQQQAADYSRKSTNADDDDDDDDASDANDDEPSAHHRTQSSDCDDPPADIDQRFMEPEVRIKQEEDCDSNDSHQDDHDSDPRKPPHHRDDEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00976241;
90% Identity: iTF_00314056;
80% Identity: iTF_00315833;